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The map label for this gene is salY [H]

Identifier: 123966229

GI number: 123966229

Start: 890404

End: 891633

Strand: Direct

Name: salY [H]

Synonym: P9515_09961

Alternate gene names: 123966229

Gene position: 890404-891633 (Clockwise)

Preceding gene: 123966228

Following gene: 123966230

Centisome position: 52.25

GC content: 33.66

Gene sequence:

>1230_bases
ATGTCTAGGAATATATCTTTTAAAGAAGCTTTTAAAATGGCTTGCAAAACATTAGTTTCTAATAAATTGAGAAGTTCCCT
TACTATGTTGGGGATAGTTATAGGAAATGCTTCAGTAATAACACTTGTTGGCCTAGGAAGAGGGGCTCAAACTCTAGCTA
AAAACCAATTAAGTAACTTAGGGGCGAATGTGTTATTTATAGTTCCAGGGAACAACGATACCCGAAGAAGAGGTATTTCA
TTTCCTAAAAATCTTGTTTTAGAGGATTCAATTGCAATTAATAATCAAGTCCCGAGTGTTAAAAAAGTTGCTCCACAAAT
CTCTGCAAATGAAATTGTTCAGTCAAATTCAAAAAGTTTAAATATTTCAATCGCTGGAGTCACACCAGAATTTCTAAAAG
TAAGAAGTTTTGAAGTAGATGAAGGTAGATTCATCTCTGAGAGTGATGTTAATTCAGCTAGAAGTTTTGTTGTGATAGGT
CCTGATCTAAAAGAAGAATTTTTCAAAGGGAAAAAAGTAATTGGAAAAAAAATAAGAATAAAAGACCATACTTATGAAAT
AATTGGAATGTTAAAACCGAAGGGCGCTGTTTTCGGTAGTAATCAAGATAAAAATGCATATATCCCACTTACTACAATGG
TGAACAGAATTACAGGGAAAGACCCTACATACGGAGTTAGTTTAAGTTTTATAAGTGTAGAGGCAATTAATAAAAACAAA
ACCAGTGCTGCGAAGTTTCAAATTACAAATTTATTACGTCAAAGACATAACATAATTAGAGACGATGATTTTGCCGTTAG
ATCTCAAGAAGATGCATTAAGCATAGTCACGAATATTACAAGTGGTCTTACTTTTTTACTAGCAGGTATCGGAGCCGTAT
CACTAATTGTTGGCGGTATAGGGATAATGAATATAATGCTTGTTTCTGTTAGCGAAAGAACAGAGGAGATTGGTCTTAGA
AAGGCAATAGGTGCTAGACAATCAGATATTCTTATTCAATTTTTATTTGAGGCATTAATACTATCTACTATTGGAGGTTT
AGTGGGAACAACAACTGGTCTAACAGGCGTATTTCTTTTAGGAGTAATTACTCCATTACCCGCCTCTGTTGGATTAACAA
CAACTTTTTCTACAATGATAATTTCAGGTTCAATAGGACTTATCTTTGGAGTATTACCAGCAAAAAGAGCATCAAAATTA
GATCCGATTGTCGCTCTAAGAAGTTTGTAA

Upstream 100 bases:

>100_bases
CAGGTAACAAATGGTGATGTAATAACACTACAACTTAATGAAGGAGTAATTTATATGGGACAGATAGAGGAAGATGAAGA
GGCACTAGACAGATATAAAT

Downstream 100 bases:

>100_bases
AACTAATTTATATATGCTCAATTTTAATAAAATTATTGAGGTACTTACAAGTCTACAAATTATTATAATTTCTACTTTTA
TTCCCTTCAGCATATCTCTA

Product: putative ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSRNISFKEAFKMACKTLVSNKLRSSLTMLGIVIGNASVITLVGLGRGAQTLAKNQLSNLGANVLFIVPGNNDTRRRGIS
FPKNLVLEDSIAINNQVPSVKKVAPQISANEIVQSNSKSLNISIAGVTPEFLKVRSFEVDEGRFISESDVNSARSFVVIG
PDLKEEFFKGKKVIGKKIRIKDHTYEIIGMLKPKGAVFGSNQDKNAYIPLTTMVNRITGKDPTYGVSLSFISVEAINKNK
TSAAKFQITNLLRQRHNIIRDDDFAVRSQEDALSIVTNITSGLTFLLAGIGAVSLIVGGIGIMNIMLVSVSERTEEIGLR
KAIGARQSDILIQFLFEALILSTIGGLVGTTTGLTGVFLLGVITPLPASVGLTTTFSTMIISGSIGLIFGVLPAKRASKL
DPIVALRSL

Sequences:

>Translated_409_residues
MSRNISFKEAFKMACKTLVSNKLRSSLTMLGIVIGNASVITLVGLGRGAQTLAKNQLSNLGANVLFIVPGNNDTRRRGIS
FPKNLVLEDSIAINNQVPSVKKVAPQISANEIVQSNSKSLNISIAGVTPEFLKVRSFEVDEGRFISESDVNSARSFVVIG
PDLKEEFFKGKKVIGKKIRIKDHTYEIIGMLKPKGAVFGSNQDKNAYIPLTTMVNRITGKDPTYGVSLSFISVEAINKNK
TSAAKFQITNLLRQRHNIIRDDDFAVRSQEDALSIVTNITSGLTFLLAGIGAVSLIVGGIGIMNIMLVSVSERTEEIGLR
KAIGARQSDILIQFLFEALILSTIGGLVGTTTGLTGVFLLGVITPLPASVGLTTTFSTMIISGSIGLIFGVLPAKRASKL
DPIVALRSL
>Mature_408_residues
SRNISFKEAFKMACKTLVSNKLRSSLTMLGIVIGNASVITLVGLGRGAQTLAKNQLSNLGANVLFIVPGNNDTRRRGISF
PKNLVLEDSIAINNQVPSVKKVAPQISANEIVQSNSKSLNISIAGVTPEFLKVRSFEVDEGRFISESDVNSARSFVVIGP
DLKEEFFKGKKVIGKKIRIKDHTYEIIGMLKPKGAVFGSNQDKNAYIPLTTMVNRITGKDPTYGVSLSFISVEAINKNKT
SAAKFQITNLLRQRHNIIRDDDFAVRSQEDALSIVTNITSGLTFLLAGIGAVSLIVGGIGIMNIMLVSVSERTEEIGLRK
AIGARQSDILIQFLFEALILSTIGGLVGTTTGLTGVFLLGVITPLPASVGLTTTFSTMIISGSIGLIFGVLPAKRASKLD
PIVALRSL

Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=407, Percent_Identity=34.3980343980344, Blast_Score=211, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017911
- InterPro:   IPR003593
- InterPro:   IPR003838 [H]

Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43865; Mature: 43734

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: PS00053 RIBOSOMAL_S8

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNISFKEAFKMACKTLVSNKLRSSLTMLGIVIGNASVITLVGLGRGAQTLAKNQLSNL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHHC
GANVLFIVPGNNDTRRRGISFPKNLVLEDSIAINNQVPSVKKVAPQISANEIVQSNSKSL
CCCEEEEEECCCCHHHCCCCCCCCEEEECCEEECCCCCCHHHHCCCCCHHHHHHCCCCEE
NISIAGVTPEFLKVRSFEVDEGRFISESDVNSARSFVVIGPDLKEEFFKGKKVIGKKIRI
EEEEECCCHHHHHEEEEECCCCCEECCCCCCCCCEEEEECCCHHHHHHCCHHHHCCEEEE
KDHTYEIIGMLKPKGAVFGSNQDKNAYIPLTTMVNRITGKDPTYGVSLSFISVEAINKNK
ECCCEEEEEEECCCCCEECCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEEEEEEECCCC
TSAAKFQITNLLRQRHNIIRDDDFAVRSQEDALSIVTNITSGLTFLLAGIGAVSLIVGGI
CHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIMNIMLVSVSERTEEIGLRKAIGARQSDILIQFLFEALILSTIGGLVGTTTGLTGVFLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVITPLPASVGLTTTFSTMIISGSIGLIFGVLPAKRASKLDPIVALRSL
HHHHCCCCCCCCHHHHHHHHEECCHHHHHCCCCCHHHCCCCHHHHHHCC
>Mature Secondary Structure 
SRNISFKEAFKMACKTLVSNKLRSSLTMLGIVIGNASVITLVGLGRGAQTLAKNQLSNL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHHC
GANVLFIVPGNNDTRRRGISFPKNLVLEDSIAINNQVPSVKKVAPQISANEIVQSNSKSL
CCCEEEEEECCCCHHHCCCCCCCCEEEECCEEECCCCCCHHHHCCCCCHHHHHHCCCCEE
NISIAGVTPEFLKVRSFEVDEGRFISESDVNSARSFVVIGPDLKEEFFKGKKVIGKKIRI
EEEEECCCHHHHHEEEEECCCCCEECCCCCCCCCEEEEECCCHHHHHHCCHHHHCCEEEE
KDHTYEIIGMLKPKGAVFGSNQDKNAYIPLTTMVNRITGKDPTYGVSLSFISVEAINKNK
ECCCEEEEEEECCCCCEECCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEEEEEEECCCC
TSAAKFQITNLLRQRHNIIRDDDFAVRSQEDALSIVTNITSGLTFLLAGIGAVSLIVGGI
CHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIMNIMLVSVSERTEEIGLRKAIGARQSDILIQFLFEALILSTIGGLVGTTTGLTGVFLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVITPLPASVGLTTTFSTMIISGSIGLIFGVLPAKRASKLDPIVALRSL
HHHHCCCCCCCCHHHHHHHHEECCHHHHHCCCCCHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA