| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966033
Identifier: 123966033
GI number: 123966033
Start: 720600
End: 720989
Strand: Direct
Name: 123966033
Synonym: P9515_07981
Alternate gene names: NA
Gene position: 720600-720989 (Clockwise)
Preceding gene: 123966032
Following gene: 123966034
Centisome position: 42.28
GC content: 26.92
Gene sequence:
>390_bases ATGAAAATCGTTTCTAATTTAATTGGTCTATTTTTTATTTTTTTAATGTTTTTTTTTAATAATTCTAAATTGGCGTTCGG AAGTGGGAATGTAGATTGGATCCTTTTAAAAGAAAATAATGATGGAAAAGAATGGCTAGATATGGGTAGCATTAAGAAAT TTGATAATAATGAAATAAGTGTTTTAACTAAGTTTTTTAAAAATCCAAAAGATTCAAGCGATAAAGGTCAATTATCTCTT TACGTTATGAGAATTAACTGTGATGACAATAGATTTAAAGATACTTCTATTAATGGAATCCCACAGCTCAGTTCAAAGTG GCAAACATCAAATAATGATGAACTTATTGATGTTGTCATCGAAAAAAGCTGTTCTGAGATCATAAATTAA
Upstream 100 bases:
>100_bases TTCGTTGATGTGATAGTAAATAGGAAAGAACTTAAAAGTACTCTGACAAGTATTTTAAAAATTCATGGAGTAAAAGATCT TATGGGAGCAAATTAATAAG
Downstream 100 bases:
>100_bases TGAATTTTAGTAATGCTACTGACAAATTAAGAGTCGCAATTGCTGGTTTGGGATTTGGAAAAAAAATTCATTTGGAAGCA TTAAAAGAATCAGATTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKIVSNLIGLFFIFLMFFFNNSKLAFGSGNVDWILLKENNDGKEWLDMGSIKKFDNNEISVLTKFFKNPKDSSDKGQLSL YVMRINCDDNRFKDTSINGIPQLSSKWQTSNNDELIDVVIEKSCSEIIN
Sequences:
>Translated_129_residues MKIVSNLIGLFFIFLMFFFNNSKLAFGSGNVDWILLKENNDGKEWLDMGSIKKFDNNEISVLTKFFKNPKDSSDKGQLSL YVMRINCDDNRFKDTSINGIPQLSSKWQTSNNDELIDVVIEKSCSEIIN >Mature_129_residues MKIVSNLIGLFFIFLMFFFNNSKLAFGSGNVDWILLKENNDGKEWLDMGSIKKFDNNEISVLTKFFKNPKDSSDKGQLSL YVMRINCDDNRFKDTSINGIPQLSSKWQTSNNDELIDVVIEKSCSEIIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14816; Mature: 14816
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVSNLIGLFFIFLMFFFNNSKLAFGSGNVDWILLKENNDGKEWLDMGSIKKFDNNEIS CCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCHHHHHCCCCCCCCCCHHH VLTKFFKNPKDSSDKGQLSLYVMRINCDDNRFKDTSINGIPQLSSKWQTSNNDELIDVVI HHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH EKSCSEIIN HHHHHHHCC >Mature Secondary Structure MKIVSNLIGLFFIFLMFFFNNSKLAFGSGNVDWILLKENNDGKEWLDMGSIKKFDNNEIS CCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCHHHHHCCCCCCCCCCHHH VLTKFFKNPKDSSDKGQLSLYVMRINCDDNRFKDTSINGIPQLSSKWQTSNNDELIDVVI HHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH EKSCSEIIN HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA