| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965887
Identifier: 123965887
GI number: 123965887
Start: 584346
End: 584753
Strand: Reverse
Name: 123965887
Synonym: P9515_06521
Alternate gene names: NA
Gene position: 584753-584346 (Counterclockwise)
Preceding gene: 123965888
Following gene: 123965886
Centisome position: 34.31
GC content: 26.47
Gene sequence:
>408_bases ATGATTGAAGAGAAATTTTTAGAAGTTTTACCTGATAACTTCAGACATGAAAAATCTTTTTTAATTAAAAAGAAACTAAA TGATTTTAAAAAATTAAGTCAGCTTAGTGATTCAGAATTGAATATTATTCAAAATTCATACTCATTATGTACTCTAAATA ATTTAAGAAAAATAAGAGCTATTGCTAATTTCAAAAGTGAGCTTTCAATAAATCCATATGAATCTTACTTACTACTACAC TGCGGGGTAGGTTCTATCAAATCACTTTCAATTTTGAACCCATATGATCTTAAGGAGAGAATTGGAAGATTGGAGAGAAG TCTTAGAACTCAAACTCAAACAAATATAACTCTATCTACTTTAAAAGATTGGATAAAAAGAGCTAATCAAATCTGTAAAT CCATTTAA
Upstream 100 bases:
>100_bases AAAATTAAACTTAGGAAACTTGAGAAGATCTCAAATGATGTTAGTAAGCCAGTAATTATTGGGGAGATAGAAAAAATCTT TACGATGAATTAGTTATTAA
Downstream 100 bases:
>100_bases AATTTTGATTAAAAAAATTTTTTAATGTAGAATTTGGCAAAGATCATAAATAAATGAATAACTTTCTTTTATTAGTATTT TTATCTCTATCCTATATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MIEEKFLEVLPDNFRHEKSFLIKKKLNDFKKLSQLSDSELNIIQNSYSLCTLNNLRKIRAIANFKSELSINPYESYLLLH CGVGSIKSLSILNPYDLKERIGRLERSLRTQTQTNITLSTLKDWIKRANQICKSI
Sequences:
>Translated_135_residues MIEEKFLEVLPDNFRHEKSFLIKKKLNDFKKLSQLSDSELNIIQNSYSLCTLNNLRKIRAIANFKSELSINPYESYLLLH CGVGSIKSLSILNPYDLKERIGRLERSLRTQTQTNITLSTLKDWIKRANQICKSI >Mature_135_residues MIEEKFLEVLPDNFRHEKSFLIKKKLNDFKKLSQLSDSELNIIQNSYSLCTLNNLRKIRAIANFKSELSINPYESYLLLH CGVGSIKSLSILNPYDLKERIGRLERSLRTQTQTNITLSTLKDWIKRANQICKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15733; Mature: 15733
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEEKFLEVLPDNFRHEKSFLIKKKLNDFKKLSQLSDSELNIIQNSYSLCTLNNLRKIRA CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHH IANFKSELSINPYESYLLLHCGVGSIKSLSILNPYDLKERIGRLERSLRTQTQTNITLST HHHHHHHCCCCHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEHHH LKDWIKRANQICKSI HHHHHHHHHHHHHCC >Mature Secondary Structure MIEEKFLEVLPDNFRHEKSFLIKKKLNDFKKLSQLSDSELNIIQNSYSLCTLNNLRKIRA CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHH IANFKSELSINPYESYLLLHCGVGSIKSLSILNPYDLKERIGRLERSLRTQTQTNITLST HHHHHHHCCCCHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEHHH LKDWIKRANQICKSI HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA