| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965963
Identifier: 123965963
GI number: 123965963
Start: 659115
End: 659873
Strand: Reverse
Name: 123965963
Synonym: P9515_07281
Alternate gene names: NA
Gene position: 659873-659115 (Counterclockwise)
Preceding gene: 123965965
Following gene: 123965962
Centisome position: 38.72
GC content: 28.85
Gene sequence:
>759_bases TTGTCTGATTCTAAAAACAAAATAGATATTATTATTCCTGTCTTTAATGAAGTACATATTGCTAAATTATTTGACCTTTT AGAAAAAGATGTTTCATCAAAATTCAGAGTTCTACTTTGTTATGATGATGAATCAGATAAAACTCTTACTTCGTATAACG AGAAATCTTATAATTTCAGAATTTTCAAAATCAAGAATAAATACATTGGACCTCAAGGCGCAATCCTTTCAGGTTTTGAA GAATGTAAATCAGAGGCAGTTATTGTATATCCTGCTGATGACTTCATAAATACAAAAATTCTGGATCTAATGTATGAAAA ATATCTGATGGGAAATGATGTTGTTGTACCCAGCAGATTTATACAAGGAGGTGCGATGAGAAATTGTCCATTAATAAAGT CAATTTTAGTAAGATTAGCTTCATTTTCTCTATTTTATTTATCTAGTATTTCTGTAAAAGATGTGAGCAACGGCTTTAGA CTTTTTTCACTTAAGTATCTCAATATGGTCAAAATTGAATCTACAAAGGGATTTACTTTTTCAATTGAGTTATTAGTTAA AGCGAATAGGTTAGGACTTTCAATTGCTGAAGTTCCTTCTTGTTGGGAAGAGAGAAAATTTGGCAAAAGTAGATTTAAGA CATATCAATGGGTTTTTAATTACTTGAGATGGTATTTATATGCTCTTGAAACTTTTTGGTTGAGGAAATCACCAAATACA GTAAAATTAAAAAGATCTAAAAATGGATTATTAGTATAA
Upstream 100 bases:
>100_bases TAAATAATTTTATTATTAACATTCATTCTACTATTAGCAGTAAATAAATTATTGATTAATTAAATATAATAAGATTTACA TAAGCTTATTAATTATAAAA
Downstream 100 bases:
>100_bases AAATTCCCACATTTTGATACTATACTTAATAAATTTATTAGATAAATAAATATTTACGAATTTCTAAGTTCTATTGTGTA TAATTATAGATTAAATCTTT
Product: hypothetical protein
Products: GDP; dolichyl D-mannosyl phosphate
Alternate protein names: Dolichol-Phosphate Mannosyltransferase; Family 2 Glycosyl Transferase; Polyprenol Phosphate Mannosyl Transferase; Polyprenyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase Family Beta-Glycosyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Dolichol Monophosphate Mannose Synthase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSDSKNKIDIIIPVFNEVHIAKLFDLLEKDVSSKFRVLLCYDDESDKTLTSYNEKSYNFRIFKIKNKYIGPQGAILSGFE ECKSEAVIVYPADDFINTKILDLMYEKYLMGNDVVVPSRFIQGGAMRNCPLIKSILVRLASFSLFYLSSISVKDVSNGFR LFSLKYLNMVKIESTKGFTFSIELLVKANRLGLSIAEVPSCWEERKFGKSRFKTYQWVFNYLRWYLYALETFWLRKSPNT VKLKRSKNGLLV
Sequences:
>Translated_252_residues MSDSKNKIDIIIPVFNEVHIAKLFDLLEKDVSSKFRVLLCYDDESDKTLTSYNEKSYNFRIFKIKNKYIGPQGAILSGFE ECKSEAVIVYPADDFINTKILDLMYEKYLMGNDVVVPSRFIQGGAMRNCPLIKSILVRLASFSLFYLSSISVKDVSNGFR LFSLKYLNMVKIESTKGFTFSIELLVKANRLGLSIAEVPSCWEERKFGKSRFKTYQWVFNYLRWYLYALETFWLRKSPNT VKLKRSKNGLLV >Mature_251_residues SDSKNKIDIIIPVFNEVHIAKLFDLLEKDVSSKFRVLLCYDDESDKTLTSYNEKSYNFRIFKIKNKYIGPQGAILSGFEE CKSEAVIVYPADDFINTKILDLMYEKYLMGNDVVVPSRFIQGGAMRNCPLIKSILVRLASFSLFYLSSISVKDVSNGFRL FSLKYLNMVKIESTKGFTFSIELLVKANRLGLSIAEVPSCWEERKFGKSRFKTYQWVFNYLRWYLYALETFWLRKSPNTV KLKRSKNGLLV
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503363, Length=227, Percent_Identity=25.5506607929515, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71999402, Length=242, Percent_Identity=27.6859504132231, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.83
Molecular weight: Translated: 29266; Mature: 29134
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSKNKIDIIIPVFNEVHIAKLFDLLEKDVSSKFRVLLCYDDESDKTLTSYNEKSYNFR CCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCCCCCCEE IFKIKNKYIGPQGAILSGFEECKSEAVIVYPADDFINTKILDLMYEKYLMGNDVVVPSRF EEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEECCHHH IQGGAMRNCPLIKSILVRLASFSLFYLSSISVKDVSNGFRLFSLKYLNMVKIESTKGFTF HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEEEEEEEEECCCCEEE SIELLVKANRLGLSIAEVPSCWEERKFGKSRFKTYQWVFNYLRWYLYALETFWLRKSPNT EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCE VKLKRSKNGLLV EEEEECCCCCCC >Mature Secondary Structure SDSKNKIDIIIPVFNEVHIAKLFDLLEKDVSSKFRVLLCYDDESDKTLTSYNEKSYNFR CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCCCCCCEE IFKIKNKYIGPQGAILSGFEECKSEAVIVYPADDFINTKILDLMYEKYLMGNDVVVPSRF EEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEECCHHH IQGGAMRNCPLIKSILVRLASFSLFYLSSISVKDVSNGFRLFSLKYLNMVKIESTKGFTF HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEEEEEEEEECCCCEEE SIELLVKANRLGLSIAEVPSCWEERKFGKSRFKTYQWVFNYLRWYLYALETFWLRKSPNT EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCE VKLKRSKNGLLV EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GDPmannose; dolichyl phosphate
Specific reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA