| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966473
Identifier: 123966473
GI number: 123966473
Start: 1093645
End: 1094163
Strand: Direct
Name: 123966473
Synonym: P9515_12401
Alternate gene names: NA
Gene position: 1093645-1094163 (Clockwise)
Preceding gene: 123966472
Following gene: 123966474
Centisome position: 64.17
GC content: 36.61
Gene sequence:
>519_bases ATGCCTTCTTTATTAACACTTTTTTTTTATATTCTTGCTGGAGCAGGTTTAGGAACTTTAATGATCTTCACAGGCATTCC CGCTGCTTCTTTATTGGGAGCTATCATTGGAGCTGGAGTTTTAAGTGCAAGTGGTCTAATTGATGTTGCAGTTTGGCCAT TAGGTACTAAAACAGCACTGGGGATAGGAATAGGAACTGTAATAGGCACTGGTATTAACCAAGAAACTTTAAGCGAATTA CAAAACTTGTGGAAGCCAGCATTGATAATTACATTTTCCTTATTAATAACTGGACTTTTAATAGCATTTCTAATAAGTAA ATTTCTAGGAATTGATACTGCCATTGCAATATTAGGTTCGGCTCCAGGAGGGACAATTGGGATGAGCTTAGTTGGATCTG AGTATGGAGTAGGCGCTTCAGTTGCTGCTTTACACGCGGTCAGATTAATAACCGTTTTATTACTAATTCCTGCTCTTTTA AATTTACTTGGTTTAAAAGATGGTATTAATACTCCTTAA
Upstream 100 bases:
>100_bases ATTTTAATGACACATTAAAAAAGGAAATTTTAAATTATTAACTTGTTTATCTCAAATTAAAACGTATTAATTAATTAAGA AAACAATTTCTTTTTTCAAA
Downstream 100 bases:
>100_bases TTAAATTGACTATATTATTTTCTAATTATCAATGGCATAATATAAGAGAGCTTTTAGAAAGAGAACAAGAATACGATTAA CAGTAACTATTTTTCCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPSLLTLFFYILAGAGLGTLMIFTGIPAASLLGAIIGAGVLSASGLIDVAVWPLGTKTALGIGIGTVIGTGINQETLSEL QNLWKPALIITFSLLITGLLIAFLISKFLGIDTAIAILGSAPGGTIGMSLVGSEYGVGASVAALHAVRLITVLLLIPALL NLLGLKDGINTP
Sequences:
>Translated_172_residues MPSLLTLFFYILAGAGLGTLMIFTGIPAASLLGAIIGAGVLSASGLIDVAVWPLGTKTALGIGIGTVIGTGINQETLSEL QNLWKPALIITFSLLITGLLIAFLISKFLGIDTAIAILGSAPGGTIGMSLVGSEYGVGASVAALHAVRLITVLLLIPALL NLLGLKDGINTP >Mature_171_residues PSLLTLFFYILAGAGLGTLMIFTGIPAASLLGAIIGAGVLSASGLIDVAVWPLGTKTALGIGIGTVIGTGINQETLSELQ NLWKPALIITFSLLITGLLIAFLISKFLGIDTAIAILGSAPGGTIGMSLVGSEYGVGASVAALHAVRLITVLLLIPALLN LLGLKDGINTP
Specific function: Unknown
COG id: COG3180
COG function: function code R; Putative ammonia monooxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17304; Mature: 17173
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLLTLFFYILAGAGLGTLMIFTGIPAASLLGAIIGAGVLSASGLIDVAVWPLGTKTAL CCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHEECCCCCHHHH GIGIGTVIGTGINQETLSELQNLWKPALIITFSLLITGLLIAFLISKFLGIDTAIAILGS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APGGTIGMSLVGSEYGVGASVAALHAVRLITVLLLIPALLNLLGLKDGINTP CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PSLLTLFFYILAGAGLGTLMIFTGIPAASLLGAIIGAGVLSASGLIDVAVWPLGTKTAL CHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHEECCCCCHHHH GIGIGTVIGTGINQETLSELQNLWKPALIITFSLLITGLLIAFLISKFLGIDTAIAILGS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APGGTIGMSLVGSEYGVGASVAALHAVRLITVLLLIPALLNLLGLKDGINTP CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA