| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966302
Identifier: 123966302
GI number: 123966302
Start: 948929
End: 950089
Strand: Reverse
Name: 123966302
Synonym: P9515_10691
Alternate gene names: NA
Gene position: 950089-948929 (Counterclockwise)
Preceding gene: 123966303
Following gene: 123966300
Centisome position: 55.75
GC content: 24.38
Gene sequence:
>1161_bases ATGCAAAATCAACAACTATACGATATTGCCATAATTGGAGGAGGGATTTCTTCATCGGTATTTACCTCTAGTCATATTAA AAATGGTTTTAGTGGAAAATTAGCAATAATTGAAAATGGACGAAATCTTGGAGGAAGATCTAGTACTAGATATAGTCAAA TTAATAATGGCTGGGAGCTTAATCATGGTTCTCCAAATCTTAATATTTGCAATAAGAAAAATAATCAATTACTAAAAACT TTTATTCAAGAATTATTAGATGAAGAAATTATCCAGCAAGATACCTCGGAATTTATTGAATTGAATGAAGATTACATTCC TTCTAAAATAGATAGTGATTTTCATAGTGGGACAAATTATATCCCAAGAACTTCGATGTCTGAATTAGCAAAAAATATAA TTTCTTATAATAATTTAAGAAATCAAGTTGATTATTTCTTTGAAACTTTAATATTCAAATTAGATTTTAAAGATAATAGA TGGATTTTAACTTCAAAAAATGGATATGAAATAAACTCTAAATTTCTTATTTGTTCAAGCAATTTAATTTTACATAAAAG ATCTTTAGATATTATGAAGATCAGTCAAACTCCTTTAAGGAAAGCTATACCAATATATAAAGATAAAAAATTAGATAAAA TCATAAATCTCCTAAATCAACAAAATTACATTAAAAGGTTAACTTTTATGATATATACAAATTCTTATTATGATTATAAA GACGATTATAAAAAAAAATATAGATATTTTATATTAAACAATGTTTTTGAAGAAAAATATAAATTTGAAAGAATTATTTT TCAGAGACAAAAAAATAATAAATTAGGAATAGTAATTCATACAAGAAATAATGAATTTATAAATGAATATTTTCAAAATA AAAATATAAAGTTATTCAAAAAAAATTTATTATTAAAATTCAATCAAATATTTCAAAATCAGCCACATATAAACAAAATA ATAGATTATCAGGATATTTCCATAATGAAATGGAGGGCTTCACAACCTTCGGGCATAGGTATTCCTGAAAACTTACAAGT TTGTGAAAGTCATAATATAGCTTTTTGTGGCGATTGGATTGGTAATGAGGGATTTGGAAGGATGGAGGGTGCGATTTTGA GCGCTTTGAATTTGTCTCACAAAATTAATAAATTGTTTTAG
Upstream 100 bases:
>100_bases CTTGATAATAATATTTGTCCTGTGATTGAAACTGACTTTACCTCTACAAAAAAAATGATGGAAATAGATAATTTATTGAA AATCTAATTAAATATCACTT
Downstream 100 bases:
>100_bases TTATTTTTTTTAGTAAGATTTTTATGTCTTTTTTATTTTTTACAATAAATTTATTTAGGTAATTTCTTGAATAATTTTCA TTTTTATTTTTATAAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MQNQQLYDIAIIGGGISSSVFTSSHIKNGFSGKLAIIENGRNLGGRSSTRYSQINNGWELNHGSPNLNICNKKNNQLLKT FIQELLDEEIIQQDTSEFIELNEDYIPSKIDSDFHSGTNYIPRTSMSELAKNIISYNNLRNQVDYFFETLIFKLDFKDNR WILTSKNGYEINSKFLICSSNLILHKRSLDIMKISQTPLRKAIPIYKDKKLDKIINLLNQQNYIKRLTFMIYTNSYYDYK DDYKKKYRYFILNNVFEEKYKFERIIFQRQKNNKLGIVIHTRNNEFINEYFQNKNIKLFKKNLLLKFNQIFQNQPHINKI IDYQDISIMKWRASQPSGIGIPENLQVCESHNIAFCGDWIGNEGFGRMEGAILSALNLSHKINKLF
Sequences:
>Translated_386_residues MQNQQLYDIAIIGGGISSSVFTSSHIKNGFSGKLAIIENGRNLGGRSSTRYSQINNGWELNHGSPNLNICNKKNNQLLKT FIQELLDEEIIQQDTSEFIELNEDYIPSKIDSDFHSGTNYIPRTSMSELAKNIISYNNLRNQVDYFFETLIFKLDFKDNR WILTSKNGYEINSKFLICSSNLILHKRSLDIMKISQTPLRKAIPIYKDKKLDKIINLLNQQNYIKRLTFMIYTNSYYDYK DDYKKKYRYFILNNVFEEKYKFERIIFQRQKNNKLGIVIHTRNNEFINEYFQNKNIKLFKKNLLLKFNQIFQNQPHINKI IDYQDISIMKWRASQPSGIGIPENLQVCESHNIAFCGDWIGNEGFGRMEGAILSALNLSHKINKLF >Mature_386_residues MQNQQLYDIAIIGGGISSSVFTSSHIKNGFSGKLAIIENGRNLGGRSSTRYSQINNGWELNHGSPNLNICNKKNNQLLKT FIQELLDEEIIQQDTSEFIELNEDYIPSKIDSDFHSGTNYIPRTSMSELAKNIISYNNLRNQVDYFFETLIFKLDFKDNR WILTSKNGYEINSKFLICSSNLILHKRSLDIMKISQTPLRKAIPIYKDKKLDKIINLLNQQNYIKRLTFMIYTNSYYDYK DDYKKKYRYFILNNVFEEKYKFERIIFQRQKNNKLGIVIHTRNNEFINEYFQNKNIKLFKKNLLLKFNQIFQNQPHINKI IDYQDISIMKWRASQPSGIGIPENLQVCESHNIAFCGDWIGNEGFGRMEGAILSALNLSHKINKLF
Specific function: Unknown
COG id: COG3380
COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45294; Mature: 45294
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNQQLYDIAIIGGGISSSVFTSSHIKNGFSGKLAIIENGRNLGGRSSTRYSQINNGWEL CCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEE NHGSPNLNICNKKNNQLLKTFIQELLDEEIIQQDTSEFIELNEDYIPSKIDSDFHSGTNY CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCC IPRTSMSELAKNIISYNNLRNQVDYFFETLIFKLDFKDNRWILTSKNGYEINSKFLICSS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCEEECCEEEEEEC NLILHKRSLDIMKISQTPLRKAIPIYKDKKLDKIINLLNQQNYIKRLTFMIYTNSYYDYK CEEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHEEEEEEECCCCCCH DDYKKKYRYFILNNVFEEKYKFERIIFQRQKNNKLGIVIHTRNNEFINEYFQNKNIKLFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCEEEEH KNLLLKFNQIFQNQPHINKIIDYQDISIMKWRASQPSGIGIPENLQVCESHNIAFCGDWI HHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCEEEEECCC GNEGFGRMEGAILSALNLSHKINKLF CCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQNQQLYDIAIIGGGISSSVFTSSHIKNGFSGKLAIIENGRNLGGRSSTRYSQINNGWEL CCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEE NHGSPNLNICNKKNNQLLKTFIQELLDEEIIQQDTSEFIELNEDYIPSKIDSDFHSGTNY CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCC IPRTSMSELAKNIISYNNLRNQVDYFFETLIFKLDFKDNRWILTSKNGYEINSKFLICSS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCEEECCEEEEEEC NLILHKRSLDIMKISQTPLRKAIPIYKDKKLDKIINLLNQQNYIKRLTFMIYTNSYYDYK CEEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHEEEEEEECCCCCCH DDYKKKYRYFILNNVFEEKYKFERIIFQRQKNNKLGIVIHTRNNEFINEYFQNKNIKLFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCEEEEH KNLLLKFNQIFQNQPHINKIIDYQDISIMKWRASQPSGIGIPENLQVCESHNIAFCGDWI HHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCEEEEECCC GNEGFGRMEGAILSALNLSHKINKLF CCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA