| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965975
Identifier: 123965975
GI number: 123965975
Start: 670146
End: 670589
Strand: Direct
Name: 123965975
Synonym: P9515_07401
Alternate gene names: NA
Gene position: 670146-670589 (Clockwise)
Preceding gene: 123965972
Following gene: 123965976
Centisome position: 39.32
GC content: 29.5
Gene sequence:
>444_bases ATGAATGTTGTATTTAGGGAAGTTGATCCTTTTAATTGTTGGATTTGGATAAAGTTTTTTGAAATTCCAGCTGAAGCAGA AAAAAATTATTTAGATGGTGTTTTTGATAGTTGGTACGTTTTAGGTAGGTTAGGTGGTTTTAATTCTGAGAATTTACAAA CTCATGAAGAGGGTTCCGAGTTAAGTTGGATGTCATACAATAATGATCAAAAAGAATCTTCCTTGCCAGCATTAATGCAT AATTTAGGTGTTATGGAATATCAAAATCTGTGGTCTAGATGTTGGGTTGATTTCGGAACGTCAGATTCTCTTTCTATTGA TATTTTAATAAATACTTTAAATGAGATCTCTAATAATTATGTAAAAATTGATCAATTAATTATTGGAGGAGAAAATAAGG ATTGGTCAATTGAGGAACATGAAGATTTAGTTTTTAAAAATTGA
Upstream 100 bases:
>100_bases CTTAAATCAAGCATTATTAATTTAATTTGAAGGTATAGATTTTAAACTTTGAATTACCTATTTATAATAATTATATAACT AAATAAAATTAACAGTAAAA
Downstream 100 bases:
>100_bases TATTCATATATGGATGATTTAATAAGATTACTTATTCAAAATGAAAGAATAATTGGTAATAAAAACAAGAATTTAAAACT TACAAAAGAAGAAGCTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNVVFREVDPFNCWIWIKFFEIPAEAEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSELSWMSYNNDQKESSLPALMH NLGVMEYQNLWSRCWVDFGTSDSLSIDILINTLNEISNNYVKIDQLIIGGENKDWSIEEHEDLVFKN
Sequences:
>Translated_147_residues MNVVFREVDPFNCWIWIKFFEIPAEAEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSELSWMSYNNDQKESSLPALMH NLGVMEYQNLWSRCWVDFGTSDSLSIDILINTLNEISNNYVKIDQLIIGGENKDWSIEEHEDLVFKN >Mature_147_residues MNVVFREVDPFNCWIWIKFFEIPAEAEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSELSWMSYNNDQKESSLPALMH NLGVMEYQNLWSRCWVDFGTSDSLSIDILINTLNEISNNYVKIDQLIIGGENKDWSIEEHEDLVFKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17181; Mature: 17181
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVVFREVDPFNCWIWIKFFEIPAEAEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSE CCEEECCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC LSWMSYNNDQKESSLPALMHNLGVMEYQNLWSRCWVDFGTSDSLSIDILINTLNEISNNY EEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCEEEEEEEEHHHHHCCCE VKIDQLIIGGENKDWSIEEHEDLVFKN EEEEEEEECCCCCCCCCCCCCCEEECC >Mature Secondary Structure MNVVFREVDPFNCWIWIKFFEIPAEAEKNYLDGVFDSWYVLGRLGGFNSENLQTHEEGSE CCEEECCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC LSWMSYNNDQKESSLPALMHNLGVMEYQNLWSRCWVDFGTSDSLSIDILINTLNEISNNY EEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCEEEEEEEEHHHHHCCCE VKIDQLIIGGENKDWSIEEHEDLVFKN EEEEEEEECCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA