Click here to switch to the map view.

The map label for this gene is 123965949

Identifier: 123965949

GI number: 123965949

Start: 648917

End: 650557

Strand: Reverse

Name: 123965949

Synonym: P9515_07141

Alternate gene names: NA

Gene position: 650557-648917 (Counterclockwise)

Preceding gene: 123965951

Following gene: 123965946

Centisome position: 38.17

GC content: 35.16

Gene sequence:

>1641_bases
TTGGATATAAATCCTTATGATGCAATCGTAGTAGGTTCAGGTGCCACAGGAGGAGTAGCTGCACTTACTTTAGCCGAACA
AGGAATAAGAGTGCTAGTAATAGAAGCTGGTCCTCAAATTAAAAGAACTGAGGCTAGCAGTAATGAGCCAAAAGATACCT
TAAACAGATTATCAGGAATAATATCAAAAAAACACGCTAATCAATGTCAGCATCCCGGTTATTGGAAAAATAATCCTAAT
TTATATAAAAACGAATTAAAACATCCTTATGTTCAACAAAAAAACAAGCCATTCCTTTGGACTCAAGGAAACCAATATGG
AGGAAGATCATTAACGTGGGGAGGTATTACCTTAAGATTTTCTAGAGAGGATTTTCATCCATCAAAAAAAGATGGATATG
GGCCAGATTGGCCTATTTCCTACGACGAATTATCACCTCATTATGATTTTATAGAAAATTTTTGTGGAATATATGGACAT
AAAGATAACATCAAAGAAGTCCCAAATGGTAAATATATTGGGAAGATACCTCTTACAAAAATTGAAAGTATTTTTGGCAA
TCAAGTCAAATCGAAATTAAACTATCCCTTTATTCAATCTAGAGGATTCGATCGTAATTCTTCAGTAAAAGAGGAACAAT
GGCCAAAATCTTCGAGTGTAGGGACCACATTCAAAAAAGCACTAGAGACTGGAAATGTCCAAATACTCTCTAATCACTTA
GTAGAATCATTCGAAACGGATAAAATAACAGAGCTTGCTTCAAAAATAATCATCGTAAATGTTGAAAATGGTAAAAGAAA
ATCATTAAATTGCGATTTAATTATTCTATGTGCATCAACAATCTCAACATTGAGGATACTACTTAACTCTGAAACCAAAT
CAAATTCTTCTGGTTTTAAAGATACATCTGGAAAATTAGGAAAATTTCTAATGGATCATATTTCTGTCTGTAGGTTTTTT
TCAGTTCCAAATACAACTCAAAGAAACAATATATCTAATTCGTATCCTGATCTTTCCGGAGCTGGGAGTTTTTTCATACC
CTTTGGGACAAATCTGCCCAAACCTGAAAGTATTAATTTTTTACGGGGTTATGGAATTTGGGGAGCAATTGACCGTCTAG
GAATACCAAAGTTTTTGCAAAAAGACTTAAATTCTTCTACAGGTTTTCTAATCGCTCATGGTGAGGTCCTACCAAGAGAA
GAAAATTCAGTCTCCCTTTCTGACAAAACAGACCGATGGGGGATTCCGGTCCCTCATATTGAATTCGAATGGAGTGAAAA
TGAATTAAATATGGCTAAACATATGGAGAGAACGATGCGAGATTCAATAAAAGCTGCAGATGGAAAAATCAAAGGGATCG
ATGAACTTATAAAAATCCCATATGCAGGGTTGTTTACAAAAAAATCAATTGCTCTTTCAGGAAATCCGCCACCCCCGGGA
TACTATATCCATGAAGTAGGAGGAGCACCAATGGGATTTAGAGAGGAAGATAGTGTTGTAAATAAATCAAATAGACTTTG
GAGATGTAAGAATGTTCTTGTATTAGATGGTGCATGTTGGCCCACTTCTTCATGGCAGAGTCCAACTTTAACAATGATGG
CTATAAGCAGAAGAGCTTGTTTAAAAGTTAAAAAGACTTAG

Upstream 100 bases:

>100_bases
AAAAATACTTAAATAAATTCTAACTTCTAGAGTTGAAAACATGAAATAGATTTTTTACTGAATGCTATATTTGTTTATAT
GAAAAATACTGAAGTAGATT

Downstream 100 bases:

>100_bases
AAGGCGAAAAAAGTTGATTTATGTAAATCTCGGAAACTGAATTATCAGTACAACCATTTTGAATAAGAAAAGTAGCTAAA
GCAGAATTTATAAGTTTATA

Product: glucose-methanol-choline (GMC) oxidoreductase:NAD binding site

Products: NA

Alternate protein names: Oxidoreductase; Choline Dehydrogenase; GMC Family Oxidoreductase; GMC Oxidoreductase Family Protein; Oxidoreductase Protein; Oxidoreductase GMC Family; Glucoside 3-Dehydrogenase; Fad Dependent Oxidoreductase; Glucose Dehydrogenase; Choline Dehydrogenase And Flavoproteins-Like Protein; FAD Dependent Oxidoreductase; Dehydrogluconate Dehydrogenase; Dehydrogenase; Glucase Dehydrogenase Subunit Alpha; Choline Dehydrogenase-Like Flavoprotein; Gluconate 2-Dehydrogenase; Oxidoreductase Chain; GMC Oxidoreductase Family; Oxidoreductase GMC Family Protein; Oxidoreductase-Like Protein

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MDINPYDAIVVGSGATGGVAALTLAEQGIRVLVIEAGPQIKRTEASSNEPKDTLNRLSGIISKKHANQCQHPGYWKNNPN
LYKNELKHPYVQQKNKPFLWTQGNQYGGRSLTWGGITLRFSREDFHPSKKDGYGPDWPISYDELSPHYDFIENFCGIYGH
KDNIKEVPNGKYIGKIPLTKIESIFGNQVKSKLNYPFIQSRGFDRNSSVKEEQWPKSSSVGTTFKKALETGNVQILSNHL
VESFETDKITELASKIIIVNVENGKRKSLNCDLIILCASTISTLRILLNSETKSNSSGFKDTSGKLGKFLMDHISVCRFF
SVPNTTQRNNISNSYPDLSGAGSFFIPFGTNLPKPESINFLRGYGIWGAIDRLGIPKFLQKDLNSSTGFLIAHGEVLPRE
ENSVSLSDKTDRWGIPVPHIEFEWSENELNMAKHMERTMRDSIKAADGKIKGIDELIKIPYAGLFTKKSIALSGNPPPPG
YYIHEVGGAPMGFREEDSVVNKSNRLWRCKNVLVLDGACWPTSSWQSPTLTMMAISRRACLKVKKT

Sequences:

>Translated_546_residues
MDINPYDAIVVGSGATGGVAALTLAEQGIRVLVIEAGPQIKRTEASSNEPKDTLNRLSGIISKKHANQCQHPGYWKNNPN
LYKNELKHPYVQQKNKPFLWTQGNQYGGRSLTWGGITLRFSREDFHPSKKDGYGPDWPISYDELSPHYDFIENFCGIYGH
KDNIKEVPNGKYIGKIPLTKIESIFGNQVKSKLNYPFIQSRGFDRNSSVKEEQWPKSSSVGTTFKKALETGNVQILSNHL
VESFETDKITELASKIIIVNVENGKRKSLNCDLIILCASTISTLRILLNSETKSNSSGFKDTSGKLGKFLMDHISVCRFF
SVPNTTQRNNISNSYPDLSGAGSFFIPFGTNLPKPESINFLRGYGIWGAIDRLGIPKFLQKDLNSSTGFLIAHGEVLPRE
ENSVSLSDKTDRWGIPVPHIEFEWSENELNMAKHMERTMRDSIKAADGKIKGIDELIKIPYAGLFTKKSIALSGNPPPPG
YYIHEVGGAPMGFREEDSVVNKSNRLWRCKNVLVLDGACWPTSSWQSPTLTMMAISRRACLKVKKT
>Mature_546_residues
MDINPYDAIVVGSGATGGVAALTLAEQGIRVLVIEAGPQIKRTEASSNEPKDTLNRLSGIISKKHANQCQHPGYWKNNPN
LYKNELKHPYVQQKNKPFLWTQGNQYGGRSLTWGGITLRFSREDFHPSKKDGYGPDWPISYDELSPHYDFIENFCGIYGH
KDNIKEVPNGKYIGKIPLTKIESIFGNQVKSKLNYPFIQSRGFDRNSSVKEEQWPKSSSVGTTFKKALETGNVQILSNHL
VESFETDKITELASKIIIVNVENGKRKSLNCDLIILCASTISTLRILLNSETKSNSSGFKDTSGKLGKFLMDHISVCRFF
SVPNTTQRNNISNSYPDLSGAGSFFIPFGTNLPKPESINFLRGYGIWGAIDRLGIPKFLQKDLNSSTGFLIAHGEVLPRE
ENSVSLSDKTDRWGIPVPHIEFEWSENELNMAKHMERTMRDSIKAADGKIKGIDELIKIPYAGLFTKKSIALSGNPPPPG
YYIHEVGGAPMGFREEDSVVNKSNRLWRCKNVLVLDGACWPTSSWQSPTLTMMAISRRACLKVKKT

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60942; Mature: 60942

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINPYDAIVVGSGATGGVAALTLAEQGIRVLVIEAGPQIKRTEASSNEPKDTLNRLSGI
CCCCCCCEEEECCCCCCCCEEEEEHHCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHH
ISKKHANQCQHPGYWKNNPNLYKNELKHPYVQQKNKPFLWTQGNQYGGRSLTWGGITLRF
HHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHCCCCCEEEECCCCCCCCEEEECCEEEEE
SREDFHPSKKDGYGPDWPISYDELSPHYDFIENFCGIYGHKDNIKEVPNGKYIGKIPLTK
ECCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHH
IESIFGNQVKSKLNYPFIQSRGFDRNSSVKEEQWPKSSSVGTTFKKALETGNVQILSNHL
HHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEEEEEHHH
VESFETDKITELASKIIIVNVENGKRKSLNCDLIILCASTISTLRILLNSETKSNSSGFK
HHHHCHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC
DTSGKLGKFLMDHISVCRFFSVPNTTQRNNISNSYPDLSGAGSFFIPFGTNLPKPESINF
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
LRGYGIWGAIDRLGIPKFLQKDLNSSTGFLIAHGEVLPREENSVSLSDKTDRWGIPVPHI
EECCCHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCE
EFEWSENELNMAKHMERTMRDSIKAADGKIKGIDELIKIPYAGLFTKKSIALSGNPPPPG
EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCEEEECCCCCCCC
YYIHEVGGAPMGFREEDSVVNKSNRLWRCKNVLVLDGACWPTSSWQSPTLTMMAISRRAC
EEEEECCCCCCCCCCCHHHHCCCCCEEEECCEEEECCCCCCCCCCCCCCEEEHHHHHHHH
LKVKKT
EEECCC
>Mature Secondary Structure
MDINPYDAIVVGSGATGGVAALTLAEQGIRVLVIEAGPQIKRTEASSNEPKDTLNRLSGI
CCCCCCCEEEECCCCCCCCEEEEEHHCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHH
ISKKHANQCQHPGYWKNNPNLYKNELKHPYVQQKNKPFLWTQGNQYGGRSLTWGGITLRF
HHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHCCCCCEEEECCCCCCCCEEEECCEEEEE
SREDFHPSKKDGYGPDWPISYDELSPHYDFIENFCGIYGHKDNIKEVPNGKYIGKIPLTK
ECCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHH
IESIFGNQVKSKLNYPFIQSRGFDRNSSVKEEQWPKSSSVGTTFKKALETGNVQILSNHL
HHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEEEEEHHH
VESFETDKITELASKIIIVNVENGKRKSLNCDLIILCASTISTLRILLNSETKSNSSGFK
HHHHCHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC
DTSGKLGKFLMDHISVCRFFSVPNTTQRNNISNSYPDLSGAGSFFIPFGTNLPKPESINF
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
LRGYGIWGAIDRLGIPKFLQKDLNSSTGFLIAHGEVLPREENSVSLSDKTDRWGIPVPHI
EECCCHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCE
EFEWSENELNMAKHMERTMRDSIKAADGKIKGIDELIKIPYAGLFTKKSIALSGNPPPPG
EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCEEEECCCCCCCC
YYIHEVGGAPMGFREEDSVVNKSNRLWRCKNVLVLDGACWPTSSWQSPTLTMMAISRRAC
EEEEECCCCCCCCCCCHHHHCCCCCEEEECCEEEECCCCCCCCCCCCCCEEEHHHHHHHH
LKVKKT
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA