| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is folD
Identifier: 123966392
GI number: 123966392
Start: 1012865
End: 1013761
Strand: Direct
Name: folD
Synonym: P9515_11591
Alternate gene names: 123966392
Gene position: 1012865-1013761 (Clockwise)
Preceding gene: 123966390
Following gene: 123966393
Centisome position: 59.43
GC content: 30.88
Gene sequence:
>897_bases ATGTCATTAAAATTGGATGGTAAAAAATTATCTTTAGAAATTGAAGAAAAATTAAAAAAAGATATTGAATCTAATATAAA TTCAACAAAAAGGCCTCCAGGTTTAGCTGTAATAAGAATTGGAGAAGATCCTGCTAGTGGCGTCTATGTTAAGAATAAAG AAAGAGCATGTGCAAGAGTTGGGATAAAGAGTTTTATTTTTCATTTGAAAGATACTATCGATCAAAAAGAAGTTGAACAA TTAATAAATAAATTAAATCTTGATAATGATATTGACGGAATGCTACTGCAACTTCCCATACCAGATAAATTTGATGAGCA AAGATTGATAAGTTTAATCAATCCAGACAAAGATGTAGATGGATTAAATGAGAAAAATATTGGCAAATTAGTTAAAAATG AACCGGGGATGAGATCTTGTACACCAGCAGGGATAGTTAATTTATTAAGATCCCAAAATATTACAATTGAAGGAAAAAAA ATTGTTGTTGTTGGAAGAAGCCTCTTGGTTGGGAAACCCCTATCTCTAATGTTGTTAAATCTAAATGGTACGGTAACAAT AACTCATTCAAAGACTATAAATTTAAAGAAGATATGTAAGGAAGCGGATATATTAATTGCTGCCGCAGGAAAACCTAATC TTATAAACTCTAGTTATGTAAAAGATGGTGCTGTAATTATTGATGTGGGAATACATAGATTAACAAGTTCTGATAAAAGC CAAACTAAATTATGTGGAGATGTATTATTAGAAGATGTAATTCCCAAAGTTTATGCATACACACCGGTTCCTGGAGGTGT TGGACCAATGACGGTAACAATGTTACTAGTAAATACTATTTTTAGTTGGCAAAAGCAATTTGTTTTATTATCAAGGCTTA GTGACCTTTTGCCATAA
Upstream 100 bases:
>100_bases TTTAAAGTAGTTTTAAGGTTATGCACAGAATATGAAGAAATCTATTTGAATAATTTAAAATTATAGGCATGCTAGGTGTA AAAAGGAGAAGTTTTTCTAA
Downstream 100 bases:
>100_bases AGTCCACGATGCAGAAAAAATTTACTCAATGTAAAAAATGACAGAAGTTATCGATAATATTTCAGATTTTGATAAATATC TAAAAGAGACAAAAAAAATC
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSLKLDGKKLSLEIEEKLKKDIESNINSTKRPPGLAVIRIGEDPASGVYVKNKERACARVGIKSFIFHLKDTIDQKEVEQ LINKLNLDNDIDGMLLQLPIPDKFDEQRLISLINPDKDVDGLNEKNIGKLVKNEPGMRSCTPAGIVNLLRSQNITIEGKK IVVVGRSLLVGKPLSLMLLNLNGTVTITHSKTINLKKICKEADILIAAAGKPNLINSSYVKDGAVIIDVGIHRLTSSDKS QTKLCGDVLLEDVIPKVYAYTPVPGGVGPMTVTMLLVNTIFSWQKQFVLLSRLSDLLP
Sequences:
>Translated_298_residues MSLKLDGKKLSLEIEEKLKKDIESNINSTKRPPGLAVIRIGEDPASGVYVKNKERACARVGIKSFIFHLKDTIDQKEVEQ LINKLNLDNDIDGMLLQLPIPDKFDEQRLISLINPDKDVDGLNEKNIGKLVKNEPGMRSCTPAGIVNLLRSQNITIEGKK IVVVGRSLLVGKPLSLMLLNLNGTVTITHSKTINLKKICKEADILIAAAGKPNLINSSYVKDGAVIIDVGIHRLTSSDKS QTKLCGDVLLEDVIPKVYAYTPVPGGVGPMTVTMLLVNTIFSWQKQFVLLSRLSDLLP >Mature_297_residues SLKLDGKKLSLEIEEKLKKDIESNINSTKRPPGLAVIRIGEDPASGVYVKNKERACARVGIKSFIFHLKDTIDQKEVEQL INKLNLDNDIDGMLLQLPIPDKFDEQRLISLINPDKDVDGLNEKNIGKLVKNEPGMRSCTPAGIVNLLRSQNITIEGKKI VVVGRSLLVGKPLSLMLLNLNGTVTITHSKTINLKKICKEADILIAAAGKPNLINSSYVKDGAVIIDVGIHRLTSSDKSQ TKLCGDVLLEDVIPKVYAYTPVPGGVGPMTVTMLLVNTIFSWQKQFVLLSRLSDLLP
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI94721354, Length=299, Percent_Identity=43.4782608695652, Blast_Score=219, Evalue=2e-57, Organism=Homo sapiens, GI222418558, Length=292, Percent_Identity=40.4109589041096, Blast_Score=201, Evalue=5e-52, Organism=Homo sapiens, GI222136639, Length=287, Percent_Identity=36.5853658536585, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI36796743, Length=201, Percent_Identity=27.8606965174129, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1786741, Length=276, Percent_Identity=43.8405797101449, Blast_Score=243, Evalue=9e-66, Organism=Caenorhabditis elegans, GI17568735, Length=282, Percent_Identity=39.7163120567376, Blast_Score=180, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6321643, Length=294, Percent_Identity=40.1360544217687, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6319558, Length=298, Percent_Identity=39.5973154362416, Blast_Score=210, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6322933, Length=320, Percent_Identity=25, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI17136816, Length=297, Percent_Identity=40.7407407407407, Blast_Score=210, Evalue=9e-55, Organism=Drosophila melanogaster, GI17136818, Length=297, Percent_Identity=40.7407407407407, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI62472483, Length=304, Percent_Identity=35.1973684210526, Blast_Score=184, Evalue=5e-47, Organism=Drosophila melanogaster, GI45551871, Length=304, Percent_Identity=35.1973684210526, Blast_Score=184, Evalue=5e-47, Organism=Drosophila melanogaster, GI24645718, Length=295, Percent_Identity=36.6101694915254, Blast_Score=184, Evalue=7e-47, Organism=Drosophila melanogaster, GI17137370, Length=295, Percent_Identity=36.6101694915254, Blast_Score=184, Evalue=7e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_PROM5 (A2BX55)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001011473.1 - ProteinModelPortal: A2BX55 - SMR: A2BX55 - STRING: A2BX55 - GeneID: 4718979 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_11591 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: DVVYETA - ProtClustDB: PRK14186 - BioCyc: PMAR167542:P9515ORF_1211-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 32709; Mature: 32578
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKLDGKKLSLEIEEKLKKDIESNINSTKRPPGLAVIRIGEDPASGVYVKNKERACARV CCEECCCCEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHH GIKSFIFHLKDTIDQKEVEQLINKLNLDNDIDGMLLQLPIPDKFDEQRLISLINPDKDVD HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCC GLNEKNIGKLVKNEPGMRSCTPAGIVNLLRSQNITIEGKKIVVVGRSLLVGKPLSLMLLN CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEECCCEEEEEECHHHHCCCCEEEEEE LNGTVTITHSKTINLKKICKEADILIAAAGKPNLINSSYVKDGAVIIDVGIHRLTSSDKS CCCEEEEEECCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECHHHHCCCCCH QTKLCGDVLLEDVIPKVYAYTPVPGGVGPMTVTMLLVNTIFSWQKQFVLLSRLSDLLP HHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLKLDGKKLSLEIEEKLKKDIESNINSTKRPPGLAVIRIGEDPASGVYVKNKERACARV CEECCCCEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHH GIKSFIFHLKDTIDQKEVEQLINKLNLDNDIDGMLLQLPIPDKFDEQRLISLINPDKDVD HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCC GLNEKNIGKLVKNEPGMRSCTPAGIVNLLRSQNITIEGKKIVVVGRSLLVGKPLSLMLLN CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEECCCEEEEEECHHHHCCCCEEEEEE LNGTVTITHSKTINLKKICKEADILIAAAGKPNLINSSYVKDGAVIIDVGIHRLTSSDKS CCCEEEEEECCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECHHHHCCCCCH QTKLCGDVLLEDVIPKVYAYTPVPGGVGPMTVTMLLVNTIFSWQKQFVLLSRLSDLLP HHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA