| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966532
Identifier: 123966532
GI number: 123966532
Start: 1139299
End: 1139754
Strand: Direct
Name: 123966532
Synonym: P9515_12991
Alternate gene names: NA
Gene position: 1139299-1139754 (Clockwise)
Preceding gene: 123966531
Following gene: 123966533
Centisome position: 66.85
GC content: 33.11
Gene sequence:
>456_bases ATGAGTAACAAAAATGTCATGTCATTGACAGCAGATGATAATTCAGTAATTAAAACTATTTATTCAATTATAGAGCCAGA CATAATGCTTCATCAAGTCGTTAAACCTAAAAATACATCCCCAGGGAGGATAAATGTTTCTCCAGATCATGAATCACTTC AGGTTGCTCATATTGGATTAAAATTCAACCAAACGTTTAAACCTCATAGGCATGTTTTTCATGATAGAAATATGCCTATG GCTCAGGAATCTTGGGTAGTAATTTCGGGGAAAGTAAAAGTATTTCATTATGACTTGGACGACAATATAATTAATGAATC TATTCTTCTTCCAGGTGATTGCACGATCACTTATAGGGGCGGACATAACTATTTAGCTTTGGAAGATAAAACTGTTGTGT ATGAGATTAAAACTGGGCCTTATCACGGAGTTAAAAATGATAAAACATTTATATAA
Upstream 100 bases:
>100_bases TGATTGAAAAGGAAGTTAGCAAAATACTATATTTATTTATTTTATTATTTTATATGTAAATCTCATTCTTTAGATAAGGC TTATAAAGTAGATTAACTAT
Downstream 100 bases:
>100_bases AATTCACCTCATTAACCTGTAAAATAAGATTTTCTTGTTGAATTATGACCAAGGCATTTATCACAGGTATAAATGGTCAG GACGGATCATATCTAGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSNKNVMSLTADDNSVIKTIYSIIEPDIMLHQVVKPKNTSPGRINVSPDHESLQVAHIGLKFNQTFKPHRHVFHDRNMPM AQESWVVISGKVKVFHYDLDDNIINESILLPGDCTITYRGGHNYLALEDKTVVYEIKTGPYHGVKNDKTFI
Sequences:
>Translated_151_residues MSNKNVMSLTADDNSVIKTIYSIIEPDIMLHQVVKPKNTSPGRINVSPDHESLQVAHIGLKFNQTFKPHRHVFHDRNMPM AQESWVVISGKVKVFHYDLDDNIINESILLPGDCTITYRGGHNYLALEDKTVVYEIKTGPYHGVKNDKTFI >Mature_150_residues SNKNVMSLTADDNSVIKTIYSIIEPDIMLHQVVKPKNTSPGRINVSPDHESLQVAHIGLKFNQTFKPHRHVFHDRNMPMA QESWVVISGKVKVFHYDLDDNIINESILLPGDCTITYRGGHNYLALEDKTVVYEIKTGPYHGVKNDKTFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17173; Mature: 17042
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKNVMSLTADDNSVIKTIYSIIEPDIMLHQVVKPKNTSPGRINVSPDHESLQVAHIGL CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEHCCCCCCCCCEEEECCCCCCEEEEEEEE KFNQTFKPHRHVFHDRNMPMAQESWVVISGKVKVFHYDLDDNIINESILLPGDCTITYRG EECCCCCCCHHHHCCCCCCCCCCCEEEEECEEEEEEEECCCCCCCCEEECCCCCEEEEEC GHNYLALEDKTVVYEIKTGPYHGVKNDKTFI CCCEEEEECCEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SNKNVMSLTADDNSVIKTIYSIIEPDIMLHQVVKPKNTSPGRINVSPDHESLQVAHIGL CCCEEEEEECCCCHHHHHHHHHHCCCCEEEEHCCCCCCCCCEEEECCCCCCEEEEEEEE KFNQTFKPHRHVFHDRNMPMAQESWVVISGKVKVFHYDLDDNIINESILLPGDCTITYRG EECCCCCCCHHHHCCCCCCCCCCCEEEEECEEEEEEEECCCCCCCCEEECCCCCEEEEEC GHNYLALEDKTVVYEIKTGPYHGVKNDKTFI CCCEEEEECCEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA