| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966145
Identifier: 123966145
GI number: 123966145
Start: 814035
End: 814664
Strand: Direct
Name: 123966145
Synonym: P9515_09121
Alternate gene names: NA
Gene position: 814035-814664 (Clockwise)
Preceding gene: 123966144
Following gene: 123966146
Centisome position: 47.77
GC content: 25.24
Gene sequence:
>630_bases ATGTTGCAAAATAAAATTTCATTTAATCAATCATCAGTCAGTCTTGAAATTATTGGATTACCTGATTATTCGAATAACGA AAATATAGATAATATATCAATTATTTCTCAATGGAAACTTATGATTATTGACAAACCAGTTATTGAGGGAAACATAGATC ATCTAAGTTCGGTAATGAAGGCATTCTATTCTTATTCTATTTCTTTTTTACATGATGAAATCGCATTATATGAGTCAAGT TTTATAGATATTAAACCTCAAAATTACTATACACATATTCTCCATTTAAAAAGTTCAAAACCTGAGGTTAAGCCATTAAA TATTAAAATTGGCAATTCAACATTAGCAGACATAATCTCTTGCTTTGATCAATTAACCTCTTCAAGTCAAGTGAAAAAAA TATCTTCTAGTGAATTTAAAAGGTTAAAGAAAAAAAAGAAAAAAAATTTATTGGATAAAAAAAATATTTCAAATTTATTA TTGCCACCATTAGTTTCCTTATTCTCCATTTTTCTTGTATCTACTGCTTTCATCTATTTTTATGATGGAAATGATAGTGA TAGTAATCGCTCATTATTAAAGAATAAAAACAAACTTATTAGCATTGAATCCATAAACAAGTTACTATAA
Upstream 100 bases:
>100_bases TATAATGACGAAGTTTTCATAAAAATCATACTTACATTAGCGTTTTGCATTTCAGATGATGGTTTTTTAAAATTGAAAAC AACTCTCCTTAATTATTGAT
Downstream 100 bases:
>100_bases AAAAAATAATTCTCATCTAAGAAGAATTATTAAATAAATTGCGTAATTTTTATAAATGGTTGATTTGAAAATACCCAATT TGAATAAGAAATCTAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MLQNKISFNQSSVSLEIIGLPDYSNNENIDNISIISQWKLMIIDKPVIEGNIDHLSSVMKAFYSYSISFLHDEIALYESS FIDIKPQNYYTHILHLKSSKPEVKPLNIKIGNSTLADIISCFDQLTSSSQVKKISSSEFKRLKKKKKKNLLDKKNISNLL LPPLVSLFSIFLVSTAFIYFYDGNDSDSNRSLLKNKNKLISIESINKLL
Sequences:
>Translated_209_residues MLQNKISFNQSSVSLEIIGLPDYSNNENIDNISIISQWKLMIIDKPVIEGNIDHLSSVMKAFYSYSISFLHDEIALYESS FIDIKPQNYYTHILHLKSSKPEVKPLNIKIGNSTLADIISCFDQLTSSSQVKKISSSEFKRLKKKKKKNLLDKKNISNLL LPPLVSLFSIFLVSTAFIYFYDGNDSDSNRSLLKNKNKLISIESINKLL >Mature_209_residues MLQNKISFNQSSVSLEIIGLPDYSNNENIDNISIISQWKLMIIDKPVIEGNIDHLSSVMKAFYSYSISFLHDEIALYESS FIDIKPQNYYTHILHLKSSKPEVKPLNIKIGNSTLADIISCFDQLTSSSQVKKISSSEFKRLKKKKKKNLLDKKNISNLL LPPLVSLFSIFLVSTAFIYFYDGNDSDSNRSLLKNKNKLISIESINKLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23814; Mature: 23814
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQNKISFNQSSVSLEIIGLPDYSNNENIDNISIISQWKLMIIDKPVIEGNIDHLSSVMK CCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHH AFYSYSISFLHDEIALYESSFIDIKPQNYYTHILHLKSSKPEVKPLNIKIGNSTLADIIS HHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEEECCCCCCEEEEEEECCHHHHHHHH CFDQLTSSSQVKKISSSEFKRLKKKKKKNLLDKKNISNLLLPPLVSLFSIFLVSTAFIYF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHEEEE YDGNDSDSNRSLLKNKNKLISIESINKLL ECCCCCCCCHHHHHCCCCEEEHHHHHHCC >Mature Secondary Structure MLQNKISFNQSSVSLEIIGLPDYSNNENIDNISIISQWKLMIIDKPVIEGNIDHLSSVMK CCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHH AFYSYSISFLHDEIALYESSFIDIKPQNYYTHILHLKSSKPEVKPLNIKIGNSTLADIIS HHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEEECCCCCCEEEEEEECCHHHHHHHH CFDQLTSSSQVKKISSSEFKRLKKKKKKNLLDKKNISNLLLPPLVSLFSIFLVSTAFIYF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHEEEE YDGNDSDSNRSLLKNKNKLISIESINKLL ECCCCCCCCHHHHHCCCCEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA