| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is yhhX [C]
Identifier: 123966034
GI number: 123966034
Start: 720989
End: 722092
Strand: Direct
Name: yhhX [C]
Synonym: P9515_07991
Alternate gene names: 123966034
Gene position: 720989-722092 (Clockwise)
Preceding gene: 123966033
Following gene: 123966035
Centisome position: 42.31
GC content: 33.61
Gene sequence:
>1104_bases ATGAATTTTAGTAATGCTACTGACAAATTAAGAGTCGCAATTGCTGGTTTGGGATTTGGAAAAAAAATTCATTTGGAAGC ATTAAAAGAATCAGATTATTTAATTCCAACTGCAATTTTTCACTACAAGAAAGAAAAAGGACCATCTTTAGAGAAGGAAA CTGGGTTAAATTTTTATCATGATTGGGGAGAATTAGTTAAATCCAAAGATATAGACGGAATCATAATTGCTACATCTCCC GAATCAAGATTTGAATTGGCAAAGGAAGCTCTTGAGAATAATAAACATCTTTTATTAGAGAAACCTGTAGCCTTAACCTC CGAGGAAATTAAAGAACTTCAAAGAATATCATTAGTTAATAATTTGAGTGTTTGTGTAGATTTTGAATATAGAGCAGTAC CACTTTTCCTACAAACCAAGAAAATGATAGATGAGAATATTTTAGGAAAAATATATTTAATTAAGCTTGATTGGTTGATG GGTAGCCGGTCAGATCCCAATAGGGCTTGGAATTGGTATTCATTAAAAGAAAAAGGTGGTGGGGTTGTTGGAGCTTTAGG TACTCATGCATTTGATATGTTGAACTGGTTTTTTGGAGAATCGATTGTAGTATCCGGGAAATTATCAACATCAATCAAGA AAAGATCCTTACCTAATTCCTCTAAGTTTTTGAAAGTAACAAGTGAGGATATTTGCATAGCTAACCTTGAAATAAAAACT TTCGATGACATCATAGTTCCATGTCAGGTTTCTTTATCCTCGATTTCAAAGTGTGGAAGAGGATTTAGTTTGGAAGTATA TGGAAGTGAAGGCTCACTTTTCCTTAAGAGTGAGAATCAAAAAGATTATGTTCATGGTTTTAATTTAAAGATTTCAAATC GAGAAGATAAGACATACAATTTATCCGCTGATCCACGCTATGATTTTGAAAAAACCTGGACTGATGGAAGAATTGCACCT GTCCAGAGAATTCAAAGTTTATGGGCTCATAGTATCAAGAATCAAACTCCAGTAATCCCAGGACTGTCTGAGGGACTTAA TAGTCAAAGAGTTTGTGAAGCTATAAGAAAATCTGCAGAGAGCGGTTTAAATGTAAGAATTTAG
Upstream 100 bases:
>100_bases TTAATGGAATCCCACAGCTCAGTTCAAAGTGGCAAACATCAAATAATGATGAACTTATTGATGTTGTCATCGAAAAAAGC TGTTCTGAGATCATAAATTA
Downstream 100 bases:
>100_bases TTTTTAACATTAGTAAGTAACAATTATTACTCGAATAGGTATTGAATTGATTTTATTTTTTCTTCATATTCTGGAAAAAT CAACTGAACCTAAATTTTTA
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MNFSNATDKLRVAIAGLGFGKKIHLEALKESDYLIPTAIFHYKKEKGPSLEKETGLNFYHDWGELVKSKDIDGIIIATSP ESRFELAKEALENNKHLLLEKPVALTSEEIKELQRISLVNNLSVCVDFEYRAVPLFLQTKKMIDENILGKIYLIKLDWLM GSRSDPNRAWNWYSLKEKGGGVVGALGTHAFDMLNWFFGESIVVSGKLSTSIKKRSLPNSSKFLKVTSEDICIANLEIKT FDDIIVPCQVSLSSISKCGRGFSLEVYGSEGSLFLKSENQKDYVHGFNLKISNREDKTYNLSADPRYDFEKTWTDGRIAP VQRIQSLWAHSIKNQTPVIPGLSEGLNSQRVCEAIRKSAESGLNVRI
Sequences:
>Translated_367_residues MNFSNATDKLRVAIAGLGFGKKIHLEALKESDYLIPTAIFHYKKEKGPSLEKETGLNFYHDWGELVKSKDIDGIIIATSP ESRFELAKEALENNKHLLLEKPVALTSEEIKELQRISLVNNLSVCVDFEYRAVPLFLQTKKMIDENILGKIYLIKLDWLM GSRSDPNRAWNWYSLKEKGGGVVGALGTHAFDMLNWFFGESIVVSGKLSTSIKKRSLPNSSKFLKVTSEDICIANLEIKT FDDIIVPCQVSLSSISKCGRGFSLEVYGSEGSLFLKSENQKDYVHGFNLKISNREDKTYNLSADPRYDFEKTWTDGRIAP VQRIQSLWAHSIKNQTPVIPGLSEGLNSQRVCEAIRKSAESGLNVRI >Mature_367_residues MNFSNATDKLRVAIAGLGFGKKIHLEALKESDYLIPTAIFHYKKEKGPSLEKETGLNFYHDWGELVKSKDIDGIIIATSP ESRFELAKEALENNKHLLLEKPVALTSEEIKELQRISLVNNLSVCVDFEYRAVPLFLQTKKMIDENILGKIYLIKLDWLM GSRSDPNRAWNWYSLKEKGGGVVGALGTHAFDMLNWFFGESIVVSGKLSTSIKKRSLPNSSKFLKVTSEDICIANLEIKT FDDIIVPCQVSLSSISKCGRGFSLEVYGSEGSLFLKSENQKDYVHGFNLKISNREDKTYNLSADPRYDFEKTWTDGRIAP VQRIQSLWAHSIKNQTPVIPGLSEGLNSQRVCEAIRKSAESGLNVRI
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 41287; Mature: 41287
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFSNATDKLRVAIAGLGFGKKIHLEALKESDYLIPTAIFHYKKEKGPSLEKETGLNFYH CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHH DWGELVKSKDIDGIIIATSPESRFELAKEALENNKHLLLEKPVALTSEEIKELQRISLVN HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHC NLSVCVDFEYRAVPLFLQTKKMIDENILGKIYLIKLDWLMGSRSDPNRAWNWYSLKEKGG CCEEEEEECCCEEEEEEHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCC GVVGALGTHAFDMLNWFFGESIVVSGKLSTSIKKRSLPNSSKFLKVTSEDICIANLEIKT EEEEEHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCEEEEEEEEEE FDDIIVPCQVSLSSISKCGRGFSLEVYGSEGSLFLKSENQKDYVHGFNLKISNREDKTYN CCCEEEEEEECHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCEEE LSADPRYDFEKTWTDGRIAPVQRIQSLWAHSIKNQTPVIPGLSEGLNSQRVCEAIRKSAE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHH SGLNVRI CCCEECC >Mature Secondary Structure MNFSNATDKLRVAIAGLGFGKKIHLEALKESDYLIPTAIFHYKKEKGPSLEKETGLNFYH CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHH DWGELVKSKDIDGIIIATSPESRFELAKEALENNKHLLLEKPVALTSEEIKELQRISLVN HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHC NLSVCVDFEYRAVPLFLQTKKMIDENILGKIYLIKLDWLMGSRSDPNRAWNWYSLKEKGG CCEEEEEECCCEEEEEEHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCC GVVGALGTHAFDMLNWFFGESIVVSGKLSTSIKKRSLPNSSKFLKVTSEDICIANLEIKT EEEEEHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCEEEEEEEEEE FDDIIVPCQVSLSSISKCGRGFSLEVYGSEGSLFLKSENQKDYVHGFNLKISNREDKTYN CCCEEEEEEECHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCEEE LSADPRYDFEKTWTDGRIAPVQRIQSLWAHSIKNQTPVIPGLSEGLNSQRVCEAIRKSAE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHH SGLNVRI CCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]