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The map label for this gene is crtL [H]

Identifier: 123965934

GI number: 123965934

Start: 632583

End: 633866

Strand: Reverse

Name: crtL [H]

Synonym: P9515_06991

Alternate gene names: 123965934

Gene position: 633866-632583 (Counterclockwise)

Preceding gene: 123965936

Following gene: 123965933

Centisome position: 37.19

GC content: 34.89

Gene sequence:

>1284_bases
ATGTCTTCCAAAGGTTTACCAGATGTACTAGTTTTGGGCGCAGGACCGGCAGGGATGGCGATTGCATCGGCTTTAGGTAA
AGAGAAGTTAGAGGTAGAGGTACTCTCACCTAAGGGCCCTGACGAACCTTGGCCAAATACTTATGGTATATGGGGAAAGG
AAGTAGATCAACTTGGACTTCAGGATTTACTTGAGTATAGATGGAAAAATACCGTTAGTTTTTTTGGACATGGTTCTATT
GAAGAACATCACTATGAAAACAAAGCAACCGAGCACTCTTTAGATTATGGATTATTTGATAAGAAGAAATTACATAGTTA
CTGGTTAAATGAATGTAATAAGTCCCTTATTAAGTGGCATGAAGGTTTTGCAGAGAAGATAAATTTTGAAAAATATAAAA
CTACAGTTACTACCAAAAATGGGGAAACTTACTCAGCAAGATTAGTTGTAGATGCAACTGGATATGATCCCGTATTTCTT
AAATTAAAATCATGTGGACCATTAGCAGTTCAGACTTGTTATGGGATAGTAGGAACTTTTAGTAAGCCTCCACTAAAAAA
AGGCCAATTTGTCCTAATGGATTATCGAAATGATCATTTAAACGAAGAACAAAAAAAAGAACCTCCTACTTTTTTGTATG
CAATGGATATGGGGAATGGTAAGTATTTTCTTGAAGAGACTTCTCTTGGATTAGTAAATCCTTTGACAATGGAAAATCTA
AAGGAAAGGTTAGAGAAAAGGCTTTCTTACAGAAATATATCAATTACCAGCATGCAACATGAAGAACTCGGTTTGTTTTT
ACCAATGAATATGCCTATCCCAAATTTCAAACAACAAATATTAGGCTATGGTGGCGCGGCCTCAATGGTTCATCCAGCAT
CTGGATATTTAATTGGTAACGTCCTCAGAAGAGCTCCATTAGTCGCAAAAGCCATATCAACGGCAATGAATGATAAGAAA
CTAAGTACCTATAATATTGCTCGTAAAGGATGGGAGAGTTTATGGCCAACAGAATTAATAAGAAAAAAATCAATTTATCA
ATTTGGTTTAGAAAAACTAATGAGATTCGATGAGAAATTATTAAGAGAATTTTTTGGCAGTTTTTTTCAATTACCAAAAA
CTCAATGGTATGGATTTCTAACTGATACACTCTCCTTAAGAGAAATAGTATACGCAATGTGCATAATGTTTATAAGGGCT
CCTTGGAGCGTCAAAAAGGGATTAATGATTATGCATGGTAAAGAATTAAAAATGTTACTCAGGATAGTTTTGCCTAATAT
ATAA

Upstream 100 bases:

>100_bases
ATTTATTCTCATTACAAAATTTTGAATGAATTGTAAAAAAGAAATTTCAGATACTTTTTATTTTTTCGAAAAATTTTATA
ACTTTAAAATTTTATAATTA

Downstream 100 bases:

>100_bases
TTAAAAGAATGAGAACTATACTAATAAGCGGAGCCAACAGAGGGATAGGTTTAAATATTGCACATAGAGAATTAAAAGCA
GGAAATAGAATTAGCATTGG

Product: putative lycopene epsilon cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSSKGLPDVLVLGAGPAGMAIASALGKEKLEVEVLSPKGPDEPWPNTYGIWGKEVDQLGLQDLLEYRWKNTVSFFGHGSI
EEHHYENKATEHSLDYGLFDKKKLHSYWLNECNKSLIKWHEGFAEKINFEKYKTTVTTKNGETYSARLVVDATGYDPVFL
KLKSCGPLAVQTCYGIVGTFSKPPLKKGQFVLMDYRNDHLNEEQKKEPPTFLYAMDMGNGKYFLEETSLGLVNPLTMENL
KERLEKRLSYRNISITSMQHEELGLFLPMNMPIPNFKQQILGYGGAASMVHPASGYLIGNVLRRAPLVAKAISTAMNDKK
LSTYNIARKGWESLWPTELIRKKSIYQFGLEKLMRFDEKLLREFFGSFFQLPKTQWYGFLTDTLSLREIVYAMCIMFIRA
PWSVKKGLMIMHGKELKMLLRIVLPNI

Sequences:

>Translated_427_residues
MSSKGLPDVLVLGAGPAGMAIASALGKEKLEVEVLSPKGPDEPWPNTYGIWGKEVDQLGLQDLLEYRWKNTVSFFGHGSI
EEHHYENKATEHSLDYGLFDKKKLHSYWLNECNKSLIKWHEGFAEKINFEKYKTTVTTKNGETYSARLVVDATGYDPVFL
KLKSCGPLAVQTCYGIVGTFSKPPLKKGQFVLMDYRNDHLNEEQKKEPPTFLYAMDMGNGKYFLEETSLGLVNPLTMENL
KERLEKRLSYRNISITSMQHEELGLFLPMNMPIPNFKQQILGYGGAASMVHPASGYLIGNVLRRAPLVAKAISTAMNDKK
LSTYNIARKGWESLWPTELIRKKSIYQFGLEKLMRFDEKLLREFFGSFFQLPKTQWYGFLTDTLSLREIVYAMCIMFIRA
PWSVKKGLMIMHGKELKMLLRIVLPNI
>Mature_426_residues
SSKGLPDVLVLGAGPAGMAIASALGKEKLEVEVLSPKGPDEPWPNTYGIWGKEVDQLGLQDLLEYRWKNTVSFFGHGSIE
EHHYENKATEHSLDYGLFDKKKLHSYWLNECNKSLIKWHEGFAEKINFEKYKTTVTTKNGETYSARLVVDATGYDPVFLK
LKSCGPLAVQTCYGIVGTFSKPPLKKGQFVLMDYRNDHLNEEQKKEPPTFLYAMDMGNGKYFLEETSLGLVNPLTMENLK
ERLEKRLSYRNISITSMQHEELGLFLPMNMPIPNFKQQILGYGGAASMVHPASGYLIGNVLRRAPLVAKAISTAMNDKKL
STYNIARKGWESLWPTELIRKKSIYQFGLEKLMRFDEKLLREFFGSFFQLPKTQWYGFLTDTLSLREIVYAMCIMFIRAP
WSVKKGLMIMHGKELKMLLRIVLPNI

Specific function: Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lycopene cyclase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010108
- InterPro:   IPR008671
- InterPro:   IPR000103 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 48768; Mature: 48637

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKGLPDVLVLGAGPAGMAIASALGKEKLEVEVLSPKGPDEPWPNTYGIWGKEVDQLGL
CCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
QDLLEYRWKNTVSFFGHGSIEEHHYENKATEHSLDYGLFDKKKLHSYWLNECNKSLIKWH
HHHHHHHHCCCCCEEECCCCHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EGFAEKINFEKYKTTVTTKNGETYSARLVVDATGYDPVFLKLKSCGPLAVQTCYGIVGTF
HHHHHHCCCHHHEEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCC
SKPPLKKGQFVLMDYRNDHLNEEQKKEPPTFLYAMDMGNGKYFLEETSLGLVNPLTMENL
CCCCCCCCCEEEEECCCCCCCCHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHH
KERLEKRLSYRNISITSMQHEELGLFLPMNMPIPNFKQQILGYGGAASMVHPASGYLIGN
HHHHHHHHHHCCEEEEEECHHHCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHH
VLRRAPLVAKAISTAMNDKKLSTYNIARKGWESLWPTELIRKKSIYQFGLEKLMRFDEKL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LREFFGSFFQLPKTQWYGFLTDTLSLREIVYAMCIMFIRAPWSVKKGLMIMHGKELKMLL
HHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECHHHHHHH
RIVLPNI
HHHCCCC
>Mature Secondary Structure 
SSKGLPDVLVLGAGPAGMAIASALGKEKLEVEVLSPKGPDEPWPNTYGIWGKEVDQLGL
CCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
QDLLEYRWKNTVSFFGHGSIEEHHYENKATEHSLDYGLFDKKKLHSYWLNECNKSLIKWH
HHHHHHHHCCCCCEEECCCCHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EGFAEKINFEKYKTTVTTKNGETYSARLVVDATGYDPVFLKLKSCGPLAVQTCYGIVGTF
HHHHHHCCCHHHEEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCC
SKPPLKKGQFVLMDYRNDHLNEEQKKEPPTFLYAMDMGNGKYFLEETSLGLVNPLTMENL
CCCCCCCCCEEEEECCCCCCCCHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHH
KERLEKRLSYRNISITSMQHEELGLFLPMNMPIPNFKQQILGYGGAASMVHPASGYLIGN
HHHHHHHHHHCCEEEEEECHHHCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHH
VLRRAPLVAKAISTAMNDKKLSTYNIARKGWESLWPTELIRKKSIYQFGLEKLMRFDEKL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LREFFGSFFQLPKTQWYGFLTDTLSLREIVYAMCIMFIRAPWSVKKGLMIMHGKELKMLL
HHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECHHHHHHH
RIVLPNI
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7919981 [H]