| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965988
Identifier: 123965988
GI number: 123965988
Start: 682417
End: 683214
Strand: Reverse
Name: 123965988
Synonym: P9515_07531
Alternate gene names: NA
Gene position: 683214-682417 (Counterclockwise)
Preceding gene: 123965990
Following gene: 123965986
Centisome position: 40.09
GC content: 33.33
Gene sequence:
>798_bases ATGCATTCAAAGATTAACTATTTCTTAGGAATAATTCTATCTCTAATAGTTTTAATTTTTAATGAGCCTTCTTTAGCTAT TAATAATCCAAATCTTTTACCAGAAGAAAAGACTCCTGTTATCGATTTAGCCAAAACATTAAGTCCTAATCAGAAAATAT CTTTAGAAGAAAATCTTAATAACTTAGAAATCGAAAGTGGTTGGAAGATTAAATATTTATCTCAATTTGAAAGTATCCCT GGAATTGCAATAAAAGATTATTGGGATCTAGATGAAACAAGTTTATTAGTAATTGCAGATCCTAGAGGCGGGAATTTATT GAATTTTAATGTTGGGGATGCATATTTTGCTTTTATGCCAAGATTATTTTGGGTAGAACTTCAAACAAGGTTTGGGAATC AATATTATGTAAAAGATCATGGAGAAGATGGAGCTGTATTAGATGCAATTAATGCAGTAAAAATTTGTCTTAACAGAGGA GGGTGCCAAGTTGTCCCTGGATTACCAAAAGAACAATATATTTGGACTTTGTGTACTTCTATCTTAGGAGGATTAGTGGC AGGTTTTGCTGCTGCTCCAAGAAAAGAGGGGCAAATCATATCAATTGGATTTTTGGCTCTTCTTTCTCCTTTATGGGGAA TGCTATTTGGCATTTTTGGTTTGGCACCAATAATTTCAAGGACAAGCGAAATAATCCCGTTATTCAAAAATGGTCTCGCT TTTACTGCAGCAGCAATCGCAGGATACCTATTATCTCAAACTGTATTCTCTCGGTATGAGAAACCCAAAAAAGGTTAA
Upstream 100 bases:
>100_bases ATAGTTCCTCCCTTTTTTATTATTTTTTTTATTAACCACTCTGGATTATTCGCGGGTAAGCTGTTCATCGGCGAAAATAC ATAAAGACAAAAAACTTTTT
Downstream 100 bases:
>100_bases AGATTTTCTTCCTAAATTCTCCATTTCAAAAAAGAATTTCTTCTTCAAGTATCTCTCCCAACTCTGAATACCATCGGTGA GAAATATGAGTAAGTTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MHSKINYFLGIILSLIVLIFNEPSLAINNPNLLPEEKTPVIDLAKTLSPNQKISLEENLNNLEIESGWKIKYLSQFESIP GIAIKDYWDLDETSLLVIADPRGGNLLNFNVGDAYFAFMPRLFWVELQTRFGNQYYVKDHGEDGAVLDAINAVKICLNRG GCQVVPGLPKEQYIWTLCTSILGGLVAGFAAAPRKEGQIISIGFLALLSPLWGMLFGIFGLAPIISRTSEIIPLFKNGLA FTAAAIAGYLLSQTVFSRYEKPKKG
Sequences:
>Translated_265_residues MHSKINYFLGIILSLIVLIFNEPSLAINNPNLLPEEKTPVIDLAKTLSPNQKISLEENLNNLEIESGWKIKYLSQFESIP GIAIKDYWDLDETSLLVIADPRGGNLLNFNVGDAYFAFMPRLFWVELQTRFGNQYYVKDHGEDGAVLDAINAVKICLNRG GCQVVPGLPKEQYIWTLCTSILGGLVAGFAAAPRKEGQIISIGFLALLSPLWGMLFGIFGLAPIISRTSEIIPLFKNGLA FTAAAIAGYLLSQTVFSRYEKPKKG >Mature_265_residues MHSKINYFLGIILSLIVLIFNEPSLAINNPNLLPEEKTPVIDLAKTLSPNQKISLEENLNNLEIESGWKIKYLSQFESIP GIAIKDYWDLDETSLLVIADPRGGNLLNFNVGDAYFAFMPRLFWVELQTRFGNQYYVKDHGEDGAVLDAINAVKICLNRG GCQVVPGLPKEQYIWTLCTSILGGLVAGFAAAPRKEGQIISIGFLALLSPLWGMLFGIFGLAPIISRTSEIIPLFKNGLA FTAAAIAGYLLSQTVFSRYEKPKKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29254; Mature: 29254
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSKINYFLGIILSLIVLIFNEPSLAINNPNLLPEEKTPVIDLAKTLSPNQKISLEENLN CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEHHHCCC NLEIESGWKIKYLSQFESIPGIAIKDYWDLDETSLLVIADPRGGNLLNFNVGDAYFAFMP CEEECCCCCCHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHH RLFWVELQTRFGNQYYVKDHGEDGAVLDAINAVKICLNRGGCQVVPGLPKEQYIWTLCTS HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHH ILGGLVAGFAAAPRKEGQIISIGFLALLSPLWGMLFGIFGLAPIISRTSEIIPLFKNGLA HHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH FTAAAIAGYLLSQTVFSRYEKPKKG HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHSKINYFLGIILSLIVLIFNEPSLAINNPNLLPEEKTPVIDLAKTLSPNQKISLEENLN CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEHHHCCC NLEIESGWKIKYLSQFESIPGIAIKDYWDLDETSLLVIADPRGGNLLNFNVGDAYFAFMP CEEECCCCCCHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHH RLFWVELQTRFGNQYYVKDHGEDGAVLDAINAVKICLNRGGCQVVPGLPKEQYIWTLCTS HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHH ILGGLVAGFAAAPRKEGQIISIGFLALLSPLWGMLFGIFGLAPIISRTSEIIPLFKNGLA HHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH FTAAAIAGYLLSQTVFSRYEKPKKG HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA