Click here to switch to the map view.

The map label for this gene is petH [H]

Identifier: 123966398

GI number: 123966398

Start: 1019538

End: 1020692

Strand: Reverse

Name: petH [H]

Synonym: P9515_11651

Alternate gene names: 123966398

Gene position: 1020692-1019538 (Counterclockwise)

Preceding gene: 123966400

Following gene: 123966397

Centisome position: 59.89

GC content: 34.89

Gene sequence:

>1155_bases
ATGGTTTACTCCCAAGCAAAAGTTATCGCAGGTGGATTGGCTCATATCCCAATCGTGATAGGTGTTTTTTATTTTATAAT
GACTTTTTTTAATAAAAGAGCCATAGATTATGCTGAAGCGAATAAACCTAAAAAAGTTGAAAAGAAGGTAGTTGAAACTA
AGGTTAAGGCTAAAGAAACCTCTTCAGTAAATGCAGAAACAAAAACAGAAGCCCCATTAAAAGTTGAAAATTCTAAGATA
GATAAAAAAACTATGAAGAAAAAGCATGCAGATGTACCGGTAAATATATACAGACCAAAAACTCCATTTGAAGGAACTGT
TATCGGTAATTATAGTCTTCTCAAAGAAGGTGCTATTGGGAGAGTAAATCACATAACATTTGATCTAAAGGGAAGTGATC
CTTTTTTAAATTATGTTGAAGGTCAGAGTATAGGAATTATGCCTGTTGGTGAAGATGCTAATGGTAAACCTCACAAACTT
AGACTTTACTCAATAGCAAGTACAAGACATGGTGATGATTTCGAGGGCAATACAGTTTCTCTTTGCGTTAGACAACTCCA
ATACGAGAAAGATGGTGAAACTATTAATGGCGTTTGTTCCACTTACTTATGTGATATCAAGCCAGGAGATAAGGTGAAAA
TTACAGGTCCTGTGGGGAAAGAAATGCTTCTCCCTGAAGAAGAGGATGCAAACATAGTAATGCTGGCTACTGGTACAGGT
ATAGCTCCTATGAGAGCTTATCTAAGAAGAATGTTTGAAGCTACAGAAAAGGAAAAAAATAAATGGAATTTCAAAGGTAA
AGCATGGTTATTTATGGGTGCTCCTAAATCAGCTAACTTGCTATACGAAGAAGATTTGCAAAGATATCTTGAAAACTATC
CAGATAACTTTAAATATACTAAAGCGATTAGTCGTGAACAACAAAATACAAAAGGTGGAAGAATGTATATTCAAGATAGA
GTTTTAGAATCAGCTAATGAAATCTTTAATATGATTGAGGATGAAAAAACTCATATCTACCTTTGTGGTTTAAAAGGAAT
GGAACCTGGGATAGATGAAGCTATGACAAAAGCAGCAGCAGAAAAGGGTTTGAATTGGTCAGAGTTGAGACCACAACTTA
AAAAAGCTGGCAGATGGCACGTAGAAACCTATTAA

Upstream 100 bases:

>100_bases
ATTATATGTATATATTCCGATCTCAAAACGTAACCATTTTTATAAAACAAGTACAAATTAGGATACAAATTGATAATCTT
TTATTAAAGAAATTTACAAA

Downstream 100 bases:

>100_bases
TTTTTCTTAAAAGGTTTTAAATTATAATTTCAAGACTTTTTTGGTTTAGACACAAAATGTAGCTAATTAGCTAAAAAAAG
ACGATTTTATTTATATAAGA

Product: ferredoxin-NADP oxidoreductase (FNR)

Products: NA

Alternate protein names: FNR [H]

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MVYSQAKVIAGGLAHIPIVIGVFYFIMTFFNKRAIDYAEANKPKKVEKKVVETKVKAKETSSVNAETKTEAPLKVENSKI
DKKTMKKKHADVPVNIYRPKTPFEGTVIGNYSLLKEGAIGRVNHITFDLKGSDPFLNYVEGQSIGIMPVGEDANGKPHKL
RLYSIASTRHGDDFEGNTVSLCVRQLQYEKDGETINGVCSTYLCDIKPGDKVKITGPVGKEMLLPEEEDANIVMLATGTG
IAPMRAYLRRMFEATEKEKNKWNFKGKAWLFMGAPKSANLLYEEDLQRYLENYPDNFKYTKAISREQQNTKGGRMYIQDR
VLESANEIFNMIEDEKTHIYLCGLKGMEPGIDEAMTKAAAEKGLNWSELRPQLKKAGRWHVETY

Sequences:

>Translated_384_residues
MVYSQAKVIAGGLAHIPIVIGVFYFIMTFFNKRAIDYAEANKPKKVEKKVVETKVKAKETSSVNAETKTEAPLKVENSKI
DKKTMKKKHADVPVNIYRPKTPFEGTVIGNYSLLKEGAIGRVNHITFDLKGSDPFLNYVEGQSIGIMPVGEDANGKPHKL
RLYSIASTRHGDDFEGNTVSLCVRQLQYEKDGETINGVCSTYLCDIKPGDKVKITGPVGKEMLLPEEEDANIVMLATGTG
IAPMRAYLRRMFEATEKEKNKWNFKGKAWLFMGAPKSANLLYEEDLQRYLENYPDNFKYTKAISREQQNTKGGRMYIQDR
VLESANEIFNMIEDEKTHIYLCGLKGMEPGIDEAMTKAAAEKGLNWSELRPQLKKAGRWHVETY
>Mature_384_residues
MVYSQAKVIAGGLAHIPIVIGVFYFIMTFFNKRAIDYAEANKPKKVEKKVVETKVKAKETSSVNAETKTEAPLKVENSKI
DKKTMKKKHADVPVNIYRPKTPFEGTVIGNYSLLKEGAIGRVNHITFDLKGSDPFLNYVEGQSIGIMPVGEDANGKPHKL
RLYSIASTRHGDDFEGNTVSLCVRQLQYEKDGETINGVCSTYLCDIKPGDKVKITGPVGKEMLLPEEEDANIVMLATGTG
IAPMRAYLRRMFEATEKEKNKWNFKGKAWLFMGAPKSANLLYEEDLQRYLENYPDNFKYTKAISREQQNTKGGRMYIQDR
VLESANEIFNMIEDEKTHIYLCGLKGMEPGIDEAMTKAAAEKGLNWSELRPQLKKAGRWHVETY

Specific function: Essential for growth [H]

COG id: COG0369

COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=May be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Homo sapiens, GI24041029, Length=235, Percent_Identity=26.8085106382979, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI1789123, Length=211, Percent_Identity=29.3838862559242, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17554134, Length=209, Percent_Identity=28.2296650717703, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321832, Length=168, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6321143, Length=240, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24582192, Length=265, Percent_Identity=27.5471698113208, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17137192, Length=265, Percent_Identity=27.5471698113208, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24583543, Length=212, Percent_Identity=27.8301886792453, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI78706876, Length=212, Percent_Identity=27.8301886792453, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI78706872, Length=212, Percent_Identity=27.8301886792453, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017927
- InterPro:   IPR001709
- InterPro:   IPR012146
- InterPro:   IPR015701
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR008213
- InterPro:   IPR017938 [H]

Pfam domain/function: PF01383 CpcD; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 43312; Mature: 43312

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYSQAKVIAGGLAHIPIVIGVFYFIMTFFNKRAIDYAEANKPKKVEKKVVETKVKAKET
CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHC
SSVNAETKTEAPLKVENSKIDKKTMKKKHADVPVNIYRPKTPFEGTVIGNYSLLKEGAIG
CCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCEEEECCCCCCCCEEECCHHHHHCCCCC
RVNHITFDLKGSDPFLNYVEGQSIGIMPVGEDANGKPHKLRLYSIASTRHGDDFEGNTVS
EEEEEEEEECCCCCCHHEECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHH
LCVRQLQYEKDGETINGVCSTYLCDIKPGDKVKITGPVGKEMLLPEEEDANIVMLATGTG
HHHHHHHHCCCCCHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCC
IAPMRAYLRRMFEATEKEKNKWNFKGKAWLFMGAPKSANLLYEEDLQRYLENYPDNFKYT
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHH
KAISREQQNTKGGRMYIQDRVLESANEIFNMIEDEKTHIYLCGLKGMEPGIDEAMTKAAA
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH
EKGLNWSELRPQLKKAGRWHVETY
HHCCCHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MVYSQAKVIAGGLAHIPIVIGVFYFIMTFFNKRAIDYAEANKPKKVEKKVVETKVKAKET
CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHC
SSVNAETKTEAPLKVENSKIDKKTMKKKHADVPVNIYRPKTPFEGTVIGNYSLLKEGAIG
CCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCEEEECCCCCCCCEEECCHHHHHCCCCC
RVNHITFDLKGSDPFLNYVEGQSIGIMPVGEDANGKPHKLRLYSIASTRHGDDFEGNTVS
EEEEEEEEECCCCCCHHEECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHH
LCVRQLQYEKDGETINGVCSTYLCDIKPGDKVKITGPVGKEMLLPEEEDANIVMLATGTG
HHHHHHHHCCCCCHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCC
IAPMRAYLRRMFEATEKEKNKWNFKGKAWLFMGAPKSANLLYEEDLQRYLENYPDNFKYT
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHH
KAISREQQNTKGGRMYIQDRVLESANEIFNMIEDEKTHIYLCGLKGMEPGIDEAMTKAAA
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH
EKGLNWSELRPQLKKAGRWHVETY
HHCCCHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]