| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965998
Identifier: 123965998
GI number: 123965998
Start: 693698
End: 694669
Strand: Direct
Name: 123965998
Synonym: P9515_07631
Alternate gene names: NA
Gene position: 693698-694669 (Clockwise)
Preceding gene: 123965997
Following gene: 123965999
Centisome position: 40.71
GC content: 27.78
Gene sequence:
>972_bases TTGAATATGGAAAATGCAATTAATATTCAATTCATCATTCCAACCTATAACGAGGAACACAACATAAATTCTTTATTTGA TACGTTATCGATAATGAAAAAAGAAGTAGAAAAACAATATCTCTCAGATAAGTTTAATTGGTCTTTGTTAGTAGCAGATA ATGCAAGTAATGATAAAACACTTGAAACTCTGGATTTCAATGGTAAGAAGTTTGAAAATCTAGAAATTCTTCCATTCTAC AAAAACTATGGATTTTCTTTTTCTACTTCATATCTACTGCACAAATCTTCAGGAGATATTTGTATCCTCATTCCTGCTGA TGGACAAATACCTATTGAAATTGTTATTAGAGGAATAGTTAATTCTATTGATAGCAATACCAATACTTTATTTGTAAGGG CCCCAGAAACTAAATCAAATTATCTTGGGATAAATATCATTAATAATTTCAAAAAATTGTTTTATTTGATGATAAATAAG TTTAATGAGGAAACTCCAAAAGGTTTTTTTGGAATGGGAGTTTATTTGGGTAATTCCTTAAAACCTGTTAGAGAACTACC TAAAGGTTTTGTTCCTTTTCAAATCAGAACGGTTTTACCTTCTTTGTTAGAGGATTACTCCATACTAAAGTTTAGAGAAT TAGATAGAAGTCAAGGGAAAAGTGGGTTTAATTTATCAAGCTATGCAAACGAAGCATTATCTATATTAATTAGATCTGAA TATATAAGCAGATATGCCGTGAAATTTATAATTTTGTCAATTTTCTTCCTTTTGTTTGCAGGTAGCTTAATTGTTTTCCT AATAAAGTTATTTATTCCTGGAGCTATTATTCCAGGTTTCACAAGTATAATATTGCTTGTTTTAACATCCTCAATGTTAA ACATCATTAGTATTTACTTTATTGCAATAAGATTAGAAAAAATATTATTAATGCCCTCAAATTATTCACCTAGAATAAAA AAAATAAAATAA
Upstream 100 bases:
>100_bases CTAAAGTTTTGAAAACAAGATTTTTCAGAATTTACTCTACTAAGTTAGAAATTTAGACAAAATTATAAATTCTAATAAGA TAAAAGTATCAAATATAAAT
Downstream 100 bases:
>100_bases GGGCTTTTAAATTTCTAAATAAGATTAATGAAATTCATCATTTTTTATTTGCTCTATTGGCAATCTTAGGAATTTTCTTT AATTATCTTTTATCTAACTA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MNMENAINIQFIIPTYNEEHNINSLFDTLSIMKKEVEKQYLSDKFNWSLLVADNASNDKTLETLDFNGKKFENLEILPFY KNYGFSFSTSYLLHKSSGDICILIPADGQIPIEIVIRGIVNSIDSNTNTLFVRAPETKSNYLGINIINNFKKLFYLMINK FNEETPKGFFGMGVYLGNSLKPVRELPKGFVPFQIRTVLPSLLEDYSILKFRELDRSQGKSGFNLSSYANEALSILIRSE YISRYAVKFIILSIFFLLFAGSLIVFLIKLFIPGAIIPGFTSIILLVLTSSMLNIISIYFIAIRLEKILLMPSNYSPRIK KIK
Sequences:
>Translated_323_residues MNMENAINIQFIIPTYNEEHNINSLFDTLSIMKKEVEKQYLSDKFNWSLLVADNASNDKTLETLDFNGKKFENLEILPFY KNYGFSFSTSYLLHKSSGDICILIPADGQIPIEIVIRGIVNSIDSNTNTLFVRAPETKSNYLGINIINNFKKLFYLMINK FNEETPKGFFGMGVYLGNSLKPVRELPKGFVPFQIRTVLPSLLEDYSILKFRELDRSQGKSGFNLSSYANEALSILIRSE YISRYAVKFIILSIFFLLFAGSLIVFLIKLFIPGAIIPGFTSIILLVLTSSMLNIISIYFIAIRLEKILLMPSNYSPRIK KIK >Mature_323_residues MNMENAINIQFIIPTYNEEHNINSLFDTLSIMKKEVEKQYLSDKFNWSLLVADNASNDKTLETLDFNGKKFENLEILPFY KNYGFSFSTSYLLHKSSGDICILIPADGQIPIEIVIRGIVNSIDSNTNTLFVRAPETKSNYLGINIINNFKKLFYLMINK FNEETPKGFFGMGVYLGNSLKPVRELPKGFVPFQIRTVLPSLLEDYSILKFRELDRSQGKSGFNLSSYANEALSILIRSE YISRYAVKFIILSIFFLLFAGSLIVFLIKLFIPGAIIPGFTSIILLVLTSSMLNIISIYFIAIRLEKILLMPSNYSPRIK KIK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36881; Mature: 36881
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMENAINIQFIIPTYNEEHNINSLFDTLSIMKKEVEKQYLSDKFNWSLLVADNASNDKT CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCE LETLDFNGKKFENLEILPFYKNYGFSFSTSYLLHKSSGDICILIPADGQIPIEIVIRGIV EEEECCCCCEECCEEEEEEHHCCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHH NSIDSNTNTLFVRAPETKSNYLGINIINNFKKLFYLMINKFNEETPKGFFGMGVYLGNSL HHCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCC KPVRELPKGFVPFQIRTVLPSLLEDYSILKFRELDRSQGKSGFNLSSYANEALSILIRSE HHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH YISRYAVKFIILSIFFLLFAGSLIVFLIKLFIPGAIIPGFTSIILLVLTSSMLNIISIYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH IAIRLEKILLMPSNYSPRIKKIK HHHHHHHHEECCCCCCCCCCCCC >Mature Secondary Structure MNMENAINIQFIIPTYNEEHNINSLFDTLSIMKKEVEKQYLSDKFNWSLLVADNASNDKT CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCE LETLDFNGKKFENLEILPFYKNYGFSFSTSYLLHKSSGDICILIPADGQIPIEIVIRGIV EEEECCCCCEECCEEEEEEHHCCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHH NSIDSNTNTLFVRAPETKSNYLGINIINNFKKLFYLMINKFNEETPKGFFGMGVYLGNSL HHCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCC KPVRELPKGFVPFQIRTVLPSLLEDYSILKFRELDRSQGKSGFNLSSYANEALSILIRSE HHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH YISRYAVKFIILSIFFLLFAGSLIVFLIKLFIPGAIIPGFTSIILLVLTSSMLNIISIYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH IAIRLEKILLMPSNYSPRIKKIK HHHHHHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA