| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is pykF [H]
Identifier: 123966228
GI number: 123966228
Start: 888621
End: 890411
Strand: Direct
Name: pykF [H]
Synonym: P9515_09951
Alternate gene names: 123966228
Gene position: 888621-890411 (Clockwise)
Preceding gene: 123966226
Following gene: 123966229
Centisome position: 52.14
GC content: 34.45
Gene sequence:
>1791_bases ATGTCGAATATTGATTTAAAAAGAAGAACAAAAATTGTAGCAACAATTGGACCAGCTACTCAGTCTGAAGAAGTAATTAC TGATCTTATAAAGGCTGGGGTAACAACATTCCGATTAAATTTTTCCCATGGCGATCATAAAGATCATGAAGAAAGGATTA AAACTATAAGAAAAGTTTCTAAAAATCTTGATCTAGATGTAGGAATACTACAAGATCTGCAAGGACCTAAAATAAGACTA GGAAGATTTAAAGATGGTCCCGTTAAAGTAAAAAAAGGAGATAAATTTACATTGACTTCTAACGAAGTTGAATGCACTAA AAGTATTGCAAACGTTACTTATAATAGACTCGCGCAGGAAGTTACCGAAGGCAAAAGAATATTATTAGACGATGGTAAAA TTGAAATGATTGTTGAAAAGGTTGACTTACCAAATAATTTATTAAAGTGTAAAGTAACTGTCGGTGGGGTACTTTCTAAC AATAAAGGAGTTAATTTTCCAGATGTGCAATTATCGGTAAAAGCTTTAACTGATAAAGATATAGATGATCTTGAATTTGG ATTAACCGCTGGAGTAGATTGGATAGCTCTAAGTTTTGTAAGAAACCCCTCAGATATTAATGAAATAAAAAATTTAATAA ATAAGAGTGGGCAATCAATACCTGTGATAGCAAAAATTGAAAAATTTGAAGCAATAGATCAAATAGATTCAATACTACCC TTGTGTGATGGAGTTATGGTTGCAAGAGGAGATTTAGGAGTTGAAATGCCAGCGGAGGAAGTTCCACTTTTACAAAAAGA GTTAATAAGGAAAGCTAATACATTTGGGATCCCTATAATCACGGCTACACAAATGCTTGACTCCATGGCATCAAATCCCA GACCAACACGAGCGGAAGTTAGTGATGTGGCTAACGCAATTCTTGATGGGACTGATGCAGTTATGCTCTCAAATGAAACT GCCGTAGGTGACTATCCTGTAGAGGCTGTTGAAACTATGGCTACTATTGCCAGAAGAATTGAAAGAGATTATCCATTAAA AGCAATCGAGAGTAATCTGCCTAGTACTATCCCAAATGCAATAAGTGCTGCAGTAAGCAATATTGCGAGGCAGCTTGACG CTGGAGCAATAATTCCTTTAACTAAATCAGGATCCACAGCACGTAATGTAAGTAAGTTCAGACCACCTACTCCTATCCTT GCCACGACTACTGAGAAGAGTGTCGCAAGAAGATTACAACTTGTGTGGGGAGTGACACCATTATTAGTAAAATCTGACGA TAGAACAGCAAGAACATTTAGTATTGCAATGCAAATAGCTCAAGAAATGGGGATTCTTAAGCAAGGAGACTTAGTAGTAC AAACTGCTGGAACTTTGACAGGAATAAGTGGATCTACTGACCTTATAAAAGTTGGCCTAGTAAGAAAAGTGATAACCCGA GGAATATCAATTGGAGAAATAGGTGTTACAGGTAAAGCGAGAAATATAGAAACAAGTCTTGATTTATCATTAATAACTCA CGGTGAAATATTATTTGTATCTAAGAATCTATTAAAAGATTTACCTTACTCAAAAAAAATCACAGGCATCGTTACTGATG AAACTGTTGATGAATGTTATAAGATTTTTAAAAAAAATAAAATTAAAATATCTTCAATTTGTAATTTATCTACTATTGAT AATCAGGTAACAAATGGTGATGTAATAACACTACAACTTAATGAAGGAGTAATTTATATGGGACAGATAGAGGAAGATGA AGAGGCACTAGACAGATATAAATATGTCTAG
Upstream 100 bases:
>100_bases TGTCAATCGAGCTTTTTTCTGATAAGTTTTGAAATCCATAGATTAAATAACTAACTTTAGGTATGTTAAATTTATTTATA TCTAGCAATATTATTTATAT
Downstream 100 bases:
>100_bases GAATATATCTTTTAAAGAAGCTTTTAAAATGGCTTGCAAAACATTAGTTTCTAATAAATTGAGAAGTTCCCTTACTATGT TGGGGATAGTTATAGGAAAT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 2 [H]
Number of amino acids: Translated: 596; Mature: 595
Protein sequence:
>596_residues MSNIDLKRRTKIVATIGPATQSEEVITDLIKAGVTTFRLNFSHGDHKDHEERIKTIRKVSKNLDLDVGILQDLQGPKIRL GRFKDGPVKVKKGDKFTLTSNEVECTKSIANVTYNRLAQEVTEGKRILLDDGKIEMIVEKVDLPNNLLKCKVTVGGVLSN NKGVNFPDVQLSVKALTDKDIDDLEFGLTAGVDWIALSFVRNPSDINEIKNLINKSGQSIPVIAKIEKFEAIDQIDSILP LCDGVMVARGDLGVEMPAEEVPLLQKELIRKANTFGIPIITATQMLDSMASNPRPTRAEVSDVANAILDGTDAVMLSNET AVGDYPVEAVETMATIARRIERDYPLKAIESNLPSTIPNAISAAVSNIARQLDAGAIIPLTKSGSTARNVSKFRPPTPIL ATTTEKSVARRLQLVWGVTPLLVKSDDRTARTFSIAMQIAQEMGILKQGDLVVQTAGTLTGISGSTDLIKVGLVRKVITR GISIGEIGVTGKARNIETSLDLSLITHGEILFVSKNLLKDLPYSKKITGIVTDETVDECYKIFKKNKIKISSICNLSTID NQVTNGDVITLQLNEGVIYMGQIEEDEEALDRYKYV
Sequences:
>Translated_596_residues MSNIDLKRRTKIVATIGPATQSEEVITDLIKAGVTTFRLNFSHGDHKDHEERIKTIRKVSKNLDLDVGILQDLQGPKIRL GRFKDGPVKVKKGDKFTLTSNEVECTKSIANVTYNRLAQEVTEGKRILLDDGKIEMIVEKVDLPNNLLKCKVTVGGVLSN NKGVNFPDVQLSVKALTDKDIDDLEFGLTAGVDWIALSFVRNPSDINEIKNLINKSGQSIPVIAKIEKFEAIDQIDSILP LCDGVMVARGDLGVEMPAEEVPLLQKELIRKANTFGIPIITATQMLDSMASNPRPTRAEVSDVANAILDGTDAVMLSNET AVGDYPVEAVETMATIARRIERDYPLKAIESNLPSTIPNAISAAVSNIARQLDAGAIIPLTKSGSTARNVSKFRPPTPIL ATTTEKSVARRLQLVWGVTPLLVKSDDRTARTFSIAMQIAQEMGILKQGDLVVQTAGTLTGISGSTDLIKVGLVRKVITR GISIGEIGVTGKARNIETSLDLSLITHGEILFVSKNLLKDLPYSKKITGIVTDETVDECYKIFKKNKIKISSICNLSTID NQVTNGDVITLQLNEGVIYMGQIEEDEEALDRYKYV >Mature_595_residues SNIDLKRRTKIVATIGPATQSEEVITDLIKAGVTTFRLNFSHGDHKDHEERIKTIRKVSKNLDLDVGILQDLQGPKIRLG RFKDGPVKVKKGDKFTLTSNEVECTKSIANVTYNRLAQEVTEGKRILLDDGKIEMIVEKVDLPNNLLKCKVTVGGVLSNN KGVNFPDVQLSVKALTDKDIDDLEFGLTAGVDWIALSFVRNPSDINEIKNLINKSGQSIPVIAKIEKFEAIDQIDSILPL CDGVMVARGDLGVEMPAEEVPLLQKELIRKANTFGIPIITATQMLDSMASNPRPTRAEVSDVANAILDGTDAVMLSNETA VGDYPVEAVETMATIARRIERDYPLKAIESNLPSTIPNAISAAVSNIARQLDAGAIIPLTKSGSTARNVSKFRPPTPILA TTTEKSVARRLQLVWGVTPLLVKSDDRTARTFSIAMQIAQEMGILKQGDLVVQTAGTLTGISGSTDLIKVGLVRKVITRG ISIGEIGVTGKARNIETSLDLSLITHGEILFVSKNLLKDLPYSKKITGIVTDETVDECYKIFKKNKIKISSICNLSTIDN QVTNGDVITLQLNEGVIYMGQIEEDEEALDRYKYV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=488, Percent_Identity=40.3688524590164, Blast_Score=335, Evalue=5e-92, Organism=Homo sapiens, GI32967597, Length=490, Percent_Identity=40.2040816326531, Blast_Score=332, Evalue=8e-91, Organism=Homo sapiens, GI10835121, Length=490, Percent_Identity=40.2040816326531, Blast_Score=332, Evalue=9e-91, Organism=Homo sapiens, GI33286422, Length=488, Percent_Identity=39.7540983606557, Blast_Score=331, Evalue=1e-90, Organism=Homo sapiens, GI33286420, Length=488, Percent_Identity=39.7540983606557, Blast_Score=331, Evalue=1e-90, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=40.1384083044983, Blast_Score=202, Evalue=9e-52, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=40.1384083044983, Blast_Score=202, Evalue=9e-52, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=36.7088607594937, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=36.7088607594937, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=35.6481481481481, Blast_Score=128, Evalue=2e-29, Organism=Escherichia coli, GI1787965, Length=469, Percent_Identity=44.136460554371, Blast_Score=353, Evalue=1e-98, Organism=Escherichia coli, GI1788160, Length=473, Percent_Identity=41.2262156448203, Blast_Score=316, Evalue=2e-87, Organism=Caenorhabditis elegans, GI17544584, Length=481, Percent_Identity=39.0852390852391, Blast_Score=328, Evalue=6e-90, Organism=Caenorhabditis elegans, GI17506829, Length=487, Percent_Identity=38.8090349075975, Blast_Score=292, Evalue=3e-79, Organism=Caenorhabditis elegans, GI71984406, Length=487, Percent_Identity=38.8090349075975, Blast_Score=292, Evalue=3e-79, Organism=Caenorhabditis elegans, GI71984413, Length=487, Percent_Identity=38.8090349075975, Blast_Score=292, Evalue=3e-79, Organism=Caenorhabditis elegans, GI17506831, Length=487, Percent_Identity=38.8090349075975, Blast_Score=291, Evalue=7e-79, Organism=Saccharomyces cerevisiae, GI6319279, Length=487, Percent_Identity=39.6303901437372, Blast_Score=303, Evalue=6e-83, Organism=Saccharomyces cerevisiae, GI6324923, Length=479, Percent_Identity=38.8308977035491, Blast_Score=302, Evalue=1e-82, Organism=Drosophila melanogaster, GI24648964, Length=488, Percent_Identity=39.7540983606557, Blast_Score=318, Evalue=5e-87, Organism=Drosophila melanogaster, GI28571814, Length=488, Percent_Identity=39.7540983606557, Blast_Score=317, Evalue=1e-86, Organism=Drosophila melanogaster, GI24648966, Length=406, Percent_Identity=40.3940886699507, Blast_Score=288, Evalue=6e-78, Organism=Drosophila melanogaster, GI24581235, Length=487, Percent_Identity=33.8809034907598, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24646914, Length=329, Percent_Identity=38.9057750759878, Blast_Score=197, Evalue=1e-50,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 65071; Mature: 64940
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIDLKRRTKIVATIGPATQSEEVITDLIKAGVTTFRLNFSHGDHKDHEERIKTIRKVS CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH KNLDLDVGILQDLQGPKIRLGRFKDGPVKVKKGDKFTLTSNEVECTKSIANVTYNRLAQE HCCCCCHHHHHCCCCCCEEECCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHH VTEGKRILLDDGKIEMIVEKVDLPNNLLKCKVTVGGVLSNNKGVNFPDVQLSVKALTDKD HHCCCEEEEECCCEEEEEEECCCCCCEEEEEEEECEEEECCCCCCCCCCEEEEEECCCCC IDDLEFGLTAGVDWIALSFVRNPSDINEIKNLINKSGQSIPVIAKIEKFEAIDQIDSILP CHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH LCDGVMVARGDLGVEMPAEEVPLLQKELIRKANTFGIPIITATQMLDSMASNPRPTRAEV HHCCEEEEECCCCCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHH SDVANAILDGTDAVMLSNETAVGDYPVEAVETMATIARRIERDYPLKAIESNLPSTIPNA HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHH ISAAVSNIARQLDAGAIIPLTKSGSTARNVSKFRPPTPILATTTEKSVARRLQLVWGVTP HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCE LLVKSDDRTARTFSIAMQIAQEMGILKQGDLVVQTAGTLTGISGSTDLIKVGLVRKVITR EEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHC GISIGEIGVTGKARNIETSLDLSLITHGEILFVSKNLLKDLPYSKKITGIVTDETVDECY CCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEHHHHHHCCCCCCEEEEECHHHHHHHH KIFKKNKIKISSICNLSTIDNQVTNGDVITLQLNEGVIYMGQIEEDEEALDRYKYV HHHHCCCEEEECCCCCHHHCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure SNIDLKRRTKIVATIGPATQSEEVITDLIKAGVTTFRLNFSHGDHKDHEERIKTIRKVS CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH KNLDLDVGILQDLQGPKIRLGRFKDGPVKVKKGDKFTLTSNEVECTKSIANVTYNRLAQE HCCCCCHHHHHCCCCCCEEECCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHH VTEGKRILLDDGKIEMIVEKVDLPNNLLKCKVTVGGVLSNNKGVNFPDVQLSVKALTDKD HHCCCEEEEECCCEEEEEEECCCCCCEEEEEEEECEEEECCCCCCCCCCEEEEEECCCCC IDDLEFGLTAGVDWIALSFVRNPSDINEIKNLINKSGQSIPVIAKIEKFEAIDQIDSILP CHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH LCDGVMVARGDLGVEMPAEEVPLLQKELIRKANTFGIPIITATQMLDSMASNPRPTRAEV HHCCEEEEECCCCCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHH SDVANAILDGTDAVMLSNETAVGDYPVEAVETMATIARRIERDYPLKAIESNLPSTIPNA HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHH ISAAVSNIARQLDAGAIIPLTKSGSTARNVSKFRPPTPILATTTEKSVARRLQLVWGVTP HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCE LLVKSDDRTARTFSIAMQIAQEMGILKQGDLVVQTAGTLTGISGSTDLIKVGLVRKVITR EEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHC GISIGEIGVTGKARNIETSLDLSLITHGEILFVSKNLLKDLPYSKKITGIVTDETVDECY CCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEHHHHHHCCCCCCEEEEECHHHHHHHH KIFKKNKIKISSICNLSTIDNQVTNGDVITLQLNEGVIYMGQIEEDEEALDRYKYV HHHHCCCEEEECCCCCHHHCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]