| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is phhB
Identifier: 123965790
GI number: 123965790
Start: 495350
End: 495640
Strand: Reverse
Name: phhB
Synonym: P9515_05551
Alternate gene names: NA
Gene position: 495640-495350 (Counterclockwise)
Preceding gene: 123965791
Following gene: 123965789
Centisome position: 29.08
GC content: 28.52
Gene sequence:
>291_bases ATGAAACCACACCTTCTACAAAATGAGGAATTAAAAGAACTAATTGCCAAAATACCCGGATGGGAAATCATCTCAAATCA CTTAGAAAGAGAGTTTAATTTTGGTGACTTTATAGAAGCTTTTTCCTTTATGACAAAGATTGCTTTAATTTGTGAAAAAT ATAATCATCATCCCAATTGGGAAAATGTCTATTCGAAAGTAATTATTAAACTAAGTACACATGATTTAGGAGGTATTACA AATTTAGATCAGAAAATTGCTTCGGAAATTAATGAAATTTTCGAAAAATAA
Upstream 100 bases:
>100_bases GGAACATCGATTTAGTAAAAAAGAAAGAATTATAAGTGTTCATATTATTGGTTCAAAAAGTTAAAATATCTATAATGATA TTCAGCAATATTAAATATAA
Downstream 100 bases:
>100_bases TTTAATATAGAATTACTTTATTCTTTCAAAAGATCATAATTTAAATGATTGAAAAATTGATACCTGTAACCATTATTAGT GGATTCTTGGGATCAGGGAA
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MKPHLLQNEELKELIAKIPGWEIISNHLEREFNFGDFIEAFSFMTKIALICEKYNHHPNWENVYSKVIIKLSTHDLGGIT NLDQKIASEINEIFEK
Sequences:
>Translated_96_residues MKPHLLQNEELKELIAKIPGWEIISNHLEREFNFGDFIEAFSFMTKIALICEKYNHHPNWENVYSKVIIKLSTHDLGGIT NLDQKIASEINEIFEK >Mature_96_residues MKPHLLQNEELKELIAKIPGWEIISNHLEREFNFGDFIEAFSFMTKIALICEKYNHHPNWENVYSKVIIKLSTHDLGGIT NLDQKIASEINEIFEK
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
Organism=Homo sapiens, GI134133240, Length=89, Percent_Identity=44.9438202247191, Blast_Score=77, Evalue=3e-15, Organism=Homo sapiens, GI4557831, Length=96, Percent_Identity=41.6666666666667, Blast_Score=76, Evalue=5e-15, Organism=Caenorhabditis elegans, GI115533705, Length=97, Percent_Identity=45.360824742268, Blast_Score=88, Evalue=8e-19, Organism=Drosophila melanogaster, GI45549100, Length=84, Percent_Identity=42.8571428571429, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_PROM5 (A2BVF3)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001010871.1 - ProteinModelPortal: A2BVF3 - SMR: A2BVF3 - STRING: A2BVF3 - GeneID: 4719773 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_05551 - eggNOG: COG2154 - HOGENOM: HBG705804 - OMA: IALICEK - ProtClustDB: PRK00823 - BioCyc: PMAR167542:P9515ORF_0591-MONOMER - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 11255; Mature: 11255
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPHLLQNEELKELIAKIPGWEIISNHLEREFNFGDFIEAFSFMTKIALICEKYNHHPNW CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH ENVYSKVIIKLSTHDLGGITNLDQKIASEINEIFEK HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKPHLLQNEELKELIAKIPGWEIISNHLEREFNFGDFIEAFSFMTKIALICEKYNHHPNW CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH ENVYSKVIIKLSTHDLGGITNLDQKIASEINEIFEK HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA