| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is ilvB [H]
Identifier: 123965825
GI number: 123965825
Start: 528016
End: 529779
Strand: Direct
Name: ilvB [H]
Synonym: P9515_05901
Alternate gene names: 123965825
Gene position: 528016-529779 (Clockwise)
Preceding gene: 123965824
Following gene: 123965826
Centisome position: 30.98
GC content: 37.47
Gene sequence:
>1764_bases GTGACTCTTACTTCTCCACCTTTGTCAAAAGGTGATTCAGAAAAAAAATACCCAAAATGGATTACAGGTGCAGAAGCACT TATGGATTCACTAAGAATCCATGGTGTGAGAGTTATATTTGGATATCCCGGAGGAGCTATACTCCCAATTTATGATGCTG TATATAAGGCAGAGAGTGATGGATGGTTGAAACACTATATGGTTAGACATGAGCAGGGAGGTTCCCATGCCGCAGATGGG TATGCGAGAGCAACTGGTGAGGTAGGAGTATGTTTTGGAACTTCAGGCCCAGGAGCTACGAATTTAGTAACGGGAATTGC AACAGCTCAGATGGATTCAGTCCCATTGGTGGTGGTCACTGGCCAAGTTCCAAGACCTGCTATCGGAACAGATGCTTTTC AAGAGACTGATATTTTTGGGATAACACTTCCTATCGTTAAACATTCATGGGTAATTAGAGATCCTTCAGATATAGCGAAA GTAGTTTCAGAAGCTTTTTTCATTGCATCCTCAGGAAGACCCGGCCCAGTTTTAATTGACATACCAAAAGATGTGGGTCA AGAATTCTTTAATTATGAAAGAATTTTACCAGGTGAAATTATTCCTAAAGGTTTTAAAAGGAATGGTGAAATTAATGATA ATGATATCGATAAAGCAATTGAATTAATTAAACAGTCTGCAAAACCTTTGCTCTATGTGGGTGGTGGTGCTATATCTTCT GGGGCTCATAAGGAAGTGGAAATACTAGCAAAGAATTTTCAAATTCCTGTCACAACTACTTTAATGGGGAAGGGAGCTTT TGATGAAAGGGATGATTTATCTGTGGGAATGTTGGGTATGCATGGAACTGCATATGCAAATTTTGCAGTAACTGAATGCG ATCTTTTGATTACTGTTGGAGCGAGATTTGATGATAGAGTCACTGGCAAATTAGATACATTTGCTCCATCTGCAAAAGTT ATTCATATCGATATTGATCCCGCAGAAGTTAATAAAAATAGACGTGTTGATGTTGCAATCGTTTCTGATGTGGCTGTAGC TCTTTCAAAAATCAATGAAAAATCTTTAAGTAAAAATACTTCGTGTAATACTAGAAATTGGTTAGAAAAAATAAATTCTT GGAAAAATAAACATCCTTTATTTATTCCTCCTGAAGAAGGAGAAATTTACCCTCAAGAAGTACTTTTAAAAGTTAGAGAT TTGTCCCCTGAAGCTTTCATTACAACAGATGTAGGTCAACATCAAATGTGGGCTGCGCAGTATCTCAGAAATGCCCCAAG AAGGTGGATTAGTAGTGCAGGCTTAGGAACAATGGGCTTTGGATTACCTGCCGCAATGGGAGTAAAAGCTGCATTACCAA CATCTGAAGTTATTTGTATAGCTGGTGATGCAAGTGTTTTGATGAATATACAAGAATTGGGTACTTTATCTCAATATGGT CTAAAAATTAAATTAGTTATAATAAATAATCGCTGGCAAGGAATGGTTAGACAATGGCAAGAAAGCTTTTATCATGAAAG GTATTCTTCTTCCGATATGAGTTGTGGAGAACCAGATTTCGTTAAGCTAGCAGAATCCTTTGGAGTTAAGGGATTTTTAA TCTCCGAGAGAAAACAATTACATAATGAATTTAAGTCTGCTTTAGATTTTGATGGTCCAGCCTTAATTAATGTTCGAGTT AGGAGGGGAGAAAATTGTTATCCAATGGTTCCCCCAGGTAAAAGTAATGCTCAAATGGTTGGTTACGTTAACTGTAAAAA CTAA
Upstream 100 bases:
>100_bases TTAAAAATATTTAATTTAGAAGTGGTTCCTGACATTACGTTTCTAAATTAGGCAAAATTTTTTAATTAAGTTTAAGATTT ATATAGAATTATTTTTCTTA
Downstream 100 bases:
>100_bases TTATTGTTTTTGGATAAAATTAACAACTTATAATAAAAATAAATTATTGAGTTTACCTTAATTGAAAAAAGTTATATCGA TATTAATAATTTTTGTTTTG
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MTLTSPPLSKGDSEKKYPKWITGAEALMDSLRIHGVRVIFGYPGGAILPIYDAVYKAESDGWLKHYMVRHEQGGSHAADG YARATGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVTGQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRDPSDIAK VVSEAFFIASSGRPGPVLIDIPKDVGQEFFNYERILPGEIIPKGFKRNGEINDNDIDKAIELIKQSAKPLLYVGGGAISS GAHKEVEILAKNFQIPVTTTLMGKGAFDERDDLSVGMLGMHGTAYANFAVTECDLLITVGARFDDRVTGKLDTFAPSAKV IHIDIDPAEVNKNRRVDVAIVSDVAVALSKINEKSLSKNTSCNTRNWLEKINSWKNKHPLFIPPEEGEIYPQEVLLKVRD LSPEAFITTDVGQHQMWAAQYLRNAPRRWISSAGLGTMGFGLPAAMGVKAALPTSEVICIAGDASVLMNIQELGTLSQYG LKIKLVIINNRWQGMVRQWQESFYHERYSSSDMSCGEPDFVKLAESFGVKGFLISERKQLHNEFKSALDFDGPALINVRV RRGENCYPMVPPGKSNAQMVGYVNCKN
Sequences:
>Translated_587_residues MTLTSPPLSKGDSEKKYPKWITGAEALMDSLRIHGVRVIFGYPGGAILPIYDAVYKAESDGWLKHYMVRHEQGGSHAADG YARATGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVTGQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRDPSDIAK VVSEAFFIASSGRPGPVLIDIPKDVGQEFFNYERILPGEIIPKGFKRNGEINDNDIDKAIELIKQSAKPLLYVGGGAISS GAHKEVEILAKNFQIPVTTTLMGKGAFDERDDLSVGMLGMHGTAYANFAVTECDLLITVGARFDDRVTGKLDTFAPSAKV IHIDIDPAEVNKNRRVDVAIVSDVAVALSKINEKSLSKNTSCNTRNWLEKINSWKNKHPLFIPPEEGEIYPQEVLLKVRD LSPEAFITTDVGQHQMWAAQYLRNAPRRWISSAGLGTMGFGLPAAMGVKAALPTSEVICIAGDASVLMNIQELGTLSQYG LKIKLVIINNRWQGMVRQWQESFYHERYSSSDMSCGEPDFVKLAESFGVKGFLISERKQLHNEFKSALDFDGPALINVRV RRGENCYPMVPPGKSNAQMVGYVNCKN >Mature_586_residues TLTSPPLSKGDSEKKYPKWITGAEALMDSLRIHGVRVIFGYPGGAILPIYDAVYKAESDGWLKHYMVRHEQGGSHAADGY ARATGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVTGQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRDPSDIAKV VSEAFFIASSGRPGPVLIDIPKDVGQEFFNYERILPGEIIPKGFKRNGEINDNDIDKAIELIKQSAKPLLYVGGGAISSG AHKEVEILAKNFQIPVTTTLMGKGAFDERDDLSVGMLGMHGTAYANFAVTECDLLITVGARFDDRVTGKLDTFAPSAKVI HIDIDPAEVNKNRRVDVAIVSDVAVALSKINEKSLSKNTSCNTRNWLEKINSWKNKHPLFIPPEEGEIYPQEVLLKVRDL SPEAFITTDVGQHQMWAAQYLRNAPRRWISSAGLGTMGFGLPAAMGVKAALPTSEVICIAGDASVLMNIQELGTLSQYGL KIKLVIINNRWQGMVRQWQESFYHERYSSSDMSCGEPDFVKLAESFGVKGFLISERKQLHNEFKSALDFDGPALINVRVR RGENCYPMVPPGKSNAQMVGYVNCKN
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=571, Percent_Identity=25.2189141856392, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI21361361, Length=592, Percent_Identity=24.3243243243243, Blast_Score=148, Evalue=1e-35, Organism=Escherichia coli, GI87081685, Length=558, Percent_Identity=44.9820788530466, Blast_Score=486, Evalue=1e-138, Organism=Escherichia coli, GI1790104, Length=565, Percent_Identity=42.3008849557522, Blast_Score=450, Evalue=1e-127, Organism=Escherichia coli, GI1786717, Length=570, Percent_Identity=31.7543859649123, Blast_Score=285, Evalue=5e-78, Organism=Escherichia coli, GI1787096, Length=557, Percent_Identity=26.3913824057451, Blast_Score=189, Evalue=3e-49, Organism=Escherichia coli, GI1788716, Length=558, Percent_Identity=23.8351254480287, Blast_Score=142, Evalue=7e-35, Organism=Caenorhabditis elegans, GI17542570, Length=604, Percent_Identity=26.158940397351, Blast_Score=139, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17531301, Length=570, Percent_Identity=25.4385964912281, Blast_Score=128, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17531299, Length=565, Percent_Identity=25.3097345132743, Blast_Score=128, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6323755, Length=586, Percent_Identity=42.320819112628, Blast_Score=430, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6320816, Length=572, Percent_Identity=23.0769230769231, Blast_Score=101, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6321524, Length=511, Percent_Identity=24.26614481409, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI19922626, Length=573, Percent_Identity=25.3054101221641, Blast_Score=166, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64133; Mature: 64002
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTSPPLSKGDSEKKYPKWITGAEALMDSLRIHGVRVIFGYPGGAILPIYDAVYKAESD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCEEHHHHHHHHCCCC GWLKHYMVRHEQGGSHAADGYARATGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVT CHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE GQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRDPSDIAKVVSEAFFIASSGRPGPVLID CCCCCCCCCCCCCCCCCEEEEEEEHHCCEEEEECHHHHHHHHHHHEEEECCCCCCCEEEE IPKDVGQEFFNYERILPGEIIPKGFKRNGEINDNDIDKAIELIKQSAKPLLYVGGGAISS CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC GAHKEVEILAKNFQIPVTTTLMGKGAFDERDDLSVGMLGMHGTAYANFAVTECDLLITVG CCCHHHHEEHHCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEEEEC ARFDDRVTGKLDTFAPSAKVIHIDIDPAEVNKNRRVDVAIVSDVAVALSKINEKSLSKNT CCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCC SCNTRNWLEKINSWKNKHPLFIPPEEGEIYPQEVLLKVRDLSPEAFITTDVGQHQMWAAQ CCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHH YLRNAPRRWISSAGLGTMGFGLPAAMGVKAALPTSEVICIAGDASVLMNIQELGTLSQYG HHHHCHHHHHHHCCCCCCCCCCHHHHCCEECCCCCCEEEEECCHHHHHHHHHHCCHHHCC LKIKLVIINNRWQGMVRQWQESFYHERYSSSDMSCGEPDFVKLAESFGVKGFLISERKQL EEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHH HNEFKSALDFDGPALINVRVRRGENCYPMVPPGKSNAQMVGYVNCKN HHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure TLTSPPLSKGDSEKKYPKWITGAEALMDSLRIHGVRVIFGYPGGAILPIYDAVYKAESD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCEEHHHHHHHHCCCC GWLKHYMVRHEQGGSHAADGYARATGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVT CHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE GQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRDPSDIAKVVSEAFFIASSGRPGPVLID CCCCCCCCCCCCCCCCCEEEEEEEHHCCEEEEECHHHHHHHHHHHEEEECCCCCCCEEEE IPKDVGQEFFNYERILPGEIIPKGFKRNGEINDNDIDKAIELIKQSAKPLLYVGGGAISS CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC GAHKEVEILAKNFQIPVTTTLMGKGAFDERDDLSVGMLGMHGTAYANFAVTECDLLITVG CCCHHHHEEHHCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEEEEC ARFDDRVTGKLDTFAPSAKVIHIDIDPAEVNKNRRVDVAIVSDVAVALSKINEKSLSKNT CCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCC SCNTRNWLEKINSWKNKHPLFIPPEEGEIYPQEVLLKVRDLSPEAFITTDVGQHQMWAAQ CCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHH YLRNAPRRWISSAGLGTMGFGLPAAMGVKAALPTSEVICIAGDASVLMNIQELGTLSQYG HHHHCHHHHHHHCCCCCCCCCCHHHHCCEECCCCCCEEEEECCHHHHHHHHHHCCHHHCC LKIKLVIINNRWQGMVRQWQESFYHERYSSSDMSCGEPDFVKLAESFGVKGFLISERKQL EEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHH HNEFKSALDFDGPALINVRVRRGENCYPMVPPGKSNAQMVGYVNCKN HHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]