Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123965962

Identifier: 123965962

GI number: 123965962

Start: 657723

End: 658979

Strand: Reverse

Name: 123965962

Synonym: P9515_07271

Alternate gene names: NA

Gene position: 658979-657723 (Counterclockwise)

Preceding gene: 123965963

Following gene: 123965961

Centisome position: 38.67

GC content: 31.98

Gene sequence:

>1257_bases
ATGAATAATAATCATAATCTGAGTAATGGGAAAATAACTTGTTGTCAAATCTGTAGTAATAAGGAATTAATAAACGTCAT
AAATTTAGGGCACCAAGCACCATGTGATTCTCTAATATGGCCAGAACAGCTAAATCAACCCGAAAAAAGATATCCTCTCA
ACTTACAAAGATGTAAAGAGTGTGGTTTAGTTCAAATAGACCATGTTGTAGAGCCTCAAGAATTATTTTTTGCTGAATAT
CCTTATAGAAGTGGAATCACTTCAACCCTTGCTAATAATCTAAGAAACACTGCATCAACTATTGTAAAAAGATATCAATT
ACCAAAAGGAGGACTAGCTGTTGATCTTGGCTCAAATGATGGCACATTACTAGAAGGTTTTCAAAAAGAAAACATGAAAG
TCCTTGGTTTTGAGCCTACTAATATAGCAAACCTAGCCAATGAGAAAGGAATAAAAACAATTCAAAAATTCTTTAATGAT
TCATTAGTTCCTGAAATAATTAAAAAGTATGGCAAAGCCGAAGTGATTACCGCTTGTAATATGTTTGCTCATGTATCTCA
ATTAGGAAGCCTAATTATGGGTGCGGAGAATCTATTAGTGGATAATGGTTTATTTGTTACTGAATCTCATTACTTATTAG
ATTTAATTGACACTGTTCAGTATGATTCGATTTATCACGAACATCTTAAGTATTATTCTGTCAAATCAATTATAAAACTT
TTTGAGTATTACAATTTTACTGTTATCGATATAGATAGAATTCCTAATTATGGAGGCTCCATAAGGGTTTATGCAAAAAA
AGGAAAATCGCATGAGGTTTCAACTAAAGTGGAAAATCTTCTTAAAGAAGAAGTGGATAGAGGCTTATATAACAATTTAA
TTTACGAGGATTTCAAAAACAAAATAAAAAAATCGAAACTTCAGCTACAAAATCTTATTTTAGATGGTAAAAATAATAAT
CTAAAAATTGTGGGAATTGGCTGTCCTGGGAGAGCTACAACATTATTGAGTTACTGCAACTTAGATGCAGATGCTTTAGA
TTATATTGCAGAACAAAGTACATCCTTAAAACTAGGATTATTCACCCCTGGAACATATATCCCGATAGTTGATGAGAGAA
TAATGTTTGAAGATCAACCAGATATTGCGATTATACTTTCATGGCACTATTGGGAGCCAATTGTTGAAAAGCTTAGAGCA
AAAGGTCTCAAATCCAAAATTATTATCCCACTTCCTGAAGTTAGGATAATCGATTGA

Upstream 100 bases:

>100_bases
TATTAGATAAATAAATATTTACGAATTTCTAAGTTCTATTGTGTATAATTATAGATTAAATCTTTTTTACTCAAATATCT
AAATTATTTTTTTGAACCCA

Downstream 100 bases:

>100_bases
TTAAATAAAAAAAAAGATGCGCTTTGGAATTATTGGAGGAGGATTTGGATATGACTCTCATTTCGAAGCTTTAAAAAATA
TAAAAGGTATAGATATTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; D-Mycarose 3-C-Methyltransferase; NDP-Hexose 3-C-Methyltransferase TylCIII; NDP-Hexose 3-C-Methyltransferase Protein; Sugar 3-C-Methyl Transferase; Methyltransferase Type; Methyltransferase Family Protein; C-3 Methyl Transferase; NDP-Hexose Methyltransferase Protein; NAD-Dependent Epimerase/Dehydratase; Methyltransferase-Like Protein; S-Adenosyl-L-Methionine-Dependent Methyltransferase; NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; S-Adenosyl-Dependent Methyltransferase; S-Adenosyl-Dependent Methyl Transferase; NDP-Hexose 3-C-Methyltransferase; EryBIII NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; C-Methyltransferase Family

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNNNHNLSNGKITCCQICSNKELINVINLGHQAPCDSLIWPEQLNQPEKRYPLNLQRCKECGLVQIDHVVEPQELFFAEY
PYRSGITSTLANNLRNTASTIVKRYQLPKGGLAVDLGSNDGTLLEGFQKENMKVLGFEPTNIANLANEKGIKTIQKFFND
SLVPEIIKKYGKAEVITACNMFAHVSQLGSLIMGAENLLVDNGLFVTESHYLLDLIDTVQYDSIYHEHLKYYSVKSIIKL
FEYYNFTVIDIDRIPNYGGSIRVYAKKGKSHEVSTKVENLLKEEVDRGLYNNLIYEDFKNKIKKSKLQLQNLILDGKNNN
LKIVGIGCPGRATTLLSYCNLDADALDYIAEQSTSLKLGLFTPGTYIPIVDERIMFEDQPDIAIILSWHYWEPIVEKLRA
KGLKSKIIIPLPEVRIID

Sequences:

>Translated_418_residues
MNNNHNLSNGKITCCQICSNKELINVINLGHQAPCDSLIWPEQLNQPEKRYPLNLQRCKECGLVQIDHVVEPQELFFAEY
PYRSGITSTLANNLRNTASTIVKRYQLPKGGLAVDLGSNDGTLLEGFQKENMKVLGFEPTNIANLANEKGIKTIQKFFND
SLVPEIIKKYGKAEVITACNMFAHVSQLGSLIMGAENLLVDNGLFVTESHYLLDLIDTVQYDSIYHEHLKYYSVKSIIKL
FEYYNFTVIDIDRIPNYGGSIRVYAKKGKSHEVSTKVENLLKEEVDRGLYNNLIYEDFKNKIKKSKLQLQNLILDGKNNN
LKIVGIGCPGRATTLLSYCNLDADALDYIAEQSTSLKLGLFTPGTYIPIVDERIMFEDQPDIAIILSWHYWEPIVEKLRA
KGLKSKIIIPLPEVRIID
>Mature_418_residues
MNNNHNLSNGKITCCQICSNKELINVINLGHQAPCDSLIWPEQLNQPEKRYPLNLQRCKECGLVQIDHVVEPQELFFAEY
PYRSGITSTLANNLRNTASTIVKRYQLPKGGLAVDLGSNDGTLLEGFQKENMKVLGFEPTNIANLANEKGIKTIQKFFND
SLVPEIIKKYGKAEVITACNMFAHVSQLGSLIMGAENLLVDNGLFVTESHYLLDLIDTVQYDSIYHEHLKYYSVKSIIKL
FEYYNFTVIDIDRIPNYGGSIRVYAKKGKSHEVSTKVENLLKEEVDRGLYNNLIYEDFKNKIKKSKLQLQNLILDGKNNN
LKIVGIGCPGRATTLLSYCNLDADALDYIAEQSTSLKLGLFTPGTYIPIVDERIMFEDQPDIAIILSWHYWEPIVEKLRA
KGLKSKIIIPLPEVRIID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47353; Mature: 47353

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNHNLSNGKITCCQICSNKELINVINLGHQAPCDSLIWPEQLNQPEKRYPLNLQRCKE
CCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHCCCCHHCCCCCHHHHHH
CGLVQIDHVVEPQELFFAEYPYRSGITSTLANNLRNTASTIVKRYQLPKGGLAVDLGSND
CCCEEECCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
GTLLEGFQKENMKVLGFEPTNIANLANEKGIKTIQKFFNDSLVPEIIKKYGKAEVITACN
CHHHHCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
MFAHVSQLGSLIMGAENLLVDNGLFVTESHYLLDLIDTVQYDSIYHEHLKYYSVKSIIKL
HHHHHHHHHHHHHCCCHHEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEYYNFTVIDIDRIPNYGGSIRVYAKKGKSHEVSTKVENLLKEEVDRGLYNNLIYEDFKN
HHHHCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIKKSKLQLQNLILDGKNNNLKIVGIGCPGRATTLLSYCNLDADALDYIAEQSTSLKLGL
HHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEE
FTPGTYIPIVDERIMFEDQPDIAIILSWHYWEPIVEKLRAKGLKSKIIIPLPEVRIID
ECCCCEEEEECCEEEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEECCCEEECC
>Mature Secondary Structure
MNNNHNLSNGKITCCQICSNKELINVINLGHQAPCDSLIWPEQLNQPEKRYPLNLQRCKE
CCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHCCCCHHCCCCCHHHHHH
CGLVQIDHVVEPQELFFAEYPYRSGITSTLANNLRNTASTIVKRYQLPKGGLAVDLGSND
CCCEEECCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
GTLLEGFQKENMKVLGFEPTNIANLANEKGIKTIQKFFNDSLVPEIIKKYGKAEVITACN
CHHHHCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
MFAHVSQLGSLIMGAENLLVDNGLFVTESHYLLDLIDTVQYDSIYHEHLKYYSVKSIIKL
HHHHHHHHHHHHHCCCHHEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEYYNFTVIDIDRIPNYGGSIRVYAKKGKSHEVSTKVENLLKEEVDRGLYNNLIYEDFKN
HHHHCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIKKSKLQLQNLILDGKNNNLKIVGIGCPGRATTLLSYCNLDADALDYIAEQSTSLKLGL
HHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEE
FTPGTYIPIVDERIMFEDQPDIAIILSWHYWEPIVEKLRAKGLKSKIIIPLPEVRIID
ECCCCEEEEECCEEEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA