| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is hslO
Identifier: 123965973
GI number: 123965973
Start: 668520
End: 669422
Strand: Reverse
Name: hslO
Synonym: P9515_07381
Alternate gene names: 123965973
Gene position: 669422-668520 (Counterclockwise)
Preceding gene: 123965974
Following gene: 123965969
Centisome position: 39.28
GC content: 32.45
Gene sequence:
>903_bases ATGGGGGATAAAATTGTAAGAGCAACTGCCGCTAATGGAGGAATAAGATTAGTTGCAGTATTAACAACTAATGCTACCAG GGAAGCGAAAAAGAGGCATGGGCTATCCTATCTAACCTCTTCCATACTTGGCAGAGCTTTCAGCGCCTCTCTTCTGTTAG CAAGTTCAATGAAAATAATGCATGGTCGAGTCACCTTAAGAGTAAGATCTGATGGGCCCTTAAAGGGATTACTAGTTGAT GCAGGGAGAGATGGCAAAGTCAGAGGGTATGTAGGTAATCCTAATTTGGAATTAGATTTAGTTAAAACAAAATCAAATAA ATATTCTTTTGATTTTACAAAAGCACTTGGTACAGGATATTTAAATATTATTCGAGACAATGGTTTTGGTGAACCTTTTA CAAGCACTGTTGAGTTAGTGAATGGGAACATTGCAGAAGATTTAGCATCTTACTTATATCATTCTGAACAGACTCCCTCA GCTGTATTTATTGGGGAAAAGATTCAAAATAAGAATCTTATTTGTAGCGGAGGATTATTAGCACAAGTTTTGCCTAAAAA AGAAACTGATCCTTTATTAGTTTCATTGTTAGAAGATAGATGTAAAGAAATAAATTCTTTCAGCGAAGATTTATTTGAAT CAAAAGATGATCTACTTTCAATAATAAAAAATATATTTCCAGATATTGACGATAAATCAATTTCTGAGAATGCTAGAACT CAAGAAGTTAGATTTGAATGTAGGTGCTCTAAACAAAGAAGTTTAAATGCAATGAAAATGCTTGATAAAGACGAATTAGA AGACATTTTAAAAAAAGAAGGAAAAGCCGAATTAGTTTGCGAATTTTGTAAGAATAAATATTTAATAAATTTTGAAGAGA TTGAAGAAATGATTAAAGCTTAA
Upstream 100 bases:
>100_bases ATAATAATTGTTACTCATGAACCCTCTTTATTTGAGGGAATACCATATAAAATAATAACCCTTGAGAAAGGAAAGATTAA GAAATTAATGAAAGAACATT
Downstream 100 bases:
>100_bases TTTATAGGAAAATTACTCCTATCCACAAAATTATCATTGCTGGTAAACTTTGAATTTTTTGAATTGATAGAGAGTTATTG GATATTTCCTGAATAAATGA
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MGDKIVRATAANGGIRLVAVLTTNATREAKKRHGLSYLTSSILGRAFSASLLLASSMKIMHGRVTLRVRSDGPLKGLLVD AGRDGKVRGYVGNPNLELDLVKTKSNKYSFDFTKALGTGYLNIIRDNGFGEPFTSTVELVNGNIAEDLASYLYHSEQTPS AVFIGEKIQNKNLICSGGLLAQVLPKKETDPLLVSLLEDRCKEINSFSEDLFESKDDLLSIIKNIFPDIDDKSISENART QEVRFECRCSKQRSLNAMKMLDKDELEDILKKEGKAELVCEFCKNKYLINFEEIEEMIKA
Sequences:
>Translated_300_residues MGDKIVRATAANGGIRLVAVLTTNATREAKKRHGLSYLTSSILGRAFSASLLLASSMKIMHGRVTLRVRSDGPLKGLLVD AGRDGKVRGYVGNPNLELDLVKTKSNKYSFDFTKALGTGYLNIIRDNGFGEPFTSTVELVNGNIAEDLASYLYHSEQTPS AVFIGEKIQNKNLICSGGLLAQVLPKKETDPLLVSLLEDRCKEINSFSEDLFESKDDLLSIIKNIFPDIDDKSISENART QEVRFECRCSKQRSLNAMKMLDKDELEDILKKEGKAELVCEFCKNKYLINFEEIEEMIKA >Mature_299_residues GDKIVRATAANGGIRLVAVLTTNATREAKKRHGLSYLTSSILGRAFSASLLLASSMKIMHGRVTLRVRSDGPLKGLLVDA GRDGKVRGYVGNPNLELDLVKTKSNKYSFDFTKALGTGYLNIIRDNGFGEPFTSTVELVNGNIAEDLASYLYHSEQTPSA VFIGEKIQNKNLICSGGLLAQVLPKKETDPLLVSLLEDRCKEINSFSEDLFESKDDLLSIIKNIFPDIDDKSISENARTQ EVRFECRCSKQRSLNAMKMLDKDELEDILKKEGKAELVCEFCKNKYLINFEEIEEMIKA
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family
Homologues:
Organism=Escherichia coli, GI87082260, Length=300, Percent_Identity=24.6666666666667, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLO_PROM5 (A2BVY6)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001011054.1 - ProteinModelPortal: A2BVY6 - SMR: A2BVY6 - STRING: A2BVY6 - GeneID: 4719490 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_07381 - eggNOG: COG1281 - HOGENOM: HBG286231 - OMA: AYYFTVS - ProtClustDB: PRK00114 - BioCyc: PMAR167542:P9515ORF_0776-MONOMER - GO: GO:0005737 - HAMAP: MF_00117 - InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - Gene3D: G3DSA:3.90.1280.10 - Gene3D: G3DSA:3.55.30.10 - PIRSF: PIRSF005261
Pfam domain/function: PF01430 HSP33; SSF64397 Heat_shock_Hsp33_N
EC number: NA
Molecular weight: Translated: 33340; Mature: 33209
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDKIVRATAANGGIRLVAVLTTNATREAKKRHGLSYLTSSILGRAFSASLLLASSMKIM CCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEE HGRVTLRVRSDGPLKGLLVDAGRDGKVRGYVGNPNLELDLVKTKSNKYSFDFTKALGTGY ECEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCEEHHHHHCCCE LNIIRDNGFGEPFTSTVELVNGNIAEDLASYLYHSEQTPSAVFIGEKIQNKNLICSGGLL EEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCHHCCCCEEECCCHH AQVLPKKETDPLLVSLLEDRCKEINSFSEDLFESKDDLLSIIKNIFPDIDDKSISENART HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHH QEVRFECRCSKQRSLNAMKMLDKDELEDILKKEGKAELVCEFCKNKYLINFEEIEEMIKA HHHHHHEECCHHHCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCEEECHHHHHHHHCC >Mature Secondary Structure GDKIVRATAANGGIRLVAVLTTNATREAKKRHGLSYLTSSILGRAFSASLLLASSMKIM CCCEEEEEECCCCEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEE HGRVTLRVRSDGPLKGLLVDAGRDGKVRGYVGNPNLELDLVKTKSNKYSFDFTKALGTGY ECEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCEEHHHHHCCCE LNIIRDNGFGEPFTSTVELVNGNIAEDLASYLYHSEQTPSAVFIGEKIQNKNLICSGGLL EEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCHHCCCCEEECCCHH AQVLPKKETDPLLVSLLEDRCKEINSFSEDLFESKDDLLSIIKNIFPDIDDKSISENART HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHH QEVRFECRCSKQRSLNAMKMLDKDELEDILKKEGKAELVCEFCKNKYLINFEEIEEMIKA HHHHHHEECCHHHCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA