| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966474
Identifier: 123966474
GI number: 123966474
Start: 1094289
End: 1094543
Strand: Direct
Name: 123966474
Synonym: P9515_12411
Alternate gene names: NA
Gene position: 1094289-1094543 (Clockwise)
Preceding gene: 123966473
Following gene: 123966478
Centisome position: 64.21
GC content: 29.8
Gene sequence:
>255_bases ATGATTAAATTTAAAGATGGTTTTTCAAGCGAAAGTTATTATCCAGATAGTAATTATAATCTTGAAAAGAACAATACTTC TATAGAGACTCCAGTTTCAGAAAATCAAATATCCAATATGGGTGAATTTTTTGAATGGCCAAATACCTATTGGTTTATTG CAGAAAGAACAAATGGTAGGTTAGCAATGATTGGCTTTATGGCTGTAATTATTAACTACACCTTATTTGGATGGATAGCA TATCCAATCCTTTAA
Upstream 100 bases:
>100_bases TTATCAATGGCATAATATAAGAGAGCTTTTAGAAAGAGAACAAGAATACGATTAACAGTAACTATTTTTCCTTTTTAAGA TATAGAAAATTTCTAATAAA
Downstream 100 bases:
>100_bases ATAAATATGGAATTTTTTAAGGAGCTTTGGCATAATCAACCAATTACAGTTCTTGGTGTAGGTGCAACAATAGTACTATT GGTGATGATTTATATCAGAT
Product: high light inducible protein
Products: NA
Alternate protein names: High Light Inducible Protein-Like
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MIKFKDGFSSESYYPDSNYNLEKNNTSIETPVSENQISNMGEFFEWPNTYWFIAERTNGRLAMIGFMAVIINYTLFGWIA YPIL
Sequences:
>Translated_84_residues MIKFKDGFSSESYYPDSNYNLEKNNTSIETPVSENQISNMGEFFEWPNTYWFIAERTNGRLAMIGFMAVIINYTLFGWIA YPIL >Mature_84_residues MIKFKDGFSSESYYPDSNYNLEKNNTSIETPVSENQISNMGEFFEWPNTYWFIAERTNGRLAMIGFMAVIINYTLFGWIA YPIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9839; Mature: 9839
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFKDGFSSESYYPDSNYNLEKNNTSIETPVSENQISNMGEFFEWPNTYWFIAERTNGR CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHCHHHHCCCCEEEEEEECCCCC LAMIGFMAVIINYTLFGWIAYPIL CHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKFKDGFSSESYYPDSNYNLEKNNTSIETPVSENQISNMGEFFEWPNTYWFIAERTNGR CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHCHHHHCCCCEEEEEEECCCCC LAMIGFMAVIINYTLFGWIAYPIL CHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA