| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965787
Identifier: 123965787
GI number: 123965787
Start: 491715
End: 492677
Strand: Direct
Name: 123965787
Synonym: P9515_05521
Alternate gene names: NA
Gene position: 491715-492677 (Clockwise)
Preceding gene: 123965786
Following gene: 123965792
Centisome position: 28.85
GC content: 25.55
Gene sequence:
>963_bases TTGGAAATAAGATTTAAGATGCAAAAAGATTTTTTGATTAAGGTTCTTAAGAATATTAATTTTGAGATGCTTAAGAACCT TTTTTTTCTTTTGAGTTTATCTTATTTCTGTATTTATTTTTTTAAAAATTTTGATCAAATTTCATTCAATGTAGATTTCG CTAGAAACGCTAACTATATATTGTTATCATTTTTGCTTTGTATATTAAGCATTTTTTTTAACGCACTAGCTTGGAAAAAT ATAGTTATTTGGTTTGGTAAAACTAAGACAAAAAATAATTTAATTTCCTTTTATGCCATTACGAATATTCTTAAATATGT TCCGGGTGGTATTTGGCATTTTTTTGAAAGATATAGCTTTTTAAAAGATATTAGTAATCCTCAATTGGCTTTCTACACTT CACTTATTGAACCTTATTTTATGTTGTGTTCATCTTTTCTCTTGGCTTCGGTCGGAATAATTTTTTCCCCATTTTATTTT TTATTACTATTACCATTGCTATTTCTCAATAAAAAATTAATCTATCTAATTTTACGAAGGTTAGAAACCTTAAAAACTAA GACAATTAGCGTTTTGAAAATTAAAAATGCCAAGTATCAATTTAATGAAAGAATAAAAATAATTTCTTTCTTCCCTTCCA AAGCCTTTTTTTTTGAAACTCTTTTTGTTTTATCAAAATTTATTGGATTTATTATTTGCCTTTACATAGTAAATTTTGAG CAGCAATATAATATTTTCTATTTATTAGTAATTTTTTGTATGTCTTGGGCTATAGGTTTAGTAGTTCCAACTGCTCCTGG AGGGATCGGTGTCTTTGAATCTTGTTTCCTTTTTTTTGTTGGGAAAAACATTCCACAAAATCCAATCTTTGTAAGTTTAA TTTATTTTAGATTGATATCTACTTCGGCAGATTTATTATTAGGCCTCCCTTTCTTATTTAGAAAACTTTTAAAAAGAATT TAA
Upstream 100 bases:
>100_bases ATGATGAAATTTTAAGATTGCAGATTGAACATAATAAAACAGCGCAAGAGGTAAGAAGAATTATTAAAGAGTCATGCAAT GAATTTAAAGCCTTTGAAGA
Downstream 100 bases:
>100_bases TTCTTTTTTTCTAAACTTGGAATCAATGTACTCGATGCAATTAAACCCACAATCGTTATGAAGAGTGCTGGTAATAGTGC TTCAGCCATTCGCTCATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MEIRFKMQKDFLIKVLKNINFEMLKNLFFLLSLSYFCIYFFKNFDQISFNVDFARNANYILLSFLLCILSIFFNALAWKN IVIWFGKTKTKNNLISFYAITNILKYVPGGIWHFFERYSFLKDISNPQLAFYTSLIEPYFMLCSSFLLASVGIIFSPFYF LLLLPLLFLNKKLIYLILRRLETLKTKTISVLKIKNAKYQFNERIKIISFFPSKAFFFETLFVLSKFIGFIICLYIVNFE QQYNIFYLLVIFCMSWAIGLVVPTAPGGIGVFESCFLFFVGKNIPQNPIFVSLIYFRLISTSADLLLGLPFLFRKLLKRI
Sequences:
>Translated_320_residues MEIRFKMQKDFLIKVLKNINFEMLKNLFFLLSLSYFCIYFFKNFDQISFNVDFARNANYILLSFLLCILSIFFNALAWKN IVIWFGKTKTKNNLISFYAITNILKYVPGGIWHFFERYSFLKDISNPQLAFYTSLIEPYFMLCSSFLLASVGIIFSPFYF LLLLPLLFLNKKLIYLILRRLETLKTKTISVLKIKNAKYQFNERIKIISFFPSKAFFFETLFVLSKFIGFIICLYIVNFE QQYNIFYLLVIFCMSWAIGLVVPTAPGGIGVFESCFLFFVGKNIPQNPIFVSLIYFRLISTSADLLLGLPFLFRKLLKRI >Mature_320_residues MEIRFKMQKDFLIKVLKNINFEMLKNLFFLLSLSYFCIYFFKNFDQISFNVDFARNANYILLSFLLCILSIFFNALAWKN IVIWFGKTKTKNNLISFYAITNILKYVPGGIWHFFERYSFLKDISNPQLAFYTSLIEPYFMLCSSFLLASVGIIFSPFYF LLLLPLLFLNKKLIYLILRRLETLKTKTISVLKIKNAKYQFNERIKIISFFPSKAFFFETLFVLSKFIGFIICLYIVNFE QQYNIFYLLVIFCMSWAIGLVVPTAPGGIGVFESCFLFFVGKNIPQNPIFVSLIYFRLISTSADLLLGLPFLFRKLLKRI
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37741; Mature: 37741
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRFKMQKDFLIKVLKNINFEMLKNLFFLLSLSYFCIYFFKNFDQISFNVDFARNANYI CCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH LLSFLLCILSIFFNALAWKNIVIWFGKTKTKNNLISFYAITNILKYVPGGIWHFFERYSF HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH LKDISNPQLAFYTSLIEPYFMLCSSFLLASVGIIFSPFYFLLLLPLLFLNKKLIYLILRR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETLKTKTISVLKIKNAKYQFNERIKIISFFPSKAFFFETLFVLSKFIGFIICLYIVNFE HHHHHHHHHHEEEEECCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCH QQYNIFYLLVIFCMSWAIGLVVPTAPGGIGVFESCFLFFVGKNIPQNPIFVSLIYFRLIS HHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TSADLLLGLPFLFRKLLKRI CCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MEIRFKMQKDFLIKVLKNINFEMLKNLFFLLSLSYFCIYFFKNFDQISFNVDFARNANYI CCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH LLSFLLCILSIFFNALAWKNIVIWFGKTKTKNNLISFYAITNILKYVPGGIWHFFERYSF HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH LKDISNPQLAFYTSLIEPYFMLCSSFLLASVGIIFSPFYFLLLLPLLFLNKKLIYLILRR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETLKTKTISVLKIKNAKYQFNERIKIISFFPSKAFFFETLFVLSKFIGFIICLYIVNFE HHHHHHHHHHEEEEECCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCH QQYNIFYLLVIFCMSWAIGLVVPTAPGGIGVFESCFLFFVGKNIPQNPIFVSLIYFRLIS HHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TSADLLLGLPFLFRKLLKRI CCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA