| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965863
Identifier: 123965863
GI number: 123965863
Start: 561427
End: 562080
Strand: Reverse
Name: 123965863
Synonym: P9515_06281
Alternate gene names: NA
Gene position: 562080-561427 (Counterclockwise)
Preceding gene: 123965865
Following gene: 123965862
Centisome position: 32.98
GC content: 29.82
Gene sequence:
>654_bases ATGAAAACATATGGAGTTTTATTGGACAAGGCACTGCTAATTGTGATGGCTAAGTGGCATGCTTATGGTCGTTGTAAAAC TAGATTATCAAAAGATATAGGTAAATTTTGTTCTGCAAATGTGCAAAGAAAAATGACAGAACATACAGTTTCTGTTGCTA AAGCTATAGAAAACAAAGGTTTAATAGATATTTCCTTAGCCATCTCTGGTCTTGGATTCAAAAAGAGTAAAAGATGGTCT AATGAGTTAGGAGTTAGAAACTTTAATTTACAAGGGAAAGGATGCTTAGGAGAAAAGATGAGAAGACAAATTCTTATAAA TAAAAAATTCAACCTAACAAAAACACGAAATATTATTTTTATAGGGACTGATCTTCCAGATTTTTGTCATTTGGATTTAT TAAATGCCCTTACAAAACTAAAAAAAAATGATCTTATTTTAGGCCCATCAAATGACGGGGGATATTGGCTAATTGCTTTT TCAGAAAGATTATTATCAACTGATTTATATTTACCTTTTATAAACATTAAATGGAGTAGCGAAGATGTCCTTAAACAAAC CATAGATAACTTCAATCAAGTTGCCATAACACACGACTTTCTTCATAGAAAAATTGATATTGATACAATAATTGATATAA AAAAAAGGGAATAA
Upstream 100 bases:
>100_bases AAATCGCAAGATCACGATAAATTTAAAATTTATTAACAATGCGCATTATAAAAAAATTTTTTTAATTACAAATTCTAACC ATTGTCTAAACCTTATAATA
Downstream 100 bases:
>100_bases TTAACTTGCCTAAAATCTCAATAATTATTCCTACGTATAATGAATCTCAACATTTATCATTACTTCTTTCAGATTTATCA ATATTCAATGAGGGAATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKTYGVLLDKALLIVMAKWHAYGRCKTRLSKDIGKFCSANVQRKMTEHTVSVAKAIENKGLIDISLAISGLGFKKSKRWS NELGVRNFNLQGKGCLGEKMRRQILINKKFNLTKTRNIIFIGTDLPDFCHLDLLNALTKLKKNDLILGPSNDGGYWLIAF SERLLSTDLYLPFINIKWSSEDVLKQTIDNFNQVAITHDFLHRKIDIDTIIDIKKRE
Sequences:
>Translated_217_residues MKTYGVLLDKALLIVMAKWHAYGRCKTRLSKDIGKFCSANVQRKMTEHTVSVAKAIENKGLIDISLAISGLGFKKSKRWS NELGVRNFNLQGKGCLGEKMRRQILINKKFNLTKTRNIIFIGTDLPDFCHLDLLNALTKLKKNDLILGPSNDGGYWLIAF SERLLSTDLYLPFINIKWSSEDVLKQTIDNFNQVAITHDFLHRKIDIDTIIDIKKRE >Mature_217_residues MKTYGVLLDKALLIVMAKWHAYGRCKTRLSKDIGKFCSANVQRKMTEHTVSVAKAIENKGLIDISLAISGLGFKKSKRWS NELGVRNFNLQGKGCLGEKMRRQILINKKFNLTKTRNIIFIGTDLPDFCHLDLLNALTKLKKNDLILGPSNDGGYWLIAF SERLLSTDLYLPFINIKWSSEDVLKQTIDNFNQVAITHDFLHRKIDIDTIIDIKKRE
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24811; Mature: 24811
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYGVLLDKALLIVMAKWHAYGRCKTRLSKDIGKFCSANVQRKMTEHTVSVAKAIENKG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC LIDISLAISGLGFKKSKRWSNELGVRNFNLQGKGCLGEKMRRQILINKKFNLTKTRNIIF EEEEEEEEECCCCCCCCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEECEEEE IGTDLPDFCHLDLLNALTKLKKNDLILGPSNDGGYWLIAFSERLLSTDLYLPFINIKWSS EECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECHHHHHCCEEEEEEEEEECC EDVLKQTIDNFNQVAITHDFLHRKIDIDTIIDIKKRE HHHHHHHHHCHHEEEEEHHHHHHCCCHHHEEEEECCC >Mature Secondary Structure MKTYGVLLDKALLIVMAKWHAYGRCKTRLSKDIGKFCSANVQRKMTEHTVSVAKAIENKG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC LIDISLAISGLGFKKSKRWSNELGVRNFNLQGKGCLGEKMRRQILINKKFNLTKTRNIIF EEEEEEEEECCCCCCCCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEECEEEE IGTDLPDFCHLDLLNALTKLKKNDLILGPSNDGGYWLIAFSERLLSTDLYLPFINIKWSS EECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECHHHHHCCEEEEEEEEEECC EDVLKQTIDNFNQVAITHDFLHRKIDIDTIIDIKKRE HHHHHHHHHCHHEEEEEHHHHHHCCCHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA