| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is galE [C]
Identifier: 123965997
GI number: 123965997
Start: 692699
End: 693562
Strand: Direct
Name: galE [C]
Synonym: P9515_07621
Alternate gene names: 123965997
Gene position: 692699-693562 (Clockwise)
Preceding gene: 123965996
Following gene: 123965998
Centisome position: 40.65
GC content: 27.89
Gene sequence:
>864_bases ATGAAATTATTTATAACTGGTGCGAATGGGACTATTGGCTCTGAATTATGCAAAATTTGTTATTCAAATAAAATTTTCAA TAAAATATTTCTTAGAAAAAATAGTATATGTAATCATAAACTGTATAAAGAAAAGTTAGTTCTTGATGATATATCTGAGG TTAATTTTGAAGAATTAAGAGGAACTGATGTTTTTGTCCATCTTGCTTCAGCTGGAGTTGATCAGACTAAAGAAGCTGAT CCTAATGAAATTTTTGATTTTAATGTTTTAAAGTCATTAGAATTACTTTTAAAAGCAATAAAGGCAGGGGTAAAAAAATT CATCATAGTAGGTAGTTTTTTTGAATACGGGAAAACAGCTAATTTAACAAATAAAGATATTTCAGTTACAGATCCATTAA TACCAACGAGTATTTATGGGGCAAGCAAAGCTGCATTTACTAGTGCCTGTATTGGGCTAGCGTATTCATATGGTGTATCC GTTTATATTCTTAGACCGTTTTATGTATATGGCGAAAACGAATCTAAAAACAGACTATATAAAAGCTTATTAAGTAAAAT AAAAAGTGGAGAAGATTTTCATTTAACTGAAGGCTCTCAAATTAGAGATTTTTCAAGTAGTGAAGAAATGGCAACTTTGA TTTTTGAAGAGATATTTAAAATTTACAAAGAAAATGAAAAGAAACTTAAAATAAAAAATCTAGGTAGCGGAAGATCAATG TCAATTTATGAATTCGCTAAAAAAATTTGGATAGAAAATAAAGCAAAAGGAAAACTAATAAAAGGTTCTTTGCCCTATAG AAATAATGAATCAATGCGAAGTGTGCCTAATCTTGAACTAATTTTTGAAGATGATATTAAATAA
Upstream 100 bases:
>100_bases AATGCTTGAATAATATAAATTCTTTTCAAACTGAAAATTAATTTATTAAAGTCTTTAATTTTTATAAATTAGAATTATAG ATAAATTAATAATTTATCCT
Downstream 100 bases:
>100_bases TATTTATTATTTTGAAATAATTAAATTTCATTTTTCTAAAGTTTTGAAAACAAGATTTTTCAGAATTTACTCTACTAAGT TAGAAATTTAGACAAAATTA
Product: nucleoside-diphosphate-sugar epimerase
Products: UDPglucoseal [C]
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; UDP-Glucose 4-Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleotide Sugar Epimerase/Dehydratase; CDP-Abequose Synthase; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerase Family Protein
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKLFITGANGTIGSELCKICYSNKIFNKIFLRKNSICNHKLYKEKLVLDDISEVNFEELRGTDVFVHLASAGVDQTKEAD PNEIFDFNVLKSLELLLKAIKAGVKKFIIVGSFFEYGKTANLTNKDISVTDPLIPTSIYGASKAAFTSACIGLAYSYGVS VYILRPFYVYGENESKNRLYKSLLSKIKSGEDFHLTEGSQIRDFSSSEEMATLIFEEIFKIYKENEKKLKIKNLGSGRSM SIYEFAKKIWIENKAKGKLIKGSLPYRNNESMRSVPNLELIFEDDIK
Sequences:
>Translated_287_residues MKLFITGANGTIGSELCKICYSNKIFNKIFLRKNSICNHKLYKEKLVLDDISEVNFEELRGTDVFVHLASAGVDQTKEAD PNEIFDFNVLKSLELLLKAIKAGVKKFIIVGSFFEYGKTANLTNKDISVTDPLIPTSIYGASKAAFTSACIGLAYSYGVS VYILRPFYVYGENESKNRLYKSLLSKIKSGEDFHLTEGSQIRDFSSSEEMATLIFEEIFKIYKENEKKLKIKNLGSGRSM SIYEFAKKIWIENKAKGKLIKGSLPYRNNESMRSVPNLELIFEDDIK >Mature_287_residues MKLFITGANGTIGSELCKICYSNKIFNKIFLRKNSICNHKLYKEKLVLDDISEVNFEELRGTDVFVHLASAGVDQTKEAD PNEIFDFNVLKSLELLLKAIKAGVKKFIIVGSFFEYGKTANLTNKDISVTDPLIPTSIYGASKAAFTSACIGLAYSYGVS VYILRPFYVYGENESKNRLYKSLLSKIKSGEDFHLTEGSQIRDFSSSEEMATLIFEEIFKIYKENEKKLKIKNLGSGRSM SIYEFAKKIWIENKAKGKLIKGSLPYRNNESMRSVPNLELIFEDDIK
Specific function: Galactose metabolism; third step. [C]
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.1.3.2 [C]
Molecular weight: Translated: 32486; Mature: 32486
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFITGANGTIGSELCKICYSNKIFNKIFLRKNSICNHKLYKEKLVLDDISEVNFEELR CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHC GTDVFVHLASAGVDQTKEADPNEIFDFNVLKSLELLLKAIKAGVKKFIIVGSFFEYGKTA CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHCCCCC NLTNKDISVTDPLIPTSIYGASKAAFTSACIGLAYSYGVSVYILRPFYVYGENESKNRLY CCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHHH KSLLSKIKSGEDFHLTEGSQIRDFSSSEEMATLIFEEIFKIYKENEKKLKIKNLGSGRSM HHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC SIYEFAKKIWIENKAKGKLIKGSLPYRNNESMRSVPNLELIFEDDIK HHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHCCCCEEEEEECCCC >Mature Secondary Structure MKLFITGANGTIGSELCKICYSNKIFNKIFLRKNSICNHKLYKEKLVLDDISEVNFEELR CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHC GTDVFVHLASAGVDQTKEADPNEIFDFNVLKSLELLLKAIKAGVKKFIIVGSFFEYGKTA CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHCCCCC NLTNKDISVTDPLIPTSIYGASKAAFTSACIGLAYSYGVSVYILRPFYVYGENESKNRLY CCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHHH KSLLSKIKSGEDFHLTEGSQIRDFSSSEEMATLIFEEIFKIYKENEKKLKIKNLGSGRSM HHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC SIYEFAKKIWIENKAKGKLIKGSLPYRNNESMRSVPNLELIFEDDIK HHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD+ [C]
Metal ions: NA
Kcat value (1/min): 57600 [C]
Specific activity: 233.3
Km value (mM): 0.256 {UDPgalactose}} 0.225 {UDPgalactose}} 0.2 {UDPgalactose}} 0.18 {UDPgalactose}} 0.16 {UDPgalactose}} 0.14 {UDPgalactose}} 0.048 {UDPgalactose}} 0.026 {UDPgalactose}} [C]
Substrates: UDPglucose [C]
Specific reaction: UDPglucose <==> UDPglucoseal [C]
General reaction: Epimerization (specificity for carbon forming a hexosulose) [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA