Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965972

Identifier: 123965972

GI number: 123965972

Start: 667844

End: 668518

Strand: Direct

Name: 123965972

Synonym: P9515_07371

Alternate gene names: NA

Gene position: 667844-668518 (Clockwise)

Preceding gene: 123965971

Following gene: 123965975

Centisome position: 39.19

GC content: 28.74

Gene sequence:

>675_bases
TTGGATTCAAATAAAAGCAAAAACAATCCTGATAAAACACCTTATGAAATATTGGGTGTTAATGAAGGAGCTGATTTTGA
AGAGATACAAAAAGCAAGAGATATCAAAGTTAAGGAGGCTGGTGAAGATTTGCTACTTAAGGCAAAAATAGAATCATCTT
TTGATCAATTATTAATGGATAGTTTGAAAGCAAGGCAGTCAGGTAATGTTAGTTTCGAGGCTCAAAAGGCATCAAAAAAA
GAGAAACAAATTAATAAACTCATTAATAATGATTTCCCTCTTTTATCAAAAATAAAGAATATAAATAAGAACGTTAACAA
TTCAAACGAATATAGCCTTCCAAAAATAACCCCTCCATCTTTTGATAATCTTTCAATCAAATTATCTGCTGGATTATTAT
TTTTGATAATACTTTTAATTAGTCCTGATCCTTACAACAGACTTCTGCTCTCTATCTCAACATTGATACTTACTTATATT
CAAATTAAATCGGGTAAAAAGTTTATTAGTTCATTAGGTTGGAGTGTGACATTTCTTTCTATAGGATTGATATTTGGAGG
TTTATTTGAAACTAATTCATTTATTCAGGAAATATCCAATAACTCTCTATCAATTCAAAAAATTCAAAGTTTACCAGCAA
TGATAATTTTGTGGATAGGAGTAATTTTCCTATAA

Upstream 100 bases:

>100_bases
AAAAAAAGTATCACCTGTTGTTAGTGGCGTGGAACCAATTGCTTTATAAAGTCCTAATGGATAATAAAATTGGTTAATCT
ATAAATAATATAAAAAACAA

Downstream 100 bases:

>100_bases
ATTAAGCTTTAATCATTTCTTCAATCTCTTCAAAATTTATTAAATATTTATTCTTACAAAATTCGCAAACTAATTCGGCT
TTTCCTTCTTTTTTTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MDSNKSKNNPDKTPYEILGVNEGADFEEIQKARDIKVKEAGEDLLLKAKIESSFDQLLMDSLKARQSGNVSFEAQKASKK
EKQINKLINNDFPLLSKIKNINKNVNNSNEYSLPKITPPSFDNLSIKLSAGLLFLIILLISPDPYNRLLLSISTLILTYI
QIKSGKKFISSLGWSVTFLSIGLIFGGLFETNSFIQEISNNSLSIQKIQSLPAMIILWIGVIFL

Sequences:

>Translated_224_residues
MDSNKSKNNPDKTPYEILGVNEGADFEEIQKARDIKVKEAGEDLLLKAKIESSFDQLLMDSLKARQSGNVSFEAQKASKK
EKQINKLINNDFPLLSKIKNINKNVNNSNEYSLPKITPPSFDNLSIKLSAGLLFLIILLISPDPYNRLLLSISTLILTYI
QIKSGKKFISSLGWSVTFLSIGLIFGGLFETNSFIQEISNNSLSIQKIQSLPAMIILWIGVIFL
>Mature_224_residues
MDSNKSKNNPDKTPYEILGVNEGADFEEIQKARDIKVKEAGEDLLLKAKIESSFDQLLMDSLKARQSGNVSFEAQKASKK
EKQINKLINNDFPLLSKIKNINKNVNNSNEYSLPKITPPSFDNLSIKLSAGLLFLIILLISPDPYNRLLLSISTLILTYI
QIKSGKKFISSLGWSVTFLSIGLIFGGLFETNSFIQEISNNSLSIQKIQSLPAMIILWIGVIFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25011; Mature: 25011

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNKSKNNPDKTPYEILGVNEGADFEEIQKARDIKVKEAGEDLLLKAKIESSFDQLLMD
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHHHHHH
SLKARQSGNVSFEAQKASKKEKQINKLINNDFPLLSKIKNINKNVNNSNEYSLPKITPPS
HHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FDNLSIKLSAGLLFLIILLISPDPYNRLLLSISTLILTYIQIKSGKKFISSLGWSVTFLS
CCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHH
IGLIFGGLFETNSFIQEISNNSLSIQKIQSLPAMIILWIGVIFL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDSNKSKNNPDKTPYEILGVNEGADFEEIQKARDIKVKEAGEDLLLKAKIESSFDQLLMD
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHHHHHH
SLKARQSGNVSFEAQKASKKEKQINKLINNDFPLLSKIKNINKNVNNSNEYSLPKITPPS
HHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FDNLSIKLSAGLLFLIILLISPDPYNRLLLSISTLILTYIQIKSGKKFISSLGWSVTFLS
CCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHH
IGLIFGGLFETNSFIQEISNNSLSIQKIQSLPAMIILWIGVIFL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA