| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965946
Identifier: 123965946
GI number: 123965946
Start: 645865
End: 647145
Strand: Reverse
Name: 123965946
Synonym: P9515_07111
Alternate gene names: NA
Gene position: 647145-645865 (Counterclockwise)
Preceding gene: 123965949
Following gene: 123965945
Centisome position: 37.97
GC content: 30.21
Gene sequence:
>1281_bases GTGAAAAAAAATAAAAATTTACTTGAAGTCCCAAATATAAACTCCAGTGATGCGCAACTTAAAAAAATAATTTATAAAGT TGAGGATAATATATTTAATCGGTTCTTCAATTCATTTTCAAAATCTGAATATCTATGCGTCTGCAGCGGAGGTACAACAT CAAGTTGTGCTAGAGATAATTTTATTACTCTGGATTTAAGAAAAGAATATGATCATATTCATCTAGAAAAAGAAAAGAAT TTAATAAAGATCGGAGGTGGAGTAATTATGAAGGATCTAATGAATTTTTTAGGGAGTCAAAATAAAATTTTCCCTACTGG CCTATCAAAACTCCCTGGAGCAGGATATTTACTCACAGGTGGAATAAGTCCTCTCAGTAGAAGGTATGGACTGGCCATAG ACAATATCGAAACCATAAAAGGATATCTAGGTAATGGGACATTCATATCATTAGAAAAAAACAATCTAAGTTCAGACCAA AAACTTCTATGGGAAGGATTTAAAGGTGCTGCTCCTTTCCTTGCAATAATTACAGAAATCGGGCTCAAAACTTTCCAAGC TCACCCTATTCAAATTATTGAGGGATTTATTAATGACAATGAACTTTCAAAGATTATTAATTTAGCAGAGGGATTTCCAG AAAATTTAAGCCTTCAATGGATTTACGCTCAAGATATATATATTTACATTTTAGCGGAAATAAGAAATGATTTAGATAAA GAAATCACAAAAAAATATTTAAACAAACTTGAAAATTTTTCTTCTCTCAAAATAAAAACTTATGAGAACTATAATCAGAT AAATTTCTTTCCCAAAGAATTAGATCTTTTTGAATTAAATAAGAATAACCATTCTGAAGTAATAAGTCTCCTAGGGGAAG ATTTAAAAGAGCGTATTCAAATTTTTATCAAGTGTATGAAAGAAATAATTCGAAGCAAACCAAATAATTCTTGTTATGTC GCCTCACAGCAGCTTGGAGGAAAGACAAAAGAAATTGATCCTAAATCAAGTTTCTTTATTCATCGAAAAAGTACTTGGAA ACCTTGGATCTATGCCTCATGGAAAAAAGATGATCTTAAAGAAAAAGAAATTGTTTTGAATTGGATGAATGAATCCTGGG AAAAGCTAAAAATATTTTTCCCCAAAATACATCTAGCTCAAATTCACAATCATTTAAATTCACACGAAGAAGAAGTCTAT TTATCTTTTGAGGAAAGACTTAGTGAATTAAAAACTTTAAAGAATATTTGTGATCCAGAAAGTATTTTGCCACCTCTATA G
Upstream 100 bases:
>100_bases CCACAAATGAGGATCCCAATTTTCTTATTTAAGTTCGAATCTAAAGTATCCAATTTTAATCAATTACTTATATCATGATA GTAAGGATGGACAATCAGTA
Downstream 100 bases:
>100_bases AGTAACTTTTTAAGTATAAAAGATATTAAAAATGTCAAATTTCACCAAATATTTATCTAAAAATTGGTTAGATGATCCAA AATCTAATATTCTTTCGGGT
Product: FAD linked oxidase, N-terminal
Products: NA
Alternate protein names: FAD Linked Oxidase N-Terminal Domain Protein; Oxidoreductase; FAD/FMN-Containing Dehydrogenase
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MKKNKNLLEVPNINSSDAQLKKIIYKVEDNIFNRFFNSFSKSEYLCVCSGGTTSSCARDNFITLDLRKEYDHIHLEKEKN LIKIGGGVIMKDLMNFLGSQNKIFPTGLSKLPGAGYLLTGGISPLSRRYGLAIDNIETIKGYLGNGTFISLEKNNLSSDQ KLLWEGFKGAAPFLAIITEIGLKTFQAHPIQIIEGFINDNELSKIINLAEGFPENLSLQWIYAQDIYIYILAEIRNDLDK EITKKYLNKLENFSSLKIKTYENYNQINFFPKELDLFELNKNNHSEVISLLGEDLKERIQIFIKCMKEIIRSKPNNSCYV ASQQLGGKTKEIDPKSSFFIHRKSTWKPWIYASWKKDDLKEKEIVLNWMNESWEKLKIFFPKIHLAQIHNHLNSHEEEVY LSFEERLSELKTLKNICDPESILPPL
Sequences:
>Translated_426_residues MKKNKNLLEVPNINSSDAQLKKIIYKVEDNIFNRFFNSFSKSEYLCVCSGGTTSSCARDNFITLDLRKEYDHIHLEKEKN LIKIGGGVIMKDLMNFLGSQNKIFPTGLSKLPGAGYLLTGGISPLSRRYGLAIDNIETIKGYLGNGTFISLEKNNLSSDQ KLLWEGFKGAAPFLAIITEIGLKTFQAHPIQIIEGFINDNELSKIINLAEGFPENLSLQWIYAQDIYIYILAEIRNDLDK EITKKYLNKLENFSSLKIKTYENYNQINFFPKELDLFELNKNNHSEVISLLGEDLKERIQIFIKCMKEIIRSKPNNSCYV ASQQLGGKTKEIDPKSSFFIHRKSTWKPWIYASWKKDDLKEKEIVLNWMNESWEKLKIFFPKIHLAQIHNHLNSHEEEVY LSFEERLSELKTLKNICDPESILPPL >Mature_426_residues MKKNKNLLEVPNINSSDAQLKKIIYKVEDNIFNRFFNSFSKSEYLCVCSGGTTSSCARDNFITLDLRKEYDHIHLEKEKN LIKIGGGVIMKDLMNFLGSQNKIFPTGLSKLPGAGYLLTGGISPLSRRYGLAIDNIETIKGYLGNGTFISLEKNNLSSDQ KLLWEGFKGAAPFLAIITEIGLKTFQAHPIQIIEGFINDNELSKIINLAEGFPENLSLQWIYAQDIYIYILAEIRNDLDK EITKKYLNKLENFSSLKIKTYENYNQINFFPKELDLFELNKNNHSEVISLLGEDLKERIQIFIKCMKEIIRSKPNNSCYV ASQQLGGKTKEIDPKSSFFIHRKSTWKPWIYASWKKDDLKEKEIVLNWMNESWEKLKIFFPKIHLAQIHNHLNSHEEEVY LSFEERLSELKTLKNICDPESILPPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49195; Mature: 49195
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKNLLEVPNINSSDAQLKKIIYKVEDNIFNRFFNSFSKSEYLCVCSGGTTSSCARDN CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC FITLDLRKEYDHIHLEKEKNLIKIGGGVIMKDLMNFLGSQNKIFPTGLSKLPGAGYLLTG EEEEEEECCCCCEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC GISPLSRRYGLAIDNIETIKGYLGNGTFISLEKNNLSSDQKLLWEGFKGAAPFLAIITEI CCCHHHHHHCCEECCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHH GLKTFQAHPIQIIEGFINDNELSKIINLAEGFPENLSLQWIYAQDIYIYILAEIRNDLDK HHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEHHHHHHHHHHH EITKKYLNKLENFSSLKIKTYENYNQINFFPKELDLFELNKNNHSEVISLLGEDLKERIQ HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH IFIKCMKEIIRSKPNNSCYVASQQLGGKTKEIDPKSSFFIHRKSTWKPWIYASWKKDDLK HHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCC EKEIVLNWMNESWEKLKIFFPKIHLAQIHNHLNSHEEEVYLSFEERLSELKTLKNICDPE HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHCCCH SILPPL HCCCCC >Mature Secondary Structure MKKNKNLLEVPNINSSDAQLKKIIYKVEDNIFNRFFNSFSKSEYLCVCSGGTTSSCARDN CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC FITLDLRKEYDHIHLEKEKNLIKIGGGVIMKDLMNFLGSQNKIFPTGLSKLPGAGYLLTG EEEEEEECCCCCEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC GISPLSRRYGLAIDNIETIKGYLGNGTFISLEKNNLSSDQKLLWEGFKGAAPFLAIITEI CCCHHHHHHCCEECCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHH GLKTFQAHPIQIIEGFINDNELSKIINLAEGFPENLSLQWIYAQDIYIYILAEIRNDLDK HHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEHHHHHHHHHHH EITKKYLNKLENFSSLKIKTYENYNQINFFPKELDLFELNKNNHSEVISLLGEDLKERIQ HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH IFIKCMKEIIRSKPNNSCYVASQQLGGKTKEIDPKSSFFIHRKSTWKPWIYASWKKDDLK HHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCC EKEIVLNWMNESWEKLKIFFPKIHLAQIHNHLNSHEEEVYLSFEERLSELKTLKNICDPE HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHCCCH SILPPL HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA