Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966146

Identifier: 123966146

GI number: 123966146

Start: 814720

End: 815088

Strand: Direct

Name: 123966146

Synonym: P9515_09131

Alternate gene names: NA

Gene position: 814720-815088 (Clockwise)

Preceding gene: 123966145

Following gene: 123966149

Centisome position: 47.81

GC content: 20.33

Gene sequence:

>369_bases
ATGGTTGATTTGAAAATACCCAATTTGAATAAGAAATCTAATAAATTTTTTTTAAAAAAGAAGTTAACTTTAAGAAGAAA
ATCCAAGAGAAAGCTAATAAATGAAAGCATTATTATGTTGTCTCTTAGTATATTTATTTTTTATCTTAATTATATAATTC
CAAATCAAATATCCATCTTAAATAATCTGTCTAATAATTTCAATAAATTATTTGCTAATTTTTTGTTGTCATTGTCATAT
TTTTACGAAATATGTATAGGTTTGTTTATTATTATCTCTTTAATATTTGCTTTGATTCTGATGTTGGGCTCCCTCTCAAG
ATTTATTAAAATTATGAAAAGAAAAAAAAGAAGAATTAATTTAAATTAA

Upstream 100 bases:

>100_bases
AAAAACAAACTTATTAGCATTGAATCCATAAACAAGTTACTATAAAAAAAATAATTCTCATCTAAGAAGAATTATTAAAT
AAATTGCGTAATTTTTATAA

Downstream 100 bases:

>100_bases
AAATTTAAATAGGATTCATTAATCCTCCACTTCCTGAATCAGAATCGTCATCGTCATTTTCAGTCTCAAAATCAATTAGT
GCGTAAGCTCCAACCGCAAT

Product: nucleoside diphosphate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MVDLKIPNLNKKSNKFFLKKKLTLRRKSKRKLINESIIMLSLSIFIFYLNYIIPNQISILNNLSNNFNKLFANFLLSLSY
FYEICIGLFIIISLIFALILMLGSLSRFIKIMKRKKRRINLN

Sequences:

>Translated_122_residues
MVDLKIPNLNKKSNKFFLKKKLTLRRKSKRKLINESIIMLSLSIFIFYLNYIIPNQISILNNLSNNFNKLFANFLLSLSY
FYEICIGLFIIISLIFALILMLGSLSRFIKIMKRKKRRINLN
>Mature_122_residues
MVDLKIPNLNKKSNKFFLKKKLTLRRKSKRKLINESIIMLSLSIFIFYLNYIIPNQISILNNLSNNFNKLFANFLLSLSY
FYEICIGLFIIISLIFALILMLGSLSRFIKIMKRKKRRINLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14481; Mature: 14481

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDLKIPNLNKKSNKFFLKKKLTLRRKSKRKLINESIIMLSLSIFIFYLNYIIPNQISIL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
NNLSNNFNKLFANFLLSLSYFYEICIGLFIIISLIFALILMLGSLSRFIKIMKRKKRRIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LN
CC
>Mature Secondary Structure
MVDLKIPNLNKKSNKFFLKKKLTLRRKSKRKLINESIIMLSLSIFIFYLNYIIPNQISIL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
NNLSNNFNKLFANFLLSLSYFYEICIGLFIIISLIFALILMLGSLSRFIKIMKRKKRRIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA