| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123965888
Identifier: 123965888
GI number: 123965888
Start: 584761
End: 585204
Strand: Reverse
Name: 123965888
Synonym: P9515_06531
Alternate gene names: NA
Gene position: 585204-584761 (Counterclockwise)
Preceding gene: 123965893
Following gene: 123965887
Centisome position: 34.34
GC content: 29.5
Gene sequence:
>444_bases ATGTCTTTTTATGAACTATTAGAGAATACACCTAAGATATTTGGATTCTTTGGAATATTTCTTTTTCTTGGTACTTTGAT TTCATTTATTTTTAATTTTGGCTTTAAATTCAGAATTACAGGAGCAACTATCTTTTCATTATTACTTTCCTTAAGCAGTT GGGCTTTTATACAAAGCTATACAGAAAATATAAAAATAGAAGGAGCTAAATATGTTCCAATTGTTTATGATAACGGATTT GATTTAATTGTTACCAAAGCTGATAATGAATTTCCAGAAGAAGCCATTGAGCCCACATTAAAACAATTATCTGCAAACCT TAAAAAGGGTAGTAGATCCGGCTCAACCGTTAAAATTAAACTTAGGAAACTTGAGAAGATCTCAAATGATGTTAGTAAGC CAGTAATTATTGGGGAGATAGAAAAAATCTTTACGATGAATTAG
Upstream 100 bases:
>100_bases ATTTTTTATTAAAATTTAGAGATCTAATTCTTTTCAAGTTAGAATCCTAAATAGAGTAGTCTTACAAAATATAAGAAATT AATGAGGTCAAAGCCAGTAA
Downstream 100 bases:
>100_bases TTATTAAATGATTGAAGAGAAATTTTTAGAAGTTTTACCTGATAACTTCAGACATGAAAAATCTTTTTTAATTAAAAAGA AACTAAATGATTTTAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSFYELLENTPKIFGFFGIFLFLGTLISFIFNFGFKFRITGATIFSLLLSLSSWAFIQSYTENIKIEGAKYVPIVYDNGF DLIVTKADNEFPEEAIEPTLKQLSANLKKGSRSGSTVKIKLRKLEKISNDVSKPVIIGEIEKIFTMN
Sequences:
>Translated_147_residues MSFYELLENTPKIFGFFGIFLFLGTLISFIFNFGFKFRITGATIFSLLLSLSSWAFIQSYTENIKIEGAKYVPIVYDNGF DLIVTKADNEFPEEAIEPTLKQLSANLKKGSRSGSTVKIKLRKLEKISNDVSKPVIIGEIEKIFTMN >Mature_146_residues SFYELLENTPKIFGFFGIFLFLGTLISFIFNFGFKFRITGATIFSLLLSLSSWAFIQSYTENIKIEGAKYVPIVYDNGFD LIVTKADNEFPEEAIEPTLKQLSANLKKGSRSGSTVKIKLRKLEKISNDVSKPVIIGEIEKIFTMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16641; Mature: 16509
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYELLENTPKIFGFFGIFLFLGTLISFIFNFGFKFRITGATIFSLLLSLSSWAFIQSY CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHH TENIKIEGAKYVPIVYDNGFDLIVTKADNEFPEEAIEPTLKQLSANLKKGSRSGSTVKIK HHCEEECCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEH LRKLEKISNDVSKPVIIGEIEKIFTMN HHHHHHHHHHCCCCEEEECHHHHHCCC >Mature Secondary Structure SFYELLENTPKIFGFFGIFLFLGTLISFIFNFGFKFRITGATIFSLLLSLSSWAFIQSY CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHH TENIKIEGAKYVPIVYDNGFDLIVTKADNEFPEEAIEPTLKQLSANLKKGSRSGSTVKIK HHCEEECCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEH LRKLEKISNDVSKPVIIGEIEKIFTMN HHHHHHHHHHCCCCEEEECHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA