| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966531
Identifier: 123966531
GI number: 123966531
Start: 1138634
End: 1139152
Strand: Direct
Name: 123966531
Synonym: P9515_12981
Alternate gene names: NA
Gene position: 1138634-1139152 (Clockwise)
Preceding gene: 123966530
Following gene: 123966532
Centisome position: 66.81
GC content: 34.49
Gene sequence:
>519_bases TTGAAAGGATATAAGCATATCGATTACTCTTCTTACGACCACATTGACCATAAACAACCTATCTACCCCTTGCCATTTAT TAAAGATTCAAGTGTAGATGAGATTTATTGCTCTCATGCATTGGAATATTTTGACTACAACGAGGGAATCAAAGTATTGA ATGAATGGAAGCGCTGCTTATCCGAGGGTGGAATTTTAAGATTGTCAGTCCCCGATTTTGATCAGTTGATCAAAGTCTAC GAACAGAATAATAACGACATAAACTCAATTATTGGTCCTGTATTTGGTCGTTGGGAAGTAGAAGAAAATAAATTTATATT CCATAGAACAGTTTACACAAGACAGAAATTATTACAGGCTTTAGAAAAGGTTGGTTTCAAAGAAATATGTGACTGGGATC CATTAGAATTTCATGGATGTGAGTCAAACAGTTTCGACGATTATTCAAAGGCTTATTTTCCCCATATGGATTTTGCAAAA GGCTTTCCAATTAGTCTTAATATTCTTGGAAAAGTCTAA
Upstream 100 bases:
>100_bases TCCAAAATTAATATTCAGCATTTATCTTATTTGCTAGGTTTTAATTAAATAAATAGTCCTAATTATGTTAAAGCTTCATT TAGGCTGCGGGAAGAGGTAT
Downstream 100 bases:
>100_bases ATTACTTATGCAAGTAATTTTTAGTTTATTATTCCTTAATTAACTTTGATTGAAAAGGAAGTTAGCAAAATACTATATTT ATTTATTTTATTATTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKGYKHIDYSSYDHIDHKQPIYPLPFIKDSSVDEIYCSHALEYFDYNEGIKVLNEWKRCLSEGGILRLSVPDFDQLIKVY EQNNNDINSIIGPVFGRWEVEENKFIFHRTVYTRQKLLQALEKVGFKEICDWDPLEFHGCESNSFDDYSKAYFPHMDFAK GFPISLNILGKV
Sequences:
>Translated_172_residues MKGYKHIDYSSYDHIDHKQPIYPLPFIKDSSVDEIYCSHALEYFDYNEGIKVLNEWKRCLSEGGILRLSVPDFDQLIKVY EQNNNDINSIIGPVFGRWEVEENKFIFHRTVYTRQKLLQALEKVGFKEICDWDPLEFHGCESNSFDDYSKAYFPHMDFAK GFPISLNILGKV >Mature_172_residues MKGYKHIDYSSYDHIDHKQPIYPLPFIKDSSVDEIYCSHALEYFDYNEGIKVLNEWKRCLSEGGILRLSVPDFDQLIKVY EQNNNDINSIIGPVFGRWEVEENKFIFHRTVYTRQKLLQALEKVGFKEICDWDPLEFHGCESNSFDDYSKAYFPHMDFAK GFPISLNILGKV
Specific function: Unknown
COG id: COG4627
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20245; Mature: 20245
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGYKHIDYSSYDHIDHKQPIYPLPFIKDSSVDEIYCSHALEYFDYNEGIKVLNEWKRCL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SEGGILRLSVPDFDQLIKVYEQNNNDINSIIGPVFGRWEVEENKFIFHRTVYTRQKLLQA HCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHHHH LEKVGFKEICDWDPLEFHGCESNSFDDYSKAYFPHMDFAKGFPISLNILGKV HHHCCHHHHCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MKGYKHIDYSSYDHIDHKQPIYPLPFIKDSSVDEIYCSHALEYFDYNEGIKVLNEWKRCL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SEGGILRLSVPDFDQLIKVYEQNNNDINSIIGPVFGRWEVEENKFIFHRTVYTRQKLLQA HCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHHHH LEKVGFKEICDWDPLEFHGCESNSFDDYSKAYFPHMDFAKGFPISLNILGKV HHHCCHHHHCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA