| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is purK [H]
Identifier: 123965991
GI number: 123965991
Start: 685655
End: 686845
Strand: Direct
Name: purK [H]
Synonym: P9515_07561
Alternate gene names: 123965991
Gene position: 685655-686845 (Clockwise)
Preceding gene: 123965989
Following gene: 123965994
Centisome position: 40.23
GC content: 30.73
Gene sequence:
>1191_bases ATGACTCAAAAAAGAAATATAAAAAATATTAGTAAAAATTATTCACTAGGAATAATTGGAGGAGGTCAATTAGCCTTAAT GCTTACTGAAGCGGCAAACAAAAGAGGAATAAAAGTATGCGTTCAAACTAAATCTTCCAATGACCCAGCAGGCTCAAAAG CAGATTGTGTTATTGAGGCTGATCCTCTTAAGATAAAAGGAAATAAGGATCTAATTAAAAAGTGCGAAAAAATTATTTTT GAAAATGAATGGATTAGAATCGAAAAATTAAATTTAATTGAATCTAATAATATTTTTGTACCAAGCCTGCAATCGATTCA ACCTTTGGTAGATAGAATTTCTCAAAAAAAATTAATAGAGAAAATGGGCCTGCCCTCACCAAGATGGATTTCAATAAAGG ATTTTAAAATTCTTGAGCATAAAGAAATTGAGGATTGGAATTTTCCCTTAATGGTTAAATCTCTTAAAGGAGGATATGAC GGTAAAGGAAATAAAAAAATTAATAACAAAGAAGATTTGAATTCCTTTTTGGTTGGAGCGGAATCAGACGATTGGCTAAT TGAAGAATGGATTGACTATAAAAAGGAGCTTGCTCTGGTTGGATCAAGAGATTTTGATGGCAAAATAAGGCTATTTCCCA TTGTTGAGACATTTCAAAAAAATAACGTTTGTGATTGGGTTTTGTCTCCAGCTGAAATTAATTATGACTTGAAAACTTTT GTGATTAATATTTTTTCCTCAATAGTAAATGAACTCAATTATGTTGGAGTAATGGGAATTGAATTCTTTTATGGTGATAA AGGACTATTAATTAATGAAATTGCCCCTAGAACTCATAATTCTGCTCACTTTTCTATAGAGGCTTGTACTTCAAGCCAGT TCGATCAATATATTTGTATATCTTCAGGTGCCAAGCCCCCAGATATTAATTTGAATTCTCATGGCTCCTTAATGATAAAT TTATTAGGTTTGAAAAAAGATTTCCCTTTGTCAATAGAAAAAAGGATAGAGTTTTTAACACAAATTAAGGGGTCTAACCT TCATTGGTATGGAAAATCTAAAGAAAGTGTTGGACGGAAAATGGGTCATATAACTTTTTTACTGAATGAGAATAATTATT TGAAAAGGAATGAAAAATCAAGAGAAATATTAAATAAGGTAAGAGAGATTTGGCCATCTCCAAATGAATAA
Upstream 100 bases:
>100_bases ATATTAAAATTTTATTTTTTTATTCTAACCTCATGGTGACTTAAAAATTAGATTAAAATAATCTGTTGTTAAGAATTAAA AATCATAATAAGATCATCAT
Downstream 100 bases:
>100_bases AAAAATAAGTTAATATTTAAGTACTGGATCTTTGGTTAAGTTCTTCTTTATGTGCTCTGATCTGACTCTTTTTCGACTTG AGGAGACTGTCGTGATGTAG
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTQKRNIKNISKNYSLGIIGGGQLALMLTEAANKRGIKVCVQTKSSNDPAGSKADCVIEADPLKIKGNKDLIKKCEKIIF ENEWIRIEKLNLIESNNIFVPSLQSIQPLVDRISQKKLIEKMGLPSPRWISIKDFKILEHKEIEDWNFPLMVKSLKGGYD GKGNKKINNKEDLNSFLVGAESDDWLIEEWIDYKKELALVGSRDFDGKIRLFPIVETFQKNNVCDWVLSPAEINYDLKTF VINIFSSIVNELNYVGVMGIEFFYGDKGLLINEIAPRTHNSAHFSIEACTSSQFDQYICISSGAKPPDINLNSHGSLMIN LLGLKKDFPLSIEKRIEFLTQIKGSNLHWYGKSKESVGRKMGHITFLLNENNYLKRNEKSREILNKVREIWPSPNE
Sequences:
>Translated_396_residues MTQKRNIKNISKNYSLGIIGGGQLALMLTEAANKRGIKVCVQTKSSNDPAGSKADCVIEADPLKIKGNKDLIKKCEKIIF ENEWIRIEKLNLIESNNIFVPSLQSIQPLVDRISQKKLIEKMGLPSPRWISIKDFKILEHKEIEDWNFPLMVKSLKGGYD GKGNKKINNKEDLNSFLVGAESDDWLIEEWIDYKKELALVGSRDFDGKIRLFPIVETFQKNNVCDWVLSPAEINYDLKTF VINIFSSIVNELNYVGVMGIEFFYGDKGLLINEIAPRTHNSAHFSIEACTSSQFDQYICISSGAKPPDINLNSHGSLMIN LLGLKKDFPLSIEKRIEFLTQIKGSNLHWYGKSKESVGRKMGHITFLLNENNYLKRNEKSREILNKVREIWPSPNE >Mature_395_residues TQKRNIKNISKNYSLGIIGGGQLALMLTEAANKRGIKVCVQTKSSNDPAGSKADCVIEADPLKIKGNKDLIKKCEKIIFE NEWIRIEKLNLIESNNIFVPSLQSIQPLVDRISQKKLIEKMGLPSPRWISIKDFKILEHKEIEDWNFPLMVKSLKGGYDG KGNKKINNKEDLNSFLVGAESDDWLIEEWIDYKKELALVGSRDFDGKIRLFPIVETFQKNNVCDWVLSPAEINYDLKTFV INIFSSIVNELNYVGVMGIEFFYGDKGLLINEIAPRTHNSAHFSIEACTSSQFDQYICISSGAKPPDINLNSHGSLMINL LGLKKDFPLSIEKRIEFLTQIKGSNLHWYGKSKESVGRKMGHITFLLNENNYLKRNEKSREILNKVREIWPSPNE
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=362, Percent_Identity=28.4530386740331, Blast_Score=129, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324702, Length=371, Percent_Identity=30.4582210242588, Blast_Score=160, Evalue=5e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 45128; Mature: 44996
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKRNIKNISKNYSLGIIGGGQLALMLTEAANKRGIKVCVQTKSSNDPAGSKADCVIEA CCCCCCCHHHCCCCEEEEEECCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEC DPLKIKGNKDLIKKCEKIIFENEWIRIEKLNLIESNNIFVPSLQSIQPLVDRISQKKLIE CCEEEECCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHH KMGLPSPRWISIKDFKILEHKEIEDWNFPLMVKSLKGGYDGKGNKKINNKEDLNSFLVGA HHCCCCCCEEEEECEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHEECC ESDDWLIEEWIDYKKELALVGSRDFDGKIRLFPIVETFQKNNVCDWVLSPAEINYDLKTF CCCCHHHHHHHHHHHHEEEECCCCCCCCEEEEEEHHHHCCCCCEEEEECCHHCCCHHHHH VINIFSSIVNELNYVGVMGIEFFYGDKGLLINEIAPRTHNSAHFSIEACTSSQFDQYICI HHHHHHHHHHHHCCEEEEEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEE SSGAKPPDINLNSHGSLMINLLGLKKDFPLSIEKRIEFLTQIKGSNLHWYGKSKESVGRK ECCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHH MGHITFLLNENNYLKRNEKSREILNKVREIWPSPNE CCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TQKRNIKNISKNYSLGIIGGGQLALMLTEAANKRGIKVCVQTKSSNDPAGSKADCVIEA CCCCCCHHHCCCCEEEEEECCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEC DPLKIKGNKDLIKKCEKIIFENEWIRIEKLNLIESNNIFVPSLQSIQPLVDRISQKKLIE CCEEEECCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHH KMGLPSPRWISIKDFKILEHKEIEDWNFPLMVKSLKGGYDGKGNKKINNKEDLNSFLVGA HHCCCCCCEEEEECEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHEECC ESDDWLIEEWIDYKKELALVGSRDFDGKIRLFPIVETFQKNNVCDWVLSPAEINYDLKTF CCCCHHHHHHHHHHHHEEEECCCCCCCCEEEEEEHHHHCCCCCEEEEECCHHCCCHHHHH VINIFSSIVNELNYVGVMGIEFFYGDKGLLINEIAPRTHNSAHFSIEACTSSQFDQYICI HHHHHHHHHHHHCCEEEEEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEE SSGAKPPDINLNSHGSLMINLLGLKKDFPLSIEKRIEFLTQIKGSNLHWYGKSKESVGRK ECCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHH MGHITFLLNENNYLKRNEKSREILNKVREIWPSPNE CCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA