Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966642

Identifier: 123966642

GI number: 123966642

Start: 1248060

End: 1248992

Strand: Direct

Name: 123966642

Synonym: P9515_14091

Alternate gene names: NA

Gene position: 1248060-1248992 (Clockwise)

Preceding gene: 123966641

Following gene: 123966644

Centisome position: 73.24

GC content: 25.08

Gene sequence:

>933_bases
ATGGAAACTATTTGTCCCATCTGCAAAAAAAATAATTTGGTAAAAGTAGTATCTAATTGTAAAGAAAACATCCGTCTAAC
TGAAAAATCTTATTCATATGTAAAATGCCTGAATTGTAAAATTATAAGTCTATTTCCAACTCCTGATATCTCAACTATTT
CAAACCATTATCAATTTTTAAATAAAGAAAAAGAGAAAAATATTTCAAATAAAAAAACATTAGCCCTTCTTTTTAAGATT
AAAGATTATTATCAGAATACAAAAAATATAAAAAATATCCTAAGAAATATTTTGAAATTTGGGGAAGAAGACTTTCCATA
TTTAAATCGGCTGAGAGGAAAAAAAATTCTTGATCTAGGAGCTGGCAATGGTTTTTTTTCATTAGCAGCAAAAGAAAAAG
GTTTTAATGTGATTTCTATAGAACAAAATAAAAGCTCAATTAATTTTGCTAAAAGTATTGGTATAAAAATGATCGCAAGT
GATATAAGCTCAAAAATATCTATGGAATACGCTTCAGTTGTTGATAATGTTATATTGAATCACGTTTTTGAGCATATTCT
TGAGCCCTTTAATTTCTTATCTATTTTAAGGAATAACATATCAAATCATACTAAAGTTGTTTTGTTTATTCCTAATGCAA
ATTCTATTTGGAGGTATATTTTTAAGGAAAAATGGTATGGTTGGGACCCACCTATTCATGTGCACTTATATAATAAGAAA
TCTTTAGAATTAATTATAAGTAATTCAGGTTTTAAAGTTGAATATTTATCTACAATAAATCGTATTGATTCACTTTATGC
TGCTTTAATACATTCAGGCAAAAATCCAAGAAATCTAAAATTGATTTTGAGATTTGTTAGCTTTATAATTCAACCAATAT
TAAAAATATTTAATTTAGCACCTGAATTATTATGTATTATTTCTAAAAAATAG

Upstream 100 bases:

>100_bases
ATTTTCTAAGAAAATAAGAATTTTGTTTTAAACATCATTAAGATTTTTATAGAATTTTTTATTAATATAGAGGAATATTA
GTTTTGCCACCAATATATTA

Downstream 100 bases:

>100_bases
ATCAGAATAATATAATAATTCTTATGATTGATACTAAAAATTTTGAAATATTTAGAACCAAAATCAGTCTAAAAAATCAT
AAAATATAATTCATTACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Methyltransferase; SAM-Dependent Methyltransferase

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
METICPICKKNNLVKVVSNCKENIRLTEKSYSYVKCLNCKIISLFPTPDISTISNHYQFLNKEKEKNISNKKTLALLFKI
KDYYQNTKNIKNILRNILKFGEEDFPYLNRLRGKKILDLGAGNGFFSLAAKEKGFNVISIEQNKSSINFAKSIGIKMIAS
DISSKISMEYASVVDNVILNHVFEHILEPFNFLSILRNNISNHTKVVLFIPNANSIWRYIFKEKWYGWDPPIHVHLYNKK
SLELIISNSGFKVEYLSTINRIDSLYAALIHSGKNPRNLKLILRFVSFIIQPILKIFNLAPELLCIISKK

Sequences:

>Translated_310_residues
METICPICKKNNLVKVVSNCKENIRLTEKSYSYVKCLNCKIISLFPTPDISTISNHYQFLNKEKEKNISNKKTLALLFKI
KDYYQNTKNIKNILRNILKFGEEDFPYLNRLRGKKILDLGAGNGFFSLAAKEKGFNVISIEQNKSSINFAKSIGIKMIAS
DISSKISMEYASVVDNVILNHVFEHILEPFNFLSILRNNISNHTKVVLFIPNANSIWRYIFKEKWYGWDPPIHVHLYNKK
SLELIISNSGFKVEYLSTINRIDSLYAALIHSGKNPRNLKLILRFVSFIIQPILKIFNLAPELLCIISKK
>Mature_310_residues
METICPICKKNNLVKVVSNCKENIRLTEKSYSYVKCLNCKIISLFPTPDISTISNHYQFLNKEKEKNISNKKTLALLFKI
KDYYQNTKNIKNILRNILKFGEEDFPYLNRLRGKKILDLGAGNGFFSLAAKEKGFNVISIEQNKSSINFAKSIGIKMIAS
DISSKISMEYASVVDNVILNHVFEHILEPFNFLSILRNNISNHTKVVLFIPNANSIWRYIFKEKWYGWDPPIHVHLYNKK
SLELIISNSGFKVEYLSTINRIDSLYAALIHSGKNPRNLKLILRFVSFIIQPILKIFNLAPELLCIISKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35756; Mature: 35756

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METICPICKKNNLVKVVSNCKENIRLTEKSYSYVKCLNCKIISLFPTPDISTISNHYQFL
CCCCCCHHCCCCCHHHHHHHHHCCEECCCCCCEEEEECEEEEEEECCCCHHHHHHHHHHH
NKEKEKNISNKKTLALLFKIKDYYQNTKNIKNILRNILKFGEEDFPYLNRLRGKKILDLG
CCHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEC
AGNGFFSLAAKEKGFNVISIEQNKSSINFAKSIGIKMIASDISSKISMEYASVVDNVILN
CCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HVFEHILEPFNFLSILRNNISNHTKVVLFIPNANSIWRYIFKEKWYGWDPPIHVHLYNKK
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCC
SLELIISNSGFKVEYLSTINRIDSLYAALIHSGKNPRNLKLILRFVSFIIQPILKIFNLA
CEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PELLCIISKK
HHHHHEECCC
>Mature Secondary Structure
METICPICKKNNLVKVVSNCKENIRLTEKSYSYVKCLNCKIISLFPTPDISTISNHYQFL
CCCCCCHHCCCCCHHHHHHHHHCCEECCCCCCEEEEECEEEEEEECCCCHHHHHHHHHHH
NKEKEKNISNKKTLALLFKIKDYYQNTKNIKNILRNILKFGEEDFPYLNRLRGKKILDLG
CCHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEC
AGNGFFSLAAKEKGFNVISIEQNKSSINFAKSIGIKMIASDISSKISMEYASVVDNVILN
CCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HVFEHILEPFNFLSILRNNISNHTKVVLFIPNANSIWRYIFKEKWYGWDPPIHVHLYNKK
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCC
SLELIISNSGFKVEYLSTINRIDSLYAALIHSGKNPRNLKLILRFVSFIIQPILKIFNLA
CEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PELLCIISKK
HHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA