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The map label for this gene is rpe [H]

Identifier: 123966052

GI number: 123966052

Start: 737233

End: 737988

Strand: Direct

Name: rpe [H]

Synonym: P9515_08171

Alternate gene names: 123966052

Gene position: 737233-737988 (Clockwise)

Preceding gene: 123966044

Following gene: 123966058

Centisome position: 43.26

GC content: 37.96

Gene sequence:

>756_bases
ATGACCGAATCTAATTCTAAAAACTCATATAGTGTTAATCGACCAATTCAAATAATTCCTTCTGTCTTACCTGCAGATTG
GGCAAATATGGGGGGATGTGTAAAAGATCTTGAGGAAGCAGGGGTTGATCGTATTCAATTTGATGTAATGGATGGTAATT
TTGTTCCAAATCTTACATTTGGTCCTGAAATGATTGCTGCATGTAGGAAATATTGCAAGGTTCCTTTTGAGACTCAATTG
ATGGTAAGCCAATATAACTGTGAGACAATGCTCGAGTCATACGTTAATTCAACAAAAGGACCAAATGGAGAGCCAGGAGT
TGTAATCGCTCATGCTGAATCAAACGTTCACCTTCACAGGATTCTTGGAAGGATAAGAGATCTTGGTGGATCGCCATCGG
TTGCATTAAATCCTCATACACCATTTGAAATGATTGAAAATATAATGGATATGGTGGATCACGTCTTAGTAATGACAGTT
AACCCAGGATTTGGAGGTCAAGCATACATACCAACTATGCTAAGTAAAATAAGAAAAATTAGAGAATTTGTAATTGAAAA
GAATTTGAATATAGACATCGAAGTTGATGGTGGAATAAAAGCAAATTGGACCATTTCGCAATGTGCAGCGGCTGGGGCTA
ATTGTTTTATCGCAGGGAGTGGAATGTTTGCTTATCCCACATTGAAAGAGGGTTGCGATGAATTAAGGTCAGTTGCCCAA
GATGCTCAAAATGGAAAGATAATTTCAGAGCCCTAA

Upstream 100 bases:

>100_bases
TTTTTTTAACTCTTTGCAGCTGTTACTTTATCAGGCCATGACTTTAAATTAGGAATAAGCAACCAAATATAGTATCTTTA
TTAAATATTTTAAAAATTAA

Downstream 100 bases:

>100_bases
GAATGAACATTTGAAATTAATTTAATATTCCAAATATCCAGCCATAACTATGCAAACCTATACCTAAAAAATTAACTCCG
AGATAACATATTAGTACAAC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTESNSKNSYSVNRPIQIIPSVLPADWANMGGCVKDLEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYCKVPFETQL
MVSQYNCETMLESYVNSTKGPNGEPGVVIAHAESNVHLHRILGRIRDLGGSPSVALNPHTPFEMIENIMDMVDHVLVMTV
NPGFGGQAYIPTMLSKIRKIREFVIEKNLNIDIEVDGGIKANWTISQCAAAGANCFIAGSGMFAYPTLKEGCDELRSVAQ
DAQNGKIISEP

Sequences:

>Translated_251_residues
MTESNSKNSYSVNRPIQIIPSVLPADWANMGGCVKDLEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYCKVPFETQL
MVSQYNCETMLESYVNSTKGPNGEPGVVIAHAESNVHLHRILGRIRDLGGSPSVALNPHTPFEMIENIMDMVDHVLVMTV
NPGFGGQAYIPTMLSKIRKIREFVIEKNLNIDIEVDGGIKANWTISQCAAAGANCFIAGSGMFAYPTLKEGCDELRSVAQ
DAQNGKIISEP
>Mature_250_residues
TESNSKNSYSVNRPIQIIPSVLPADWANMGGCVKDLEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYCKVPFETQLM
VSQYNCETMLESYVNSTKGPNGEPGVVIAHAESNVHLHRILGRIRDLGGSPSVALNPHTPFEMIENIMDMVDHVLVMTVN
PGFGGQAYIPTMLSKIRKIREFVIEKNLNIDIEVDGGIKANWTISQCAAAGANCFIAGSGMFAYPTLKEGCDELRSVAQD
AQNGKIISEP

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=234, Percent_Identity=32.4786324786325, Blast_Score=114, Evalue=7e-26,
Organism=Homo sapiens, GI219879828, Length=232, Percent_Identity=31.0344827586207, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI24307923, Length=113, Percent_Identity=34.5132743362832, Blast_Score=71, Evalue=8e-13,
Organism=Escherichia coli, GI1789788, Length=221, Percent_Identity=38.4615384615385, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1790523, Length=210, Percent_Identity=31.9047619047619, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1790754, Length=180, Percent_Identity=26.1111111111111, Blast_Score=71, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17552948, Length=212, Percent_Identity=35.377358490566, Blast_Score=113, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6322341, Length=217, Percent_Identity=31.3364055299539, Blast_Score=106, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24586301, Length=231, Percent_Identity=37.2294372294372, Blast_Score=132, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 27429; Mature: 27298

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESNSKNSYSVNRPIQIIPSVLPADWANMGGCVKDLEEAGVDRIQFDVMDGNFVPNLTF
CCCCCCCCCEECCCCHHHHCCCCCCCHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC
GPEMIAACRKYCKVPFETQLMVSQYNCETMLESYVNSTKGPNGEPGVVIAHAESNVHLHR
CHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHH
ILGRIRDLGGSPSVALNPHTPFEMIENIMDMVDHVLVMTVNPGFGGQAYIPTMLSKIRKI
HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH
REFVIEKNLNIDIEVDGGIKANWTISQCAAAGANCFIAGSGMFAYPTLKEGCDELRSVAQ
HHHHHHCCCCEEEEECCCEEECCCHHHHHHCCCCEEEECCCCEECCCHHHHHHHHHHHHH
DAQNGKIISEP
HHHCCEEECCC
>Mature Secondary Structure 
TESNSKNSYSVNRPIQIIPSVLPADWANMGGCVKDLEEAGVDRIQFDVMDGNFVPNLTF
CCCCCCCCEECCCCHHHHCCCCCCCHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC
GPEMIAACRKYCKVPFETQLMVSQYNCETMLESYVNSTKGPNGEPGVVIAHAESNVHLHR
CHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHH
ILGRIRDLGGSPSVALNPHTPFEMIENIMDMVDHVLVMTVNPGFGGQAYIPTMLSKIRKI
HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH
REFVIEKNLNIDIEVDGGIKANWTISQCAAAGANCFIAGSGMFAYPTLKEGCDELRSVAQ
HHHHHHCCCCEEEEECCCEEECCCHHHHHHCCCCEEEECCCCEECCCHHHHHHHHHHHHH
DAQNGKIISEP
HHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA