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The map label for this gene is lraI [H]

Identifier: 123966359

GI number: 123966359

Start: 980823

End: 982343

Strand: Direct

Name: lraI [H]

Synonym: P9515_11261

Alternate gene names: 123966359

Gene position: 980823-982343 (Clockwise)

Preceding gene: 123966357

Following gene: 123966360

Centisome position: 57.55

GC content: 33.93

Gene sequence:

>1521_bases
ATGTCTATTTTCAAAAAACTTCTTATTAAAAAAAACGAGAAATCTAATAAATCGCTTTTAAAAACTACTTTAGTTGCTGG
GAGTATATTATTTTCAACTGTTGGACAAGATGTTTTAGCGGAAGGTAAATCATATGTAGCTGTAGAGCCATTCGTCTGTG
ATTTAGTTAAATCAATAGCATTAACTTCTGACAAGGTAACTTGTTTGGTTGATAGAAAAGAAGATGTGCATGACTTGAAA
ATCACTCCAAGACAGGCTCAATTACTTAACAATGCGGATAAAGTTTTTACTTTAGGGAAAGAAATGAATCCAACCATGAA
AAATTGGGAAAGTAAAAAGCAAACTGTTGTTGTAGGTGTTAGCGCAATAGATGTAGATGATCACTCAGATCATGGAGGAC
ATGATGATCACGATGAACATTCAGCTAAGGTAGATGATCACTCTGATCATGGAGGTCATGATGACCATTCAGACTATGGT
GGACATGATGAACATGCTGAGGGTGCTTTCGAATGGGCAGGAAAATTCCAGCTATCTAAGGGTTCTTACAAATGGTCATT
TGAAAAAGTCGATGGCGAATATGCAGATCCTGCAATGAAGATGGTGATTCTCAAATCTAATGACATAGAAGGGTCTGAAG
ATTTAGCTAAAGAACTATTAGGATCTAAAGACTCAATAATCAAGAAAAATAATGATACTTTGATCGCAAGTAATAAAGCT
TTTGTTCTTAACTTTGATCAAAGAAAAGAAAGCACTGTATTTAACGTGGATATTAAAGAAGATGGTCAATATATATTTTT
TACTGAACACATGCCTTTTGAGTTTGAAGCAACTCAACACTTTTTTAAAGACGTTTTAAATAGTGATGTCGAGCCAATAG
CACAAGTACCAGATGAAGGGGATGGGCATCATCACCATCATGACCATGGAGGTCTAGATCCACATGTATGGCATGATCCA
CATAACATCATAAAAATGGGTGAAGTAGTAAGTAAAAATTTAAAGAAAGATATCTCTGTTTTTAATAGATCTGACAGGAG
ATTAATCAATGAGAGTTTTACTTCTGTGGAGTCAACACTAGAAGAACTTGATAGCTGGATTGTTAAACAGGTTTCAACAA
TTCCAAAGGCAAATCGAATTATTGTTTCTAAACATAATGCTATGCAATATTACGGAGATGCATTTGGATTTAAAATTATT
AGCTTACTTGATTCTTTAGGGGAATCATCAAGCTTAAGACCAGAAAAAATTAAATCTACTTTAGAAGAACTCAAGAAAGA
TAATGTGAAAGTATTGTTCTCTGAGCAGAAGCCTGTCTCAAAGTTAATAAAAAACCTAAGCAGACAAAGTTCAATACCTC
TTTCTTCTGATCAAATATATAGTGATGGACTAATGATGACAGGAAATACAGTTTCAGTGGCAGTTCACAATACATGTACA
ATTGTTAACTCATTAGGTGGATCATGTGATGAAGAATTTGGGTCTATCATAGAAAATAAATGGGATTCTCTCTCAAATTA
A

Upstream 100 bases:

>100_bases
AATATAAAAATTTTTATACTTTTTTCATAACAAATCCTATTAAATGATTGCCAATTAAAATGAAAACGATTATCATTATT
ATGATAACATATTTTCATTT

Downstream 100 bases:

>100_bases
TTTTTTATAAATAACGGTTTTCATTATCATTATTGATTAACATATATTTGTTAGTCATCAATCAAGAAAACTATTAAAAA
GATGAGTATTAACGAAAGAG

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MSIFKKLLIKKNEKSNKSLLKTTLVAGSILFSTVGQDVLAEGKSYVAVEPFVCDLVKSIALTSDKVTCLVDRKEDVHDLK
ITPRQAQLLNNADKVFTLGKEMNPTMKNWESKKQTVVVGVSAIDVDDHSDHGGHDDHDEHSAKVDDHSDHGGHDDHSDYG
GHDEHAEGAFEWAGKFQLSKGSYKWSFEKVDGEYADPAMKMVILKSNDIEGSEDLAKELLGSKDSIIKKNNDTLIASNKA
FVLNFDQRKESTVFNVDIKEDGQYIFFTEHMPFEFEATQHFFKDVLNSDVEPIAQVPDEGDGHHHHHDHGGLDPHVWHDP
HNIIKMGEVVSKNLKKDISVFNRSDRRLINESFTSVESTLEELDSWIVKQVSTIPKANRIIVSKHNAMQYYGDAFGFKII
SLLDSLGESSSLRPEKIKSTLEELKKDNVKVLFSEQKPVSKLIKNLSRQSSIPLSSDQIYSDGLMMTGNTVSVAVHNTCT
IVNSLGGSCDEEFGSIIENKWDSLSN

Sequences:

>Translated_506_residues
MSIFKKLLIKKNEKSNKSLLKTTLVAGSILFSTVGQDVLAEGKSYVAVEPFVCDLVKSIALTSDKVTCLVDRKEDVHDLK
ITPRQAQLLNNADKVFTLGKEMNPTMKNWESKKQTVVVGVSAIDVDDHSDHGGHDDHDEHSAKVDDHSDHGGHDDHSDYG
GHDEHAEGAFEWAGKFQLSKGSYKWSFEKVDGEYADPAMKMVILKSNDIEGSEDLAKELLGSKDSIIKKNNDTLIASNKA
FVLNFDQRKESTVFNVDIKEDGQYIFFTEHMPFEFEATQHFFKDVLNSDVEPIAQVPDEGDGHHHHHDHGGLDPHVWHDP
HNIIKMGEVVSKNLKKDISVFNRSDRRLINESFTSVESTLEELDSWIVKQVSTIPKANRIIVSKHNAMQYYGDAFGFKII
SLLDSLGESSSLRPEKIKSTLEELKKDNVKVLFSEQKPVSKLIKNLSRQSSIPLSSDQIYSDGLMMTGNTVSVAVHNTCT
IVNSLGGSCDEEFGSIIENKWDSLSN
>Mature_505_residues
SIFKKLLIKKNEKSNKSLLKTTLVAGSILFSTVGQDVLAEGKSYVAVEPFVCDLVKSIALTSDKVTCLVDRKEDVHDLKI
TPRQAQLLNNADKVFTLGKEMNPTMKNWESKKQTVVVGVSAIDVDDHSDHGGHDDHDEHSAKVDDHSDHGGHDDHSDYGG
HDEHAEGAFEWAGKFQLSKGSYKWSFEKVDGEYADPAMKMVILKSNDIEGSEDLAKELLGSKDSIIKKNNDTLIASNKAF
VLNFDQRKESTVFNVDIKEDGQYIFFTEHMPFEFEATQHFFKDVLNSDVEPIAQVPDEGDGHHHHHDHGGLDPHVWHDPH
NIIKMGEVVSKNLKKDISVFNRSDRRLINESFTSVESTLEELDSWIVKQVSTIPKANRIIVSKHNAMQYYGDAFGFKIIS
LLDSLGESSSLRPEKIKSTLEELKKDNVKVLFSEQKPVSKLIKNLSRQSSIPLSSDQIYSDGLMMTGNTVSVAVHNTCTI
VNSLGGSCDEEFGSIIENKWDSLSN

Specific function: This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 56540; Mature: 56409

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFKKLLIKKNEKSNKSLLKTTLVAGSILFSTVGQDVLAEGKSYVAVEPFVCDLVKSIA
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEECHHHHHHHHHHH
LTSDKVTCLVDRKEDVHDLKITPRQAQLLNNADKVFTLGKEMNPTMKNWESKKQTVVVGV
CCCCCEEEEEECCCCCCCEECCCHHHHHHCCCHHEEEECCCCCCHHHHHCCCCCEEEEEE
SAIDVDDHSDHGGHDDHDEHSAKVDDHSDHGGHDDHSDYGGHDEHAEGAFEWAGKFQLSK
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECC
GSYKWSFEKVDGEYADPAMKMVILKSNDIEGSEDLAKELLGSKDSIIKKNNDTLIASNKA
CCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCEEECCCCEEEECCCE
FVLNFDQRKESTVFNVDIKEDGQYIFFTEHMPFEFEATQHFFKDVLNSDVEPIAQVPDEG
EEEEECCCCCCEEEEEEEECCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCHHHHCCCCC
DGHHHHHDHGGLDPHVWHDPHNIIKMGEVVSKNLKKDISVFNRSDRRLINESFTSVESTL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
EELDSWIVKQVSTIPKANRIIVSKHNAMQYYGDAFGFKIISLLDSLGESSSLRPEKIKST
HHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LEELKKDNVKVLFSEQKPVSKLIKNLSRQSSIPLSSDQIYSDGLMMTGNTVSVAVHNTCT
HHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEECCCEEEECCEEEEEECCHHH
IVNSLGGSCDEEFGSIIENKWDSLSN
HHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIFKKLLIKKNEKSNKSLLKTTLVAGSILFSTVGQDVLAEGKSYVAVEPFVCDLVKSIA
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEECHHHHHHHHHHH
LTSDKVTCLVDRKEDVHDLKITPRQAQLLNNADKVFTLGKEMNPTMKNWESKKQTVVVGV
CCCCCEEEEEECCCCCCCEECCCHHHHHHCCCHHEEEECCCCCCHHHHHCCCCCEEEEEE
SAIDVDDHSDHGGHDDHDEHSAKVDDHSDHGGHDDHSDYGGHDEHAEGAFEWAGKFQLSK
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECC
GSYKWSFEKVDGEYADPAMKMVILKSNDIEGSEDLAKELLGSKDSIIKKNNDTLIASNKA
CCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCEEECCCCEEEECCCE
FVLNFDQRKESTVFNVDIKEDGQYIFFTEHMPFEFEATQHFFKDVLNSDVEPIAQVPDEG
EEEEECCCCCCEEEEEEEECCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCHHHHCCCCC
DGHHHHHDHGGLDPHVWHDPHNIIKMGEVVSKNLKKDISVFNRSDRRLINESFTSVESTL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
EELDSWIVKQVSTIPKANRIIVSKHNAMQYYGDAFGFKIISLLDSLGESSSLRPEKIKST
HHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LEELKKDNVKVLFSEQKPVSKLIKNLSRQSSIPLSSDQIYSDGLMMTGNTVSVAVHNTCT
HHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEECCCEEEECCEEEEEECCHHH
IVNSLGGSCDEEFGSIIENKWDSLSN
HHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]