| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is nadA [H]
Identifier: 123965986
GI number: 123965986
Start: 680540
End: 681454
Strand: Reverse
Name: nadA [H]
Synonym: P9515_07511
Alternate gene names: 123965986
Gene position: 681454-680540 (Counterclockwise)
Preceding gene: 123965988
Following gene: 123965982
Centisome position: 39.99
GC content: 31.58
Gene sequence:
>915_bases TTGATTTCTGAAATCAAGGAGCGTTGCTTAGAAACCAATGCGATAATTCTTGCTCATTATTATCAAGCGCCAGAGATACA AGATATTGCTGATTTTATTGGGGATTCTTTAGATCTATCTAGGAAAGCAGCAAATAATAATGCAGATATAATAATTTTTT GTGGTGTCCACTTTATGGCAGAAACAGCGAAAATACTTAGCCCAAATAAAACAGTATTATTACCTGATATTGATGCAGGT TGTTCTTTGGCAGATGATTGTCCTGCAGAAGAATTCCAAAAGTTTAGAGATGAGAATCCAGATCATTATGTTGTGAGTTA CATAAACTGTACTGCAGAAGTAAAAGCTCAAAGTGATTTGATATGTACTAGTAGCAATGCTGTTTCATTAGTAGAAAAGA TACCTAAAGATAAAAAGATCATATTTGCACCAGATCAGAATCTAGGTAGATGGGTTCAAAAAAATTCTGGTAGAAACCTT AAACTTTGGCCAGGTAGCTGTATAGTTCATGAAACATTTAGCGAAGAAGCTTTATTAAAATTAAGATATAAATATCCAGA AGCGAAGGTAATAGCTCATCCTGAATGTAGTCAAAATTTGTTAGTACTTTCAGATTTTATTGGTTCGACAAGTAAGTTAC TTGAATTTATTAGAGATGATCATTCTAATACTTATATGGTTTTAACTGAACCGGGGATAATTCATCAAATGAAAAAGAAA GAACCTAATAAGAAATTTATTGAAGTGCCAGATATAGATGGGTGTAAATGTAATGAATGTCCCTATATGAAATTAAATAC ACTAGATAAAATTTTAGATTGTTTGAAAAATAATTCTCCATCAATTGAATTGGAACCTGAAATAATTAAAAAAGCTTATA AGCCCATAAAGAGGATGCTAGATATGAGCAGCTAA
Upstream 100 bases:
>100_bases TTTTTCTATTTAAAGGCATATAATCTATTAAGAGACATTGTAAATCCTGACCAGTATAACTTCTACTGCAAAACAGAAAT CTATTAAAAACGAAAAAGAT
Downstream 100 bases:
>100_bases TAAAATTTATAAACCAGATTATGGTATTTCTCTCCAAAAACTTCTGATAAATTTGAAGAATTTGGTTCAAAATTTCTTAC TAAATCAGATTTTTTAATCA
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MISEIKERCLETNAIILAHYYQAPEIQDIADFIGDSLDLSRKAANNNADIIIFCGVHFMAETAKILSPNKTVLLPDIDAG CSLADDCPAEEFQKFRDENPDHYVVSYINCTAEVKAQSDLICTSSNAVSLVEKIPKDKKIIFAPDQNLGRWVQKNSGRNL KLWPGSCIVHETFSEEALLKLRYKYPEAKVIAHPECSQNLLVLSDFIGSTSKLLEFIRDDHSNTYMVLTEPGIIHQMKKK EPNKKFIEVPDIDGCKCNECPYMKLNTLDKILDCLKNNSPSIELEPEIIKKAYKPIKRMLDMSS
Sequences:
>Translated_304_residues MISEIKERCLETNAIILAHYYQAPEIQDIADFIGDSLDLSRKAANNNADIIIFCGVHFMAETAKILSPNKTVLLPDIDAG CSLADDCPAEEFQKFRDENPDHYVVSYINCTAEVKAQSDLICTSSNAVSLVEKIPKDKKIIFAPDQNLGRWVQKNSGRNL KLWPGSCIVHETFSEEALLKLRYKYPEAKVIAHPECSQNLLVLSDFIGSTSKLLEFIRDDHSNTYMVLTEPGIIHQMKKK EPNKKFIEVPDIDGCKCNECPYMKLNTLDKILDCLKNNSPSIELEPEIIKKAYKPIKRMLDMSS >Mature_304_residues MISEIKERCLETNAIILAHYYQAPEIQDIADFIGDSLDLSRKAANNNADIIIFCGVHFMAETAKILSPNKTVLLPDIDAG CSLADDCPAEEFQKFRDENPDHYVVSYINCTAEVKAQSDLICTSSNAVSLVEKIPKDKKIIFAPDQNLGRWVQKNSGRNL KLWPGSCIVHETFSEEALLKLRYKYPEAKVIAHPECSQNLLVLSDFIGSTSKLLEFIRDDHSNTYMVLTEPGIIHQMKKK EPNKKFIEVPDIDGCKCNECPYMKLNTLDKILDCLKNNSPSIELEPEIIKKAYKPIKRMLDMSS
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=312, Percent_Identity=40.0641025641026, Blast_Score=247, Evalue=8e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 - InterPro: IPR023066 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 34359; Mature: 34359
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISEIKERCLETNAIILAHYYQAPEIQDIADFIGDSLDLSRKAANNNADIIIFCGVHFMA CCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHCCCCCCCEEEEECHHHHH ETAKILSPNKTVLLPDIDAGCSLADDCPAEEFQKFRDENPDHYVVSYINCTAEVKAQSDL HHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECEEEECCCCCE ICTSSNAVSLVEKIPKDKKIIFAPDQNLGRWVQKNSGRNLKLWPGSCIVHETFSEEALLK EEECCCHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCEEEECCCCEEEECCCCHHHEEE LRYKYPEAKVIAHPECSQNLLVLSDFIGSTSKLLEFIRDDHSNTYMVLTEPGIIHQMKKK EEECCCCCEEEECCCCCCCEEEEHHHHCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHC EPNKKFIEVPDIDGCKCNECPYMKLNTLDKILDCLKNNSPSIELEPEIIKKAYKPIKRML CCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHH DMSS CCCC >Mature Secondary Structure MISEIKERCLETNAIILAHYYQAPEIQDIADFIGDSLDLSRKAANNNADIIIFCGVHFMA CCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHCCCCCCCEEEEECHHHHH ETAKILSPNKTVLLPDIDAGCSLADDCPAEEFQKFRDENPDHYVVSYINCTAEVKAQSDL HHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECEEEECCCCCE ICTSSNAVSLVEKIPKDKKIIFAPDQNLGRWVQKNSGRNLKLWPGSCIVHETFSEEALLK EEECCCHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCEEEECCCCEEEECCCCHHHEEE LRYKYPEAKVIAHPECSQNLLVLSDFIGSTSKLLEFIRDDHSNTYMVLTEPGIIHQMKKK EEECCCCCEEEECCCCCCCEEEEHHHHCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHC EPNKKFIEVPDIDGCKCNECPYMKLNTLDKILDCLKNNSPSIELEPEIIKKAYKPIKRML CCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHH DMSS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA