| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is fur [C]
Identifier: 123966357
GI number: 123966357
Start: 979500
End: 979907
Strand: Direct
Name: fur [C]
Synonym: P9515_11241
Alternate gene names: 123966357
Gene position: 979500-979907 (Clockwise)
Preceding gene: 123966355
Following gene: 123966359
Centisome position: 57.48
GC content: 34.8
Gene sequence:
>408_bases ATGGTAACCAAGCCTGACATTACCAAAAGACAAGAGCAACTTCTTGAAGAACTTAATAAATGTGATGATGAATTGAGCGG TCAGGAATTGCATAGACAACTGATTATTGATGGCAAATCTATGGGTTTGACAACAGTTTATAGAAATCTTCAAGTTCTTA TAAAACATGGCTTAATTAGATCTAGACATCTCCCAACCGGAGAAGTCCTTTACACACCTGTTGATAGAGATATTCACCAT GTGACATGTGTTCAATGCGGAACAACATCGAAGATGGAGGGTTGTCCTGTAAAAGATATAAATACTCCCAATAAAAAACC AAAAAAATTTCAATTATTGTTTCATACACTTGAATATTTCGGTATTTGCCAAAACTGCGATCAATCTCAAAGTAAAAACC AGATATAG
Upstream 100 bases:
>100_bases GTAATTATTAAAGGAATTAACCACCAGTTGTTTATAAAAGACATTAATCGTATGATTCGTTATGATCAAAAAAAGATGAT TTAAAAAGATCTTGAAAAAT
Downstream 100 bases:
>100_bases TCTTAATCACAACAAGCATTTTCCTCTAAGCTACTAATATTCATATCTTCCAATTTATCTTTTATTGAACTTGGACTCCC ACAAGCTAGTACTGTTTTAT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric Uptake Regulation Protein; Ferric Uptake Regulator Fur Family; FUR Family Transcriptional Regulator; Ferric-Uptake Regulator; Zinc Uptake Regulator; Fur Family Ferric Uptake Regulator; Zinc Uptake Regulator Fur Family; Ferric Uptake Regulator Family; Ferric Uptake Regulator; Transcriptional Regulator Fur Family Protein; Transcriptional Regulator Fur Family; Ferric Uptake Regulatory Protein; Ferric Uptake Regulator Furb; Transcriptional Regulator FUR Family; Zinc Uptake Regulation Protein Zur; Metal Uptake Regulation Protein; Ferric Uptake Regulation Protein FurB; Ferric Uptake Regulator FurB; Fur Family Transcriptional Regulator; Metal Uptake Regulator Ferric Uptake Regulator Protein; Fe(3+) Uptake Regulation Protein; Fe2Zn2/ Uptake Regulation Protein
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MVTKPDITKRQEQLLEELNKCDDELSGQELHRQLIIDGKSMGLTTVYRNLQVLIKHGLIRSRHLPTGEVLYTPVDRDIHH VTCVQCGTTSKMEGCPVKDINTPNKKPKKFQLLFHTLEYFGICQNCDQSQSKNQI
Sequences:
>Translated_135_residues MVTKPDITKRQEQLLEELNKCDDELSGQELHRQLIIDGKSMGLTTVYRNLQVLIKHGLIRSRHLPTGEVLYTPVDRDIHH VTCVQCGTTSKMEGCPVKDINTPNKKPKKFQLLFHTLEYFGICQNCDQSQSKNQI >Mature_135_residues MVTKPDITKRQEQLLEELNKCDDELSGQELHRQLIIDGKSMGLTTVYRNLQVLIKHGLIRSRHLPTGEVLYTPVDRDIHH VTCVQCGTTSKMEGCPVKDINTPNKKPKKFQLLFHTLEYFGICQNCDQSQSKNQI
Specific function: Acts As A Global Negative Controlling Element, Employing Fe(2+) As A Cofactor To Bind The Operator Of The Repressed Genes. Regulates The Expression Of Several Outer-Membrane Proteins Including The Iron Transport Operon. [C]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15490; Mature: 15490
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTKPDITKRQEQLLEELNKCDDELSGQELHRQLIIDGKSMGLTTVYRNLQVLIKHGLIR CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SRHLPTGEVLYTPVDRDIHHVTCVQCGTTSKMEGCPVKDINTPNKKPKKFQLLFHTLEYF CCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GICQNCDQSQSKNQI HHHCCCCCCCCCCCC >Mature Secondary Structure MVTKPDITKRQEQLLEELNKCDDELSGQELHRQLIIDGKSMGLTTVYRNLQVLIKHGLIR CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SRHLPTGEVLYTPVDRDIHHVTCVQCGTTSKMEGCPVKDINTPNKKPKKFQLLFHTLEYF CCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GICQNCDQSQSKNQI HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA