Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965786

Identifier: 123965786

GI number: 123965786

Start: 490501

End: 491724

Strand: Direct

Name: 123965786

Synonym: P9515_05511

Alternate gene names: NA

Gene position: 490501-491724 (Clockwise)

Preceding gene: 123965785

Following gene: 123965787

Centisome position: 28.78

GC content: 30.56

Gene sequence:

>1224_bases
ATGGAAGAAATATTTATTGAATGTTCCCCTGGGGTCTCTGGCGACATGTTACTAGGAGCCTTTATCGACTTGGGTGTACC
AAAAAATATAATTGAAAAAACTCTTACATGTTTTGGACTAGAAAAATTATATTACTTAAATTTTAGGGAATCGAAAAGTT
GTTCAATTCGAGGAGTGAAGGTTGAAATTGAAAAAATTGATCAAAGCACAAAAAGAGATTGGAGTAGTATCAAAAATTTA
ATTTTAAAGGCTCAATTAGAAAAAAAATTAAAAAAAAGAATTTACGAAGTTTTTGAGTCTTTAGCTTTTGCAGAGGGAAT
AGTTCATGGTATTGATCCTGAGAAAGTTCATTTTCATGAGATTGGTGCAATTGATTCATTAGTCGATATCATTGGCGTTT
GCGCTTCAATTGAATATTTAAAACCAAAAAAGGTTTTTTGTAATGAACCAACATTAGGGAGAGGTTTTGTTCAAACTGAT
CATGGCAAACTATCAATTCCATCTCCTGCGGTTATAGAGTTATTGAGAAAAAAAGATATTAAAGTGATTTCAAGGATTGA
TGTAATAGAGGGGGAATTGTCAACACCAACTGGAATAGCTCTCCTTTGTAATTTAGTTGAATCTTTCAATATCCCTAATA
AATATTCTATTAATTCCTATGGAGTAGGTATTGGGAACTTGGAACTGTCATGTCCAAATTTGGTAAGGGTTTTAAAAATT
AATACTGATAATGAAAATCTAATACATAAAAAAATCAGCCCAAGATATGAAGAGATTTCTATTCAAGAGGCATTGATTGA
TGATCAAACATCTGAAGAAATTGCAAATCTTTTAGAGATATTTAGAAAACAAGGAGCTCATGATGTTTCTTGTCAGACAA
TTAATATGAAAAAAAATAGAACTGGTTTTTCGATCCAAGTTATCTTACCTATTGAAAAGCAAGAATATTTCAGGAAATTA
TGGTTTCAATATTCCAACACAATAGGATTGAGAGAAAGGAAAGAATTTAGGTGGGTTTTACTTAGAAGAAGAGGAGAGTG
TTTAACTACTTTTGGAAATATTAAGTTTAAACAATCAATGAAACCTGATGGAACTATTTCAATGAAACCAGAAAATGATG
AAATTTTAAGATTGCAGATTGAACATAATAAAACAGCGCAAGAGGTAAGAAGAATTATTAAAGAGTCATGCAATGAATTT
AAAGCCTTTGAAGATTGGAAATAA

Upstream 100 bases:

>100_bases
CGAAGTTATTGAAAAAATAAAATCTAAAAAAGTATAGTATTCCATATGATTAGAAATTTTTTATCTGTGAATTTTTATTA
TTAAAAATCTATAAAGGGCT

Downstream 100 bases:

>100_bases
GATTTAAGATGCAAAAAGATTTTTTGATTAAGGTTCTTAAGAATATTAATTTTGAGATGCTTAAGAACCTTTTTTTTCTT
TTGAGTTTATCTTATTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MEEIFIECSPGVSGDMLLGAFIDLGVPKNIIEKTLTCFGLEKLYYLNFRESKSCSIRGVKVEIEKIDQSTKRDWSSIKNL
ILKAQLEKKLKKRIYEVFESLAFAEGIVHGIDPEKVHFHEIGAIDSLVDIIGVCASIEYLKPKKVFCNEPTLGRGFVQTD
HGKLSIPSPAVIELLRKKDIKVISRIDVIEGELSTPTGIALLCNLVESFNIPNKYSINSYGVGIGNLELSCPNLVRVLKI
NTDNENLIHKKISPRYEEISIQEALIDDQTSEEIANLLEIFRKQGAHDVSCQTINMKKNRTGFSIQVILPIEKQEYFRKL
WFQYSNTIGLRERKEFRWVLLRRRGECLTTFGNIKFKQSMKPDGTISMKPENDEILRLQIEHNKTAQEVRRIIKESCNEF
KAFEDWK

Sequences:

>Translated_407_residues
MEEIFIECSPGVSGDMLLGAFIDLGVPKNIIEKTLTCFGLEKLYYLNFRESKSCSIRGVKVEIEKIDQSTKRDWSSIKNL
ILKAQLEKKLKKRIYEVFESLAFAEGIVHGIDPEKVHFHEIGAIDSLVDIIGVCASIEYLKPKKVFCNEPTLGRGFVQTD
HGKLSIPSPAVIELLRKKDIKVISRIDVIEGELSTPTGIALLCNLVESFNIPNKYSINSYGVGIGNLELSCPNLVRVLKI
NTDNENLIHKKISPRYEEISIQEALIDDQTSEEIANLLEIFRKQGAHDVSCQTINMKKNRTGFSIQVILPIEKQEYFRKL
WFQYSNTIGLRERKEFRWVLLRRRGECLTTFGNIKFKQSMKPDGTISMKPENDEILRLQIEHNKTAQEVRRIIKESCNEF
KAFEDWK
>Mature_407_residues
MEEIFIECSPGVSGDMLLGAFIDLGVPKNIIEKTLTCFGLEKLYYLNFRESKSCSIRGVKVEIEKIDQSTKRDWSSIKNL
ILKAQLEKKLKKRIYEVFESLAFAEGIVHGIDPEKVHFHEIGAIDSLVDIIGVCASIEYLKPKKVFCNEPTLGRGFVQTD
HGKLSIPSPAVIELLRKKDIKVISRIDVIEGELSTPTGIALLCNLVESFNIPNKYSINSYGVGIGNLELSCPNLVRVLKI
NTDNENLIHKKISPRYEEISIQEALIDDQTSEEIANLLEIFRKQGAHDVSCQTINMKKNRTGFSIQVILPIEKQEYFRKL
WFQYSNTIGLRERKEFRWVLLRRRGECLTTFGNIKFKQSMKPDGTISMKPENDEILRLQIEHNKTAQEVRRIIKESCNEF
KAFEDWK

Specific function: Unknown

COG id: COG1641

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0272 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002822 [H]

Pfam domain/function: PF01969 DUF111 [H]

EC number: NA

Molecular weight: Translated: 46646; Mature: 46646

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIFIECSPGVSGDMLLGAFIDLGVPKNIIEKTLTCFGLEKLYYLNFRESKSCSIRGVK
CCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEE
VEIEKIDQSTKRDWSSIKNLILKAQLEKKLKKRIYEVFESLAFAEGIVHGIDPEKVHFHE
EEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
IGAIDSLVDIIGVCASIEYLKPKKVFCNEPTLGRGFVQTDHGKLSIPSPAVIELLRKKDI
HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEECCCCCEECCCHHHHHHHHHCCH
KVISRIDVIEGELSTPTGIALLCNLVESFNIPNKYSINSYGVGIGNLELSCPNLVRVLKI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCEEECCCCEEEEEEE
NTDNENLIHKKISPRYEEISIQEALIDDQTSEEIANLLEIFRKQGAHDVSCQTINMKKNR
CCCCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
TGFSIQVILPIEKQEYFRKLWFQYSNTIGLRERKEFRWVLLRRRGECLTTFGNIKFKQSM
CCEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEEECCC
KPDGTISMKPENDEILRLQIEHNKTAQEVRRIIKESCNEFKAFEDWK
CCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEEIFIECSPGVSGDMLLGAFIDLGVPKNIIEKTLTCFGLEKLYYLNFRESKSCSIRGVK
CCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEE
VEIEKIDQSTKRDWSSIKNLILKAQLEKKLKKRIYEVFESLAFAEGIVHGIDPEKVHFHE
EEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
IGAIDSLVDIIGVCASIEYLKPKKVFCNEPTLGRGFVQTDHGKLSIPSPAVIELLRKKDI
HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEECCCCCEECCCHHHHHHHHHCCH
KVISRIDVIEGELSTPTGIALLCNLVESFNIPNKYSINSYGVGIGNLELSCPNLVRVLKI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCEEECCCCEEEEEEE
NTDNENLIHKKISPRYEEISIQEALIDDQTSEEIANLLEIFRKQGAHDVSCQTINMKKNR
CCCCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
TGFSIQVILPIEKQEYFRKLWFQYSNTIGLRERKEFRWVLLRRRGECLTTFGNIKFKQSM
CCEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEEECCC
KPDGTISMKPENDEILRLQIEHNKTAQEVRRIIKESCNEFKAFEDWK
CCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]