| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965865
Identifier: 123965865
GI number: 123965865
Start: 563622
End: 564860
Strand: Reverse
Name: 123965865
Synonym: P9515_06301
Alternate gene names: NA
Gene position: 564860-563622 (Counterclockwise)
Preceding gene: 123965867
Following gene: 123965863
Centisome position: 33.15
GC content: 30.59
Gene sequence:
>1239_bases ATGAATAAAGTTTTGAGTTGGGCAGATTTAAGTAAATTTGAAATTGATGATATTGATAGAGTTAATGGGATAAATAATTC TTACTCTAATTTAAGATTATTTGGTCATAGTGAAAAAGAAGTTGATCTTACTTTATTTAGAGATAGACATTCATGGTGCC CCTACTGCCAAAAGATATGGTTATGGCTTGAATTTAAGAGGATTCCATACAAAGTTAAAAAAATAAATATGTATTGTTAT GGTCAAAAAGAAAAATGGTATCTCAACAAAGTAAGTTCAGGTAAATTACCTGCAATAGACTTGAATGGGGAAATAATAAC AGAAAGTGATAACATCATATCTCTTTTAGAAAATGAATATGGAACACTTGGTTCATCGCTCCTTTCAAATGATATTCGTG AAGCAAGAATTTTAGAAAGAGAAATTTTTAGATCATGGTGTAATTGGCTTTGCAGAAAAAGCTTTAGTTATCTAGATGAA TCCTTTAGTAAAAATAAATTTAAGGAATCTATTCAAAAATTTGAAAAAATATTAAGTTCATCCAAAACAGGATTCATTGA TTCACAAATAAATGATTCAGATAAAATAGAGCCAGGGACTGGAGATATTATTTTTATTCCCTATATAGAAAGAATGAACG CTTCTCTAAGCTATTACAAAGGATTCAATTTAAGGAATAATTACCCTCACATTGATAGATGGCTTTCTCTCCTCGAAAAT CTGTCTCCCTATAGAGGTACTCAAGGGGATTTTCATACACATTCTCATGATCTACCTCCTCAAATGGGCGGCTGCTTTAA GGATGTTAATGATCAACAAATTTTATTATCTAATCTAATAGATGTTGGAGAAGGGCTTGGGAAATCAGAATTTAATCAGG CTGTTGACTTAGATTATTACGCTAAATTTGCCCTCAAAAGAGTCTTGAAACATAAAGATAATATTATCAATGCAAATCCT TATGAAAAAGACTTATTTGATCAATCATTAAGATCTGCTCTTACATATATGATTACCTCTGAAATTAATAAAGTTCCTGA CAAAGCTGTCATGTCTATCAACTACCTAAAAAATAGAATTTCAGTCCCAAGAGACATGCCTGTCATTTCTGCAAGATTAT TGAGGCAATCATTAAATAAAATAGGGTCACCTAATGTTAATTCCAAAACTGATAAGATTCCAGTTACACATCGATATGAT CAAGACCCTTCGAAATTCAAATTAAATCAAAGATCATAA
Upstream 100 bases:
>100_bases ACCGCCGGAACCAGCGCCAACAACAATTAAATCAAATTCAAATTCCAAAATCTTTTTAAAACATATATTATATCCTTATA ACGAAGTCTAATATCAAATA
Downstream 100 bases:
>100_bases ATTTTTTCTTGAATCAATTTGAAGAAGATCTTTTATTTTTTGAACTTGACTTGCAACATTTGGATCACTTGACAATTTTT TTTCCACTTGCTCGATAGCA
Product: glutathione S-transferase
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase-Like Protein; Glutaredoxin-Like Domain-Containing Protein; Glutaredoxin; Glutathione S-Transferase N-Terminal Domain Protein
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MNKVLSWADLSKFEIDDIDRVNGINNSYSNLRLFGHSEKEVDLTLFRDRHSWCPYCQKIWLWLEFKRIPYKVKKINMYCY GQKEKWYLNKVSSGKLPAIDLNGEIITESDNIISLLENEYGTLGSSLLSNDIREARILEREIFRSWCNWLCRKSFSYLDE SFSKNKFKESIQKFEKILSSSKTGFIDSQINDSDKIEPGTGDIIFIPYIERMNASLSYYKGFNLRNNYPHIDRWLSLLEN LSPYRGTQGDFHTHSHDLPPQMGGCFKDVNDQQILLSNLIDVGEGLGKSEFNQAVDLDYYAKFALKRVLKHKDNIINANP YEKDLFDQSLRSALTYMITSEINKVPDKAVMSINYLKNRISVPRDMPVISARLLRQSLNKIGSPNVNSKTDKIPVTHRYD QDPSKFKLNQRS
Sequences:
>Translated_412_residues MNKVLSWADLSKFEIDDIDRVNGINNSYSNLRLFGHSEKEVDLTLFRDRHSWCPYCQKIWLWLEFKRIPYKVKKINMYCY GQKEKWYLNKVSSGKLPAIDLNGEIITESDNIISLLENEYGTLGSSLLSNDIREARILEREIFRSWCNWLCRKSFSYLDE SFSKNKFKESIQKFEKILSSSKTGFIDSQINDSDKIEPGTGDIIFIPYIERMNASLSYYKGFNLRNNYPHIDRWLSLLEN LSPYRGTQGDFHTHSHDLPPQMGGCFKDVNDQQILLSNLIDVGEGLGKSEFNQAVDLDYYAKFALKRVLKHKDNIINANP YEKDLFDQSLRSALTYMITSEINKVPDKAVMSINYLKNRISVPRDMPVISARLLRQSLNKIGSPNVNSKTDKIPVTHRYD QDPSKFKLNQRS >Mature_412_residues MNKVLSWADLSKFEIDDIDRVNGINNSYSNLRLFGHSEKEVDLTLFRDRHSWCPYCQKIWLWLEFKRIPYKVKKINMYCY GQKEKWYLNKVSSGKLPAIDLNGEIITESDNIISLLENEYGTLGSSLLSNDIREARILEREIFRSWCNWLCRKSFSYLDE SFSKNKFKESIQKFEKILSSSKTGFIDSQINDSDKIEPGTGDIIFIPYIERMNASLSYYKGFNLRNNYPHIDRWLSLLEN LSPYRGTQGDFHTHSHDLPPQMGGCFKDVNDQQILLSNLIDVGEGLGKSEFNQAVDLDYYAKFALKRVLKHKDNIINANP YEKDLFDQSLRSALTYMITSEINKVPDKAVMSINYLKNRISVPRDMPVISARLLRQSLNKIGSPNVNSKTDKIPVTHRYD QDPSKFKLNQRS
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI25144449, Length=196, Percent_Identity=23.469387755102, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47942; Mature: 47942
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVLSWADLSKFEIDDIDRVNGINNSYSNLRLFGHSEKEVDLTLFRDRHSWCPYCQKIW CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHH LWLEFKRIPYKVKKINMYCYGQKEKWYLNKVSSGKLPAIDLNGEIITESDNIISLLENEY HHHHHHHCCEEEEEEEEEEECCCCCEEEECCCCCCCCEEECCCEEEECCCHHHHHHHHHH GTLGSSLLSNDIREARILEREIFRSWCNWLCRKSFSYLDESFSKNKFKESIQKFEKILSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SKTGFIDSQINDSDKIEPGTGDIIFIPYIERMNASLSYYKGFNLRNNYPHIDRWLSLLEN CCCCCCCCCCCCCCCCCCCCCCEEEEECHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHC LSPYRGTQGDFHTHSHDLPPQMGGCFKDVNDQQILLSNLIDVGEGLGKSEFNQAVDLDYY CCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHH AKFALKRVLKHKDNIINANPYEKDLFDQSLRSALTYMITSEINKVPDKAVMSINYLKNRI HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SVPRDMPVISARLLRQSLNKIGSPNVNSKTDKIPVTHRYDQDPSKFKLNQRS CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MNKVLSWADLSKFEIDDIDRVNGINNSYSNLRLFGHSEKEVDLTLFRDRHSWCPYCQKIW CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHH LWLEFKRIPYKVKKINMYCYGQKEKWYLNKVSSGKLPAIDLNGEIITESDNIISLLENEY HHHHHHHCCEEEEEEEEEEECCCCCEEEECCCCCCCCEEECCCEEEECCCHHHHHHHHHH GTLGSSLLSNDIREARILEREIFRSWCNWLCRKSFSYLDESFSKNKFKESIQKFEKILSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SKTGFIDSQINDSDKIEPGTGDIIFIPYIERMNASLSYYKGFNLRNNYPHIDRWLSLLEN CCCCCCCCCCCCCCCCCCCCCCEEEEECHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHC LSPYRGTQGDFHTHSHDLPPQMGGCFKDVNDQQILLSNLIDVGEGLGKSEFNQAVDLDYY CCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHH AKFALKRVLKHKDNIINANPYEKDLFDQSLRSALTYMITSEINKVPDKAVMSINYLKNRI HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SVPRDMPVISARLLRQSLNKIGSPNVNSKTDKIPVTHRYDQDPSKFKLNQRS CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA