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The map label for this gene is nrdJ [H]

Identifier: 123965969

GI number: 123965969

Start: 662963

End: 665296

Strand: Reverse

Name: nrdJ [H]

Synonym: P9515_07341

Alternate gene names: 123965969

Gene position: 665296-662963 (Counterclockwise)

Preceding gene: 123965973

Following gene: 123965968

Centisome position: 39.04

GC content: 36.03

Gene sequence:

>2334_bases
GTGACAATTGCACCAAATAAAGCTTCCTCCGAGAGCAATTCTAATAATCTTAGAAAAGATGATTTCCCAAAAACAGCTCC
AGCAGCTTACCCTGTTTTTTTCAGGTCATATAGTAGAAAGACAGTTTCTGGAAAAAGAGAGAATTGGAGTGAAGTTGGGA
AAAGAAACTTATCTGGATTAAAAGAATTAGGAAAACTCTCTGATCAAGAAATGATGTTAATGAGAGAAATGCAGAGTAAC
CAAAAAGCACAACCATCAGGAAGATGGTTATGGATTGGAGGTACTCCATGGATTAATAAAAATCAGAATTTTTCAGGAGC
GTATAATTGTACTTCGACAAATTTAATTGATTGGGAAGCTTTTGCCTTAATGATGGATTTAGCTATGATGGGTTGCGGCA
CAGGAGCAATAATAGAACCCCATTTCATAAATAAGCTTCCAACAGTAAAAAATAAAATAACTATAAAATCAGTTAGCGAA
GTAGGAATAACTCCAAAAGACCAAAGGCAGGAAAAATCCTCTTTAGAAATTAAAGGCAAGGATATTTTTATAAAAGTCGG
GGATAGCAGAAGAGGCTGGGTAGATAGCTATAAATATCTTCTTGAAGCCTCAAGCAATGAAAGTCTTGAAAAAGAAATTG
ACGTTCATATTAACTTAGAAGATATTAGGCCAGCAGGAGAATCACTAAAAGGTTTTGGTGGCATGGCAAATCCTATCAAA
TTAAAGGATCTTTACTCAAGAGTTGCTTCTCTTTTAGGAAAAGCTATTGGTAGAAAACTCAATACAGTGGAGTGTTGTTT
ACTTATTGATGAGGCAGCTGTGACTATTGTTGCAGGTAATATAAGAAGAAGCGCTGGCATGAGACAGTTTTCATCTGATG
ATAAGGAAGCAGCAAGCGCGAAAGAGAATTTATGGAGTCAAGACCAGGATGGTAATTGGAGAATTGATCCCGAAAAGGAC
GCTCTTAGAATGGCAAATCATACAAGGGTTTATCATACTAAGCCCTCTTATCAAACAATTCTGGATGCTGTAACCAAGCA
ATTCCATTCAGGTGAAGGAGCAATTCAATTTGCACCAGAGGCAATAGCAAGATCAAATGCAGATATTTTGAACGAAAAAG
ATCTTAAAAACGAATTCATAGAAATATATTCTGAACAGGGTAAAGATGAAGCCAGAAATTGGATTAATCTTAATTATGGT
CCATTCTCTGAAGAAGAATTAAACCATAGGATGAGTAGATATGGACTTAATCCTTGCGGAGAAATATTAGGTAATGATTT
TCATTGCAATTTAGCCGAAGTTCATCTAAATCAGATTGACCCGAAAAATATTCAAGAGCAAAAAAAAGCCTTTAAAGCTG
CAGCGCTTTCAGTGGCATGCTTGCTAAATCATGAATTTGAAGTTGAGAGATATAGAAAAAGCAGGGAGTATGACCCTATT
GTTGGAGTTAGTTTTACAGGATTATTTGATTTCTGTGTACATGCCTTTGGAACCCCATGGTTGAAATGGTGGGAAGCGGG
AAGACCTGATAATCAAGAAGGTAGGGATTTTAAAAAGCAAGAAGCTAAATTTTTAGACTCTTGGAGAAATATTGTTAAAG
AAACTGTATGGGAATACTGCGACAAACATAATCTAAGAAGACCAAATAGATGTACGACAGTTCAACCTGCCGGAACTAAA
AGTCTTTTAACAGGAGCTGCTCCTGGATGGCATCCCCCAAAAGCACAAAGATTTTTAAGAAGAATAACTTTCAGAAAGAA
TGATCCTATTGCCTTAGCTTGTATGGATTATGGTTACTCTGTTGTCCCATCTCAATCTGACAAAGATGAAAAAGGCTGCT
TACTTGATAACCCATTTGATCCAAGATGTACTGAATGGCTAGTTGAAATACCAACAGAAGTAAGCTGGGCAAATATAGAG
GGAGCAGATAAAATAGATATAAATAATTTCTCTGCTCTTGCACAATTTGATTTTTATATGCAAGTTCAGAAGTATTATAC
AGAGCATAATACTTCTGCAACTGTTGAATTCAGAGAAAATGAAATTGAAGATCTAGCAAAAGCAATACATAACGCAATAG
AACACAACGAAGGATATATATCAGCAGCATTATTAGCTAGATTCAGTGCAAATGCCACATTCCCAAGATTACCTTTTGAA
CCCATAAGTAAAGAGGAATATTTATCTTTGCAGAAAAAAGTTACTGAAAGGAAAGTAAATAACGATTTCTTTGATGCACT
TAATAAATATGATATTGGAGAGCTCTCCGAAGCAGGACCAGCTGGGTGTGATTCGGATAAATGCCTCCTTCCGTTAGCTA
ATCCAAAGAATTAA

Upstream 100 bases:

>100_bases
TATTTTTACACAAACCATTAAATAGTGGTAAGAATAGTTGCAGGCACCATAGGTAGAGTTATTCTTCCTATACGGGTAAA
TTTACATACTTTTTTTCATC

Downstream 100 bases:

>100_bases
ATATTAAATTATTTATTAATAAAGACGATATTTGTTTTTTAATAATCAATCCATAGCTACATCTTAAGTAAGTAAATAAA
TCGATTATGACATTAAGCAT

Product: ribonucleotide reductase (class II)

Products: NA

Alternate protein names: RTPR [H]

Number of amino acids: Translated: 777; Mature: 776

Protein sequence:

>777_residues
MTIAPNKASSESNSNNLRKDDFPKTAPAAYPVFFRSYSRKTVSGKRENWSEVGKRNLSGLKELGKLSDQEMMLMREMQSN
QKAQPSGRWLWIGGTPWINKNQNFSGAYNCTSTNLIDWEAFALMMDLAMMGCGTGAIIEPHFINKLPTVKNKITIKSVSE
VGITPKDQRQEKSSLEIKGKDIFIKVGDSRRGWVDSYKYLLEASSNESLEKEIDVHINLEDIRPAGESLKGFGGMANPIK
LKDLYSRVASLLGKAIGRKLNTVECCLLIDEAAVTIVAGNIRRSAGMRQFSSDDKEAASAKENLWSQDQDGNWRIDPEKD
ALRMANHTRVYHTKPSYQTILDAVTKQFHSGEGAIQFAPEAIARSNADILNEKDLKNEFIEIYSEQGKDEARNWINLNYG
PFSEEELNHRMSRYGLNPCGEILGNDFHCNLAEVHLNQIDPKNIQEQKKAFKAAALSVACLLNHEFEVERYRKSREYDPI
VGVSFTGLFDFCVHAFGTPWLKWWEAGRPDNQEGRDFKKQEAKFLDSWRNIVKETVWEYCDKHNLRRPNRCTTVQPAGTK
SLLTGAAPGWHPPKAQRFLRRITFRKNDPIALACMDYGYSVVPSQSDKDEKGCLLDNPFDPRCTEWLVEIPTEVSWANIE
GADKIDINNFSALAQFDFYMQVQKYYTEHNTSATVEFRENEIEDLAKAIHNAIEHNEGYISAALLARFSANATFPRLPFE
PISKEEYLSLQKKVTERKVNNDFFDALNKYDIGELSEAGPAGCDSDKCLLPLANPKN

Sequences:

>Translated_777_residues
MTIAPNKASSESNSNNLRKDDFPKTAPAAYPVFFRSYSRKTVSGKRENWSEVGKRNLSGLKELGKLSDQEMMLMREMQSN
QKAQPSGRWLWIGGTPWINKNQNFSGAYNCTSTNLIDWEAFALMMDLAMMGCGTGAIIEPHFINKLPTVKNKITIKSVSE
VGITPKDQRQEKSSLEIKGKDIFIKVGDSRRGWVDSYKYLLEASSNESLEKEIDVHINLEDIRPAGESLKGFGGMANPIK
LKDLYSRVASLLGKAIGRKLNTVECCLLIDEAAVTIVAGNIRRSAGMRQFSSDDKEAASAKENLWSQDQDGNWRIDPEKD
ALRMANHTRVYHTKPSYQTILDAVTKQFHSGEGAIQFAPEAIARSNADILNEKDLKNEFIEIYSEQGKDEARNWINLNYG
PFSEEELNHRMSRYGLNPCGEILGNDFHCNLAEVHLNQIDPKNIQEQKKAFKAAALSVACLLNHEFEVERYRKSREYDPI
VGVSFTGLFDFCVHAFGTPWLKWWEAGRPDNQEGRDFKKQEAKFLDSWRNIVKETVWEYCDKHNLRRPNRCTTVQPAGTK
SLLTGAAPGWHPPKAQRFLRRITFRKNDPIALACMDYGYSVVPSQSDKDEKGCLLDNPFDPRCTEWLVEIPTEVSWANIE
GADKIDINNFSALAQFDFYMQVQKYYTEHNTSATVEFRENEIEDLAKAIHNAIEHNEGYISAALLARFSANATFPRLPFE
PISKEEYLSLQKKVTERKVNNDFFDALNKYDIGELSEAGPAGCDSDKCLLPLANPKN
>Mature_776_residues
TIAPNKASSESNSNNLRKDDFPKTAPAAYPVFFRSYSRKTVSGKRENWSEVGKRNLSGLKELGKLSDQEMMLMREMQSNQ
KAQPSGRWLWIGGTPWINKNQNFSGAYNCTSTNLIDWEAFALMMDLAMMGCGTGAIIEPHFINKLPTVKNKITIKSVSEV
GITPKDQRQEKSSLEIKGKDIFIKVGDSRRGWVDSYKYLLEASSNESLEKEIDVHINLEDIRPAGESLKGFGGMANPIKL
KDLYSRVASLLGKAIGRKLNTVECCLLIDEAAVTIVAGNIRRSAGMRQFSSDDKEAASAKENLWSQDQDGNWRIDPEKDA
LRMANHTRVYHTKPSYQTILDAVTKQFHSGEGAIQFAPEAIARSNADILNEKDLKNEFIEIYSEQGKDEARNWINLNYGP
FSEEELNHRMSRYGLNPCGEILGNDFHCNLAEVHLNQIDPKNIQEQKKAFKAAALSVACLLNHEFEVERYRKSREYDPIV
GVSFTGLFDFCVHAFGTPWLKWWEAGRPDNQEGRDFKKQEAKFLDSWRNIVKETVWEYCDKHNLRRPNRCTTVQPAGTKS
LLTGAAPGWHPPKAQRFLRRITFRKNDPIALACMDYGYSVVPSQSDKDEKGCLLDNPFDPRCTEWLVEIPTEVSWANIEG
ADKIDINNFSALAQFDFYMQVQKYYTEHNTSATVEFRENEIEDLAKAIHNAIEHNEGYISAALLARFSANATFPRLPFEP
ISKEEYLSLQKKVTERKVNNDFFDALNKYDIGELSEAGPAGCDSDKCLLPLANPKN

Specific function: Unknown

COG id: COG1372

COG function: function code L; Intein/homing endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class II ribonucleoside-triphosphate reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000788
- InterPro:   IPR013345 [H]

Pfam domain/function: PF02867 Ribonuc_red_lgC [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 88023; Mature: 87892

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAPNKASSESNSNNLRKDDFPKTAPAAYPVFFRSYSRKTVSGKRENWSEVGKRNLSGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHH
KELGKLSDQEMMLMREMQSNQKAQPSGRWLWIGGTPWINKNQNFSGAYNCTSTNLIDWEA
HHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
FALMMDLAMMGCGTGAIIEPHFINKLPTVKNKITIKSVSEVGITPKDQRQEKSSLEIKGK
HHHHHHHHHHCCCCCCEECCHHHCCCCCCCCEEEEEEHHHCCCCCCHHHHHHCCCEEECC
DIFIKVGDSRRGWVDSYKYLLEASSNESLEKEIDVHINLEDIRPAGESLKGFGGMANPIK
EEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCCHHHHHCCCCCCCEE
LKDLYSRVASLLGKAIGRKLNTVECCLLIDEAAVTIVAGNIRRSAGMRQFSSDDKEAASA
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCHHHHHCCHHHCCCHHHHHHH
KENLWSQDQDGNWRIDPEKDALRMANHTRVYHTKPSYQTILDAVTKQFHSGEGAIQFAPE
HHHHCCCCCCCCEEECCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEECHH
AIARSNADILNEKDLKNEFIEIYSEQGKDEARNWINLNYGPFSEEELNHRMSRYGLNPCG
HHHCCCCHHCCHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCHHHHHHHHHHCCCCHHH
EILGNDFHCNLAEVHLNQIDPKNIQEQKKAFKAAALSVACLLNHEFEVERYRKSREYDPI
HHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCE
VGVSFTGLFDFCVHAFGTPWLKWWEAGRPDNQEGRDFKKQEAKFLDSWRNIVKETVWEYC
ECEEHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DKHNLRRPNRCTTVQPAGTKSLLTGAAPGWHPPKAQRFLRRITFRKNDPIALACMDYGYS
HHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCE
VVPSQSDKDEKGCLLDNPFDPRCTEWLVEIPTEVSWANIEGADKIDINNFSALAQFDFYM
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCEECCCCHHHHHHHHHHH
QVQKYYTEHNTSATVEFRENEIEDLAKAIHNAIEHNEGYISAALLARFSANATFPRLPFE
HHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
PISKEEYLSLQKKVTERKVNNDFFDALNKYDIGELSEAGPAGCDSDKCLLPLANPKN
CCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
TIAPNKASSESNSNNLRKDDFPKTAPAAYPVFFRSYSRKTVSGKRENWSEVGKRNLSGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHH
KELGKLSDQEMMLMREMQSNQKAQPSGRWLWIGGTPWINKNQNFSGAYNCTSTNLIDWEA
HHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
FALMMDLAMMGCGTGAIIEPHFINKLPTVKNKITIKSVSEVGITPKDQRQEKSSLEIKGK
HHHHHHHHHHCCCCCCEECCHHHCCCCCCCCEEEEEEHHHCCCCCCHHHHHHCCCEEECC
DIFIKVGDSRRGWVDSYKYLLEASSNESLEKEIDVHINLEDIRPAGESLKGFGGMANPIK
EEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCCHHHHHCCCCCCCEE
LKDLYSRVASLLGKAIGRKLNTVECCLLIDEAAVTIVAGNIRRSAGMRQFSSDDKEAASA
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCHHHHHCCHHHCCCHHHHHHH
KENLWSQDQDGNWRIDPEKDALRMANHTRVYHTKPSYQTILDAVTKQFHSGEGAIQFAPE
HHHHCCCCCCCCEEECCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEECHH
AIARSNADILNEKDLKNEFIEIYSEQGKDEARNWINLNYGPFSEEELNHRMSRYGLNPCG
HHHCCCCHHCCHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCHHHHHHHHHHCCCCHHH
EILGNDFHCNLAEVHLNQIDPKNIQEQKKAFKAAALSVACLLNHEFEVERYRKSREYDPI
HHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCE
VGVSFTGLFDFCVHAFGTPWLKWWEAGRPDNQEGRDFKKQEAKFLDSWRNIVKETVWEYC
ECEEHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DKHNLRRPNRCTTVQPAGTKSLLTGAAPGWHPPKAQRFLRRITFRKNDPIALACMDYGYS
HHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCE
VVPSQSDKDEKGCLLDNPFDPRCTEWLVEIPTEVSWANIEGADKIDINNFSALAQFDFYM
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCEECCCCHHHHHHHHHHH
QVQKYYTEHNTSATVEFRENEIEDLAKAIHNAIEHNEGYISAALLARFSANATFPRLPFE
HHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
PISKEEYLSLQKKVTERKVNNDFFDALNKYDIGELSEAGPAGCDSDKCLLPLANPKN
CCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA