| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966300
Identifier: 123966300
GI number: 123966300
Start: 947496
End: 947828
Strand: Reverse
Name: 123966300
Synonym: P9515_10671
Alternate gene names: NA
Gene position: 947828-947496 (Counterclockwise)
Preceding gene: 123966302
Following gene: 123966292
Centisome position: 55.62
GC content: 31.23
Gene sequence:
>333_bases ATGATCACTAAATTCTTAAGCAAACTAAAATCAATTCTTTTTAAAAGTAAGGCCTCTTCCGAAAAATCTACTGCTAAAAT TACTAAAACAAAAGCTAAAAAGAAGTCACCAAAGTCTTCCAAGACTTCAAAATCCAAAACAAAAAAAGATGAACAAAAAA AATTGATCGAAGCTTTAAAAGCTATTCCTGGGGTTGGAGCTAAGAGTGCAGAGGCTTTTTATAAAGCTGGATTTAAAACT CCAAAAGCAATTACCTCAGCTAATGATGAAGATCTTCTCGCTGTTCCTGGTGTTGGAATCAACCTTGTAAAAAAATTAAA AAATCTTAATTAA
Upstream 100 bases:
>100_bases TCTATTATTCCTTCTTCAATATAATTATTAATCCCTTAAAAAAGTTTAATGGTTTCTTGAATGGATTTAGAATTTAATAA ATTACCTAACTTATGAATAA
Downstream 100 bases:
>100_bases AAACATATTATAGAATTAGATCTACTGATTATTATCAGTGGGATAATTATTCACTGATATATTCCTCTAAATAAACATAA AAGGGTATTTAATCTTGGAT
Product: helix-hairpin-helix DNA-binding motif-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MITKFLSKLKSILFKSKASSEKSTAKITKTKAKKKSPKSSKTSKSKTKKDEQKKLIEALKAIPGVGAKSAEAFYKAGFKT PKAITSANDEDLLAVPGVGINLVKKLKNLN
Sequences:
>Translated_110_residues MITKFLSKLKSILFKSKASSEKSTAKITKTKAKKKSPKSSKTSKSKTKKDEQKKLIEALKAIPGVGAKSAEAFYKAGFKT PKAITSANDEDLLAVPGVGINLVKKLKNLN >Mature_110_residues MITKFLSKLKSILFKSKASSEKSTAKITKTKAKKKSPKSSKTSKSKTKKDEQKKLIEALKAIPGVGAKSAEAFYKAGFKT PKAITSANDEDLLAVPGVGINLVKKLKNLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11853; Mature: 11853
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKFLSKLKSILFKSKASSEKSTAKITKTKAKKKSPKSSKTSKSKTKKDEQKKLIEALK CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AIPGVGAKSAEAFYKAGFKTPKAITSANDEDLLAVPGVGINLVKKLKNLN HCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCEEECCCCCHHHHHHHHCCC >Mature Secondary Structure MITKFLSKLKSILFKSKASSEKSTAKITKTKAKKKSPKSSKTSKSKTKKDEQKKLIEALK CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AIPGVGAKSAEAFYKAGFKTPKAITSANDEDLLAVPGVGINLVKKLKNLN HCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA