| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is murI [H]
Identifier: 123965917
GI number: 123965917
Start: 618892
End: 619686
Strand: Direct
Name: murI [H]
Synonym: P9515_06821
Alternate gene names: 123965917
Gene position: 618892-619686 (Clockwise)
Preceding gene: 123965916
Following gene: 123965918
Centisome position: 36.32
GC content: 27.67
Gene sequence:
>795_bases GTGAAAGTTAAAATAGGAATTTTTGACAGTGGAATAGGAGGGTTTACGATCCTTGATTATTTACTTAAGACTCGCAAGGA TCTTGAGATTTTTTACTTGGCAGATACAAAGAGAGTTCCTTATGGCGATAAAGATTTTGAACAAATAAGAATTATTGCAA AAGAAATTTGTAATTGGTTTGAAGATAAGAATTTGGATGCATTGCTAGTAGCCTGCAATACGACAAATGCATGTGCTTTA GATATTTTAGAAAATCATCTGGGAATACCTGTTTTTGATCTAATTAATTCAGTTTCAGAAATAGTGAGTAAAAAATGTAT AGGAGTTTTAGCAACTCCTGCTACCATTAAAACTTCTTATTACAAAAAAATAATAGAATCTAAAGGAGAAAATATAAAAG TGTTCCAGCAGGCATGTCCTGAATTTGTATCAGAGATAGAAAAAACCAAGCTAAATTTAAATAAATTAAATTATCTTTCG GATTCATATCTAAATCCTTTATTTAAAAAAAATATTGAAGAAATAATACTTGGATGTACCCATTATCCTCTGATTTTTAA CGTTTTAGAAAATAAAATACCTTCAAATATAAAAATTATTGATCCCTCAGTTGCTTTAGTAAATAAATTTAATAATTCAT TCTTAATTCCAAAAAATGACTGCAATAATAGTATATCTCAAGAAAATGTAAAGTTCTTTGTCACCTCAAAAAGTGAAGAA TTTTCTAAAAAAGTAAAATATTGGTTAGAAATTAATAAAGAAATTAGGCTAGTTAACCTCCGAAGCAATGCTTGA
Upstream 100 bases:
>100_bases CAGGAAGATTAGATGCGAGAAGGTTAGAAAAATCTATTCATCGTGAAAGAATAGCTTATGCAATTACAAAAGGTATTCTT GAATATCTTTCTAAGGCAGG
Downstream 100 bases:
>100_bases TTCTTTAGTATATTAAGGAGGTCAATTATGAATACAGTAACAGAACTTCTACAGCCAGTTGAAAATGATCTTGATGATCT TATTCTCGAACTGAAAAATT
Product: putative aspartate and glutamate racemases:glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MKVKIGIFDSGIGGFTILDYLLKTRKDLEIFYLADTKRVPYGDKDFEQIRIIAKEICNWFEDKNLDALLVACNTTNACAL DILENHLGIPVFDLINSVSEIVSKKCIGVLATPATIKTSYYKKIIESKGENIKVFQQACPEFVSEIEKTKLNLNKLNYLS DSYLNPLFKKNIEEIILGCTHYPLIFNVLENKIPSNIKIIDPSVALVNKFNNSFLIPKNDCNNSISQENVKFFVTSKSEE FSKKVKYWLEINKEIRLVNLRSNA
Sequences:
>Translated_264_residues MKVKIGIFDSGIGGFTILDYLLKTRKDLEIFYLADTKRVPYGDKDFEQIRIIAKEICNWFEDKNLDALLVACNTTNACAL DILENHLGIPVFDLINSVSEIVSKKCIGVLATPATIKTSYYKKIIESKGENIKVFQQACPEFVSEIEKTKLNLNKLNYLS DSYLNPLFKKNIEEIILGCTHYPLIFNVLENKIPSNIKIIDPSVALVNKFNNSFLIPKNDCNNSISQENVKFFVTSKSEE FSKKVKYWLEINKEIRLVNLRSNA >Mature_264_residues MKVKIGIFDSGIGGFTILDYLLKTRKDLEIFYLADTKRVPYGDKDFEQIRIIAKEICNWFEDKNLDALLVACNTTNACAL DILENHLGIPVFDLINSVSEIVSKKCIGVLATPATIKTSYYKKIIESKGENIKVFQQACPEFVSEIEKTKLNLNKLNYLS DSYLNPLFKKNIEEIILGCTHYPLIFNVLENKIPSNIKIIDPSVALVNKFNNSFLIPKNDCNNSISQENVKFFVTSKSEE FSKKVKYWLEINKEIRLVNLRSNA
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=237, Percent_Identity=26.1603375527426, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 30133; Mature: 30133
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKIGIFDSGIGGFTILDYLLKTRKDLEIFYLADTKRVPYGDKDFEQIRIIAKEICNWF CEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH EDKNLDALLVACNTTNACALDILENHLGIPVFDLINSVSEIVSKKCIGVLATPATIKTSY CCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHH YKKIIESKGENIKVFQQACPEFVSEIEKTKLNLNKLNYLSDSYLNPLFKKNIEEIILGCT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCHHHHHHCCC HYPLIFNVLENKIPSNIKIIDPSVALVNKFNNSFLIPKNDCNNSISQENVKFFVTSKSEE CHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEEECCCHH FSKKVKYWLEINKEIRLVNLRSNA HHHHHHHHHEECCEEEEEEECCCC >Mature Secondary Structure MKVKIGIFDSGIGGFTILDYLLKTRKDLEIFYLADTKRVPYGDKDFEQIRIIAKEICNWF CEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH EDKNLDALLVACNTTNACALDILENHLGIPVFDLINSVSEIVSKKCIGVLATPATIKTSY CCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHH YKKIIESKGENIKVFQQACPEFVSEIEKTKLNLNKLNYLSDSYLNPLFKKNIEEIILGCT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCHHHHHHCCC HYPLIFNVLENKIPSNIKIIDPSVALVNKFNNSFLIPKNDCNNSISQENVKFFVTSKSEE CHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEEECCCHH FSKKVKYWLEINKEIRLVNLRSNA HHHHHHHHHEECCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA