| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is mas1 [H]
Identifier: 123965933
GI number: 123965933
Start: 631867
End: 632574
Strand: Reverse
Name: mas1 [H]
Synonym: P9515_06981
Alternate gene names: 123965933
Gene position: 632574-631867 (Counterclockwise)
Preceding gene: 123965934
Following gene: 123965931
Centisome position: 37.12
GC content: 31.07
Gene sequence:
>708_bases ATGAGAACTATACTAATAAGCGGAGCCAACAGAGGGATAGGTTTAAATATTGCACATAGAGAATTAAAAGCAGGAAATAG AATTAGCATTGGAATTAGAGATTTAGAATCTATTAAAGGGAGCGTTATTGATCCAAATAATTGGCGCAAAGATAAAATTC TTATTAATAAATACGACGCATTAGATAAGTTATCTGCCGAAAAATGGATTAAAAATACGATCTCTAATTTTGGAGGTTTT GATTCATTAATAAATTGCTCTGGGATACTTTCAAAAATTCCTTTTTTATATAAAGATGGGGATGAAAAAGAAATTTTGAA TACTTTAAATATAAATTTTTTAGCTATTTGGAATCTATGCAGACTGTCTTGGGAACACTTAAGTAAATCTAATAATGGAA GAATTATAGTTTTAGTCTCAATGAGTGGCAAAAGGTCTAAAGGAGATTTAGCTGCATATTCCGCATCTAAATTCGCGTTG ATGAGTCTTTGCCAAACAATAAAGAACAAAGGTTGGGAAGAAAATATTAGGGTTACGGCTATCTGTCCTGGTTGGGTTAA TACAGATATGGCTGAGAAGATTTCATCATTAGAAAAGTCAAAAATGACTCAACCAAATGATATCGCTGAGATCTGTTCTA CTATATTGAAATTACCAATGCAGTCAGTTCCTTTTGAAATAGCTTTAAATTGTAATCATGAAATTTAA
Upstream 100 bases:
>100_bases TAAGGGCTCCTTGGAGCGTCAAAAAGGGATTAATGATTATGCATGGTAAAGAATTAAAAATGTTACTCAGGATAGTTTTG CCTAATATATAATTAAAAGA
Downstream 100 bases:
>100_bases TTTAATCTGAACATTAAAAAAGACATTGTAATCATAGCAATTGCCATAAAAAAACCTTTTATTCTATTAGTAACTAATGA AAACAGAGATAAATCTTCCG
Product: short-chain dehydrogenase/reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRTILISGANRGIGLNIAHRELKAGNRISIGIRDLESIKGSVIDPNNWRKDKILINKYDALDKLSAEKWIKNTISNFGGF DSLINCSGILSKIPFLYKDGDEKEILNTLNINFLAIWNLCRLSWEHLSKSNNGRIIVLVSMSGKRSKGDLAAYSASKFAL MSLCQTIKNKGWEENIRVTAICPGWVNTDMAEKISSLEKSKMTQPNDIAEICSTILKLPMQSVPFEIALNCNHEI
Sequences:
>Translated_235_residues MRTILISGANRGIGLNIAHRELKAGNRISIGIRDLESIKGSVIDPNNWRKDKILINKYDALDKLSAEKWIKNTISNFGGF DSLINCSGILSKIPFLYKDGDEKEILNTLNINFLAIWNLCRLSWEHLSKSNNGRIIVLVSMSGKRSKGDLAAYSASKFAL MSLCQTIKNKGWEENIRVTAICPGWVNTDMAEKISSLEKSKMTQPNDIAEICSTILKLPMQSVPFEIALNCNHEI >Mature_235_residues MRTILISGANRGIGLNIAHRELKAGNRISIGIRDLESIKGSVIDPNNWRKDKILINKYDALDKLSAEKWIKNTISNFGGF DSLINCSGILSKIPFLYKDGDEKEILNTLNINFLAIWNLCRLSWEHLSKSNNGRIIVLVSMSGKRSKGDLAAYSASKFAL MSLCQTIKNKGWEENIRVTAICPGWVNTDMAEKISSLEKSKMTQPNDIAEICSTILKLPMQSVPFEIALNCNHEI
Specific function: Reduces deoxy-fructosyl-glutamine to mannopine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4504505, Length=220, Percent_Identity=27.7272727272727, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI31542939, Length=207, Percent_Identity=26.5700483091787, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI87082100, Length=230, Percent_Identity=26.9565217391304, Blast_Score=80, Evalue=8e-17, Organism=Escherichia coli, GI1787335, Length=198, Percent_Identity=26.7676767676768, Blast_Score=69, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17561402, Length=223, Percent_Identity=26.0089686098655, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71994600, Length=240, Percent_Identity=27.0833333333333, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71994604, Length=240, Percent_Identity=23.75, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=210, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI21356301, Length=204, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI21358495, Length=193, Percent_Identity=24.3523316062176, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24644339, Length=241, Percent_Identity=23.6514522821577, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR013078 - InterPro: IPR015845 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short; PF00300 PGAM [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26255; Mature: 26255
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTILISGANRGIGLNIAHRELKAGNRISIGIRDLESIKGSVIDPNNWRKDKILINKYDA CCEEEEECCCCCEEEEEEHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCEEEEEHHHH LDKLSAEKWIKNTISNFGGFDSLINCSGILSKIPFLYKDGDEKEILNTLNINFLAIWNLC HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCHHHHHHHHH RLSWEHLSKSNNGRIIVLVSMSGKRSKGDLAAYSASKFALMSLCQTIKNKGWEENIRVTA HHHHHHHCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEE ICPGWVNTDMAEKISSLEKSKMTQPNDIAEICSTILKLPMQSVPFEIALNCNHEI EECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCEEEEECCCCCC >Mature Secondary Structure MRTILISGANRGIGLNIAHRELKAGNRISIGIRDLESIKGSVIDPNNWRKDKILINKYDA CCEEEEECCCCCEEEEEEHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCEEEEEHHHH LDKLSAEKWIKNTISNFGGFDSLINCSGILSKIPFLYKDGDEKEILNTLNINFLAIWNLC HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCHHHHHHHHH RLSWEHLSKSNNGRIIVLVSMSGKRSKGDLAAYSASKFALMSLCQTIKNKGWEENIRVTA HHHHHHHCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEE ICPGWVNTDMAEKISSLEKSKMTQPNDIAEICSTILKLPMQSVPFEIALNCNHEI EECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA