Click here to switch to the map view.

The map label for this gene is 123965683

Identifier: 123965683

GI number: 123965683

Start: 399717

End: 399998

Strand: Reverse

Name: 123965683

Synonym: P9515_04481

Alternate gene names: NA

Gene position: 399998-399717 (Counterclockwise)

Preceding gene: 123965694

Following gene: 123965682

Centisome position: 23.47

GC content: 39.72

Gene sequence:

>282_bases
ATGAGAGTTGTTCCTTTACCGGATAAAGCCAGAGAGATAATTGAAGAATTACAGGAAAGGGAAGGAAGAATAATTGATCT
TACAAAAGGTAGCGCGAGGCATGGATTTGATAAAGCCAGAAAAAAAGCGGGACTTGAAACTCTCAGATTTCATGATCTAA
GGCATATTGCCATAAGCAGAATGTGGAGTTCCGGAATGAATGCCACGGAGATAAGTGCATGCAGTAGTCACAGAGATATA
AAAATGCTCATGAGCTACAGCCACTTTCAACTTTCCATATAA

Upstream 100 bases:

>100_bases
GTCGGTCCGAACTTTTAAGTCTGACCTGAAGAAATATTGATCTGAAGAAAAAATTACTATATATCAAAAGAATTGTACCG
CCAGAGTCAGTTCATCTGAG

Downstream 100 bases:

>100_bases
ATAATGAATTACCCTATTGGGGGGACTTATCAAATGATGGGACGTATAAAACGTTCAGCAAAATTTGTAATGAATTTTGA
GATTTTGACTTCCAAATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Family Protein; Site-Specific Recombinase XerD; Site-Specific Recombinase Phage Integrase Family; Integrase

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MRVVPLPDKAREIIEELQEREGRIIDLTKGSARHGFDKARKKAGLETLRFHDLRHIAISRMWSSGMNATEISACSSHRDI
KMLMSYSHFQLSI

Sequences:

>Translated_93_residues
MRVVPLPDKAREIIEELQEREGRIIDLTKGSARHGFDKARKKAGLETLRFHDLRHIAISRMWSSGMNATEISACSSHRDI
KMLMSYSHFQLSI
>Mature_93_residues
MRVVPLPDKAREIIEELQEREGRIIDLTKGSARHGFDKARKKAGLETLRFHDLRHIAISRMWSSGMNATEISACSSHRDI
KMLMSYSHFQLSI

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10708; Mature: 10708

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVPLPDKAREIIEELQEREGRIIDLTKGSARHGFDKARKKAGLETLRFHDLRHIAISR
CCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
MWSSGMNATEISACSSHRDIKMLMSYSHFQLSI
HHHCCCCCHHHHHHCCCCHHHHHHCCCCEEECC
>Mature Secondary Structure
MRVVPLPDKAREIIEELQEREGRIIDLTKGSARHGFDKARKKAGLETLRFHDLRHIAISR
CCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
MWSSGMNATEISACSSHRDIKMLMSYSHFQLSI
HHHCCCCCHHHHHHCCCCHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA