| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is folE [H]
Identifier: 123965835
GI number: 123965835
Start: 537838
End: 538584
Strand: Direct
Name: folE [H]
Synonym: P9515_06001
Alternate gene names: 123965835
Gene position: 537838-538584 (Clockwise)
Preceding gene: 123965834
Following gene: 123965837
Centisome position: 31.56
GC content: 33.2
Gene sequence:
>747_bases ATGACCTCTACAGTACCTAACGATAATCTTAAGGAGAATTTAGGCGATCAAATAAGCAATAAATTAGTTTCTGAAATAAT CAGAAATAGAATTAAGGTTAATAAAAAAAGATTCCATGCTAACGACAACATCTCAGATTTCATAAATCCAGGAGAATTAG ATATTCTACAAAAGGAGGTGGCCTCAAAAGTTAAGGATTTATTAAAGTCTTTAGTAATTGATATTGATAATGATCATAAC TCTCAAGAGACTGCTGAAAGAGTCGCAAAAATGTATTTGAAAGAAGTTTTTAAAGGTCGTTATCAAAAAAGACCTGATGT CACTGACTTCCCTAATGCAAAGAAATTAGATGAGATATACACTCTTGGTCCAATAAGTGTACGCTCTGCTTGTTCTCATC ATATGGTGCCTATTATTGGTGATTGCTGGATTGGGATTAAGCCTGGAGATAAAGTTATAGGAATTTCAAAATTTTCTAGA GTTGCTGATTGGGTTTTTTCTAGACCACATATTCAAGAGGAAGCTGTCATGATTCTTGCAGATGAAATTGAACGTTTATG TGAACCAAAAGGTTTAGCAATTCTTGTTAAAGCTAAACATTATTGCATGTGTTGGAGGGGAGTAAAGGAACCTAATACAA GTATGATTAATTCCATTGTAAGAGGGGACTTTAGACATGATATAAGCCTAAAACAGGAATTCTTTGAGTTAGTTAAACAA CAACCAAATGCGTTATCTTGTTATTAG
Upstream 100 bases:
>100_bases ACACCCTAATGAACATTGAGATGTGATATAGTGTTTAGGCAATTTAACTAAAAGTAGATAAAGTAATTAAGTTTGCAGAC TATTTTCTGATAACATTTCT
Downstream 100 bases:
>100_bases ATTAGCGAGAAGTTATTTTTTATAGTTGTTTGATATTAATTATTTAAGAAATAGATTATTTATTTATTTCTCTAATTATA TTTTTTGTTTTTTCTAAATC
Product: putative GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTSTVPNDNLKENLGDQISNKLVSEIIRNRIKVNKKRFHANDNISDFINPGELDILQKEVASKVKDLLKSLVIDIDNDHN SQETAERVAKMYLKEVFKGRYQKRPDVTDFPNAKKLDEIYTLGPISVRSACSHHMVPIIGDCWIGIKPGDKVIGISKFSR VADWVFSRPHIQEEAVMILADEIERLCEPKGLAILVKAKHYCMCWRGVKEPNTSMINSIVRGDFRHDISLKQEFFELVKQ QPNALSCY
Sequences:
>Translated_248_residues MTSTVPNDNLKENLGDQISNKLVSEIIRNRIKVNKKRFHANDNISDFINPGELDILQKEVASKVKDLLKSLVIDIDNDHN SQETAERVAKMYLKEVFKGRYQKRPDVTDFPNAKKLDEIYTLGPISVRSACSHHMVPIIGDCWIGIKPGDKVIGISKFSR VADWVFSRPHIQEEAVMILADEIERLCEPKGLAILVKAKHYCMCWRGVKEPNTSMINSIVRGDFRHDISLKQEFFELVKQ QPNALSCY >Mature_247_residues TSTVPNDNLKENLGDQISNKLVSEIIRNRIKVNKKRFHANDNISDFINPGELDILQKEVASKVKDLLKSLVIDIDNDHNS QETAERVAKMYLKEVFKGRYQKRPDVTDFPNAKKLDEIYTLGPISVRSACSHHMVPIIGDCWIGIKPGDKVIGISKFSRV ADWVFSRPHIQEEAVMILADEIERLCEPKGLAILVKAKHYCMCWRGVKEPNTSMINSIVRGDFRHDISLKQEFFELVKQQ PNALSCY
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=123, Percent_Identity=34.1463414634146, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI4503949, Length=123, Percent_Identity=34.1463414634146, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1788476, Length=183, Percent_Identity=30.0546448087432, Blast_Score=107, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=30.8988764044944, Blast_Score=97, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6321706, Length=185, Percent_Identity=29.7297297297297, Blast_Score=91, Evalue=1e-19, Organism=Drosophila melanogaster, GI24656782, Length=157, Percent_Identity=33.7579617834395, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24656796, Length=157, Percent_Identity=33.7579617834395, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24656791, Length=157, Percent_Identity=33.7579617834395, Blast_Score=82, Evalue=3e-16,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 28336; Mature: 28205
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTVPNDNLKENLGDQISNKLVSEIIRNRIKVNKKRFHANDNISDFINPGELDILQKEV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHH ASKVKDLLKSLVIDIDNDHNSQETAERVAKMYLKEVFKGRYQKRPDVTDFPNAKKLDEIY HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH TLGPISVRSACSHHMVPIIGDCWIGIKPGDKVIGISKFSRVADWVFSRPHIQEEAVMILA CCCCHHHHHHHHCCCCCCCCCCEEECCCCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHH DEIERLCEPKGLAILVKAKHYCMCWRGVKEPNTSMINSIVRGDFRHDISLKQEFFELVKQ HHHHHHCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC QPNALSCY CCCCCCCC >Mature Secondary Structure TSTVPNDNLKENLGDQISNKLVSEIIRNRIKVNKKRFHANDNISDFINPGELDILQKEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHH ASKVKDLLKSLVIDIDNDHNSQETAERVAKMYLKEVFKGRYQKRPDVTDFPNAKKLDEIY HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH TLGPISVRSACSHHMVPIIGDCWIGIKPGDKVIGISKFSRVADWVFSRPHIQEEAVMILA CCCCHHHHHHHHCCCCCCCCCCEEECCCCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHH DEIERLCEPKGLAILVKAKHYCMCWRGVKEPNTSMINSIVRGDFRHDISLKQEFFELVKQ HHHHHHCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC QPNALSCY CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA