| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965682
Identifier: 123965682
GI number: 123965682
Start: 397587
End: 399551
Strand: Reverse
Name: 123965682
Synonym: P9515_04471
Alternate gene names: NA
Gene position: 399551-397587 (Counterclockwise)
Preceding gene: 123965683
Following gene: 123965681
Centisome position: 23.45
GC content: 42.04
Gene sequence:
>1965_bases GTGTCTGAAGAAGACTTGAACACAACTAAGACACCACTTAAATGGATTGGAACGCCATCCCTGGGTCAGGGTAGATCCAG TGGGGGTAATGCTGCGAGTGAGATATTTGAGGCAGGTGCTTCTCAGAGAAAACGTTCTCTGCTCGAGACCCTGGTAAGAG AGATATGTCAGAACAGTCTTGATCAGAGAAAGGATAAAAAGGTGAAAATATTTTTTGATCTGATAATCCTCAAGGGAGAG AAAAAAGAGGAATTTCTGAAATCAATAAACAGTGAAACTCTTATCCCTCATCTTTCTTCAGTGAAAGGTTCCAGTGGAAC TGCTCTTACTCTGAAAGCAGGATTGGAATCGATGAAATCCTCAGACCTCGTCTGTCTGAGAATCAGTGATTATGGTACTG ACGGCCTTACTGGTGATGACTGGGATGAGAAAGGAAATTTCCGAAAGCTCTGTGTACAGAATTTCTCAACTGGGAAAGAG TCAGGGTTAGGGGGCAGTTTTGGTCTTGGGAAAGCAGTCAGTTGGATGCATTCCAGAATATTCACTGTTCTTTTCTCTTC CAGAATTGAAGGGGAAAAGGATCTGAGAATCTTTGGGAGAAGTGAACTTCCAGCTCATGAAATGAATGGCAAGTCCTGGC TTGATGGAGCCTATATGGGTTCTGAAATTAAGAAAGATGGAATACCTGTAGCAGAATCAACATGGCTGAAAGATGGAGAT GCAGAAAAAATTCTCCTTAATCGTGACAATGAAACCGAATGCGGAACAACTATTCTCATCCCAACTTTTCATGAACCGGA TCGTGATGATACAGGTTCATCAGGGATAAGAGAGCCTGAAGAACTCTGCAGAGATTTCACAGAAGCTGCATCGAAATGGT TCTGGCCGGCAATCAGCTGGAAAAGGCTTGATTTCAAAGCAAGGGTTTTTCGTGAAGAGGGTAAATCGGCTGAGTTTGTA TCTGAGGCTGCGGCTAATGGGATATGGTCTTCATTTGTTGAATGTGGAAGAGTTGAGCCTTTCGAAAATACAAAATCATT ATTCCCCGGGGATAGTTCCTCAATAGACATTGAGTTTCCAATACCTGCAAGAGTCGAGCCCTCAGACAACCCAGAACTTC TTCATGATGAGCTTAAAAGCTTTGTCAGACTTGGAGTTACAAGAGTCTCATCCAAGGAGGAAAGTTTACCTTGCCGTTCA ACAATCGCCCTTATAAGGGGTTCGGGAATGGTTGTCGATTATGCCGAAGGGACAAGATTAAATGATGGGGGTTCCTACTG CGCTGCTGCATTTGTCGGTACATCATTGAATGAAATTGCTGAATCTGAAAAAACTGAATTGAATAAAGAGAATGCTCTAT TTGCTGAAGAATATTTCCGAGCTGGTGAACCTGTCACCCATGATGACTGGTTGCCAACAACCAGAAGACTTAGGGAGAGC TATACCTGGAAAGGTCATGCAAACAGACTCAGAGGAATACGATACGAACTCAGACAAATACTTATTCAAAACCTTTTGAC CTCATTCGTTTCTCGTCCTGATGAAGGGCCTGAGATGCTTAGAAGAATGCTTAATCTAGGGAGAGGAATGAAGCAAAAGA AGATTCAGTCAAAGGCTAGAAATTCTTCTCTTGAAGTTGTAATAGACAGGCAGAGATCCTTCTTCAACAAGAAAACTAAT GGCTGGAGAATAACTGGAGAATTAGTGAGATCAGGGGATTCAAAAAGATCTGCAAAAGTTCATTTATCTTTTCAAAGCAT CGCAGACAGTGGACAGGGGGAAATGTGGGGGATAAGTGATATGCAGATTTTAGGAAGTGAAAAACATATTTCTCTAGATG ACTCAGATTCAAAAAGATTTGTATTCTCTGCGGAAAATCAATTCTCATCAGTTCCTTTTGAATGCACAGTCAAACCTCCA ATAGGAGTGAACCCTGAAATTGCTGGATTCAGGAAAGTAGGTTAG
Upstream 100 bases:
>100_bases TGTAATGAATTTTGAGATTTTGACTTCCAAATGTTGCAATTCTCTGGCCTTAAGATGAAAAAAAAATTATCCCAACTATT ATTTATTAACGCTTTATATA
Downstream 100 bases:
>100_bases TTATGCATTTCGTCCCCTGGAGAACAATCGATCTTGATGGAGCATTTAGAATCACTGCTCCTGAGAGTATTTCTGAAGAG GTGATTCAAGAAGTCAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 654; Mature: 653
Protein sequence:
>654_residues MSEEDLNTTKTPLKWIGTPSLGQGRSSGGNAASEIFEAGASQRKRSLLETLVREICQNSLDQRKDKKVKIFFDLIILKGE KKEEFLKSINSETLIPHLSSVKGSSGTALTLKAGLESMKSSDLVCLRISDYGTDGLTGDDWDEKGNFRKLCVQNFSTGKE SGLGGSFGLGKAVSWMHSRIFTVLFSSRIEGEKDLRIFGRSELPAHEMNGKSWLDGAYMGSEIKKDGIPVAESTWLKDGD AEKILLNRDNETECGTTILIPTFHEPDRDDTGSSGIREPEELCRDFTEAASKWFWPAISWKRLDFKARVFREEGKSAEFV SEAAANGIWSSFVECGRVEPFENTKSLFPGDSSSIDIEFPIPARVEPSDNPELLHDELKSFVRLGVTRVSSKEESLPCRS TIALIRGSGMVVDYAEGTRLNDGGSYCAAAFVGTSLNEIAESEKTELNKENALFAEEYFRAGEPVTHDDWLPTTRRLRES YTWKGHANRLRGIRYELRQILIQNLLTSFVSRPDEGPEMLRRMLNLGRGMKQKKIQSKARNSSLEVVIDRQRSFFNKKTN GWRITGELVRSGDSKRSAKVHLSFQSIADSGQGEMWGISDMQILGSEKHISLDDSDSKRFVFSAENQFSSVPFECTVKPP IGVNPEIAGFRKVG
Sequences:
>Translated_654_residues MSEEDLNTTKTPLKWIGTPSLGQGRSSGGNAASEIFEAGASQRKRSLLETLVREICQNSLDQRKDKKVKIFFDLIILKGE KKEEFLKSINSETLIPHLSSVKGSSGTALTLKAGLESMKSSDLVCLRISDYGTDGLTGDDWDEKGNFRKLCVQNFSTGKE SGLGGSFGLGKAVSWMHSRIFTVLFSSRIEGEKDLRIFGRSELPAHEMNGKSWLDGAYMGSEIKKDGIPVAESTWLKDGD AEKILLNRDNETECGTTILIPTFHEPDRDDTGSSGIREPEELCRDFTEAASKWFWPAISWKRLDFKARVFREEGKSAEFV SEAAANGIWSSFVECGRVEPFENTKSLFPGDSSSIDIEFPIPARVEPSDNPELLHDELKSFVRLGVTRVSSKEESLPCRS TIALIRGSGMVVDYAEGTRLNDGGSYCAAAFVGTSLNEIAESEKTELNKENALFAEEYFRAGEPVTHDDWLPTTRRLRES YTWKGHANRLRGIRYELRQILIQNLLTSFVSRPDEGPEMLRRMLNLGRGMKQKKIQSKARNSSLEVVIDRQRSFFNKKTN GWRITGELVRSGDSKRSAKVHLSFQSIADSGQGEMWGISDMQILGSEKHISLDDSDSKRFVFSAENQFSSVPFECTVKPP IGVNPEIAGFRKVG >Mature_653_residues SEEDLNTTKTPLKWIGTPSLGQGRSSGGNAASEIFEAGASQRKRSLLETLVREICQNSLDQRKDKKVKIFFDLIILKGEK KEEFLKSINSETLIPHLSSVKGSSGTALTLKAGLESMKSSDLVCLRISDYGTDGLTGDDWDEKGNFRKLCVQNFSTGKES GLGGSFGLGKAVSWMHSRIFTVLFSSRIEGEKDLRIFGRSELPAHEMNGKSWLDGAYMGSEIKKDGIPVAESTWLKDGDA EKILLNRDNETECGTTILIPTFHEPDRDDTGSSGIREPEELCRDFTEAASKWFWPAISWKRLDFKARVFREEGKSAEFVS EAAANGIWSSFVECGRVEPFENTKSLFPGDSSSIDIEFPIPARVEPSDNPELLHDELKSFVRLGVTRVSSKEESLPCRST IALIRGSGMVVDYAEGTRLNDGGSYCAAAFVGTSLNEIAESEKTELNKENALFAEEYFRAGEPVTHDDWLPTTRRLRESY TWKGHANRLRGIRYELRQILIQNLLTSFVSRPDEGPEMLRRMLNLGRGMKQKKIQSKARNSSLEVVIDRQRSFFNKKTNG WRITGELVRSGDSKRSAKVHLSFQSIADSGQGEMWGISDMQILGSEKHISLDDSDSKRFVFSAENQFSSVPFECTVKPPI GVNPEIAGFRKVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72907; Mature: 72776
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEDLNTTKTPLKWIGTPSLGQGRSSGGNAASEIFEAGASQRKRSLLETLVREICQNSL CCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH DQRKDKKVKIFFDLIILKGEKKEEFLKSINSETLIPHLSSVKGSSGTALTLKAGLESMKS HHHCCCEEEEEEEEEEECCCCHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEHHHHHHHCC SDLVCLRISDYGTDGLTGDDWDEKGNFRKLCVQNFSTGKESGLGGSFGLGKAVSWMHSRI CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH FTVLFSSRIEGEKDLRIFGRSELPAHEMNGKSWLDGAYMGSEIKKDGIPVAESTWLKDGD HHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCCCCHHHHCCHHHHCCCCCCHHCCCCCCC AEKILLNRDNETECGTTILIPTFHEPDRDDTGSSGIREPEELCRDFTEAASKWFWPAISW CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH KRLDFKARVFREEGKSAEFVSEAAANGIWSSFVECGRVEPFENTKSLFPGDSSSIDIEFP HHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC IPARVEPSDNPELLHDELKSFVRLGVTRVSSKEESLPCRSTIALIRGSGMVVDYAEGTRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEECCCEEEECCCCCEE NDGGSYCAAAFVGTSLNEIAESEKTELNKENALFAEEYFRAGEPVTHDDWLPTTRRLRES CCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH YTWKGHANRLRGIRYELRQILIQNLLTSFVSRPDEGPEMLRRMLNLGRGMKQKKIQSKAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHC NSSLEVVIDRQRSFFNKKTNGWRITGELVRSGDSKRSAKVHLSFQSIADSGQGEMWGISD CCCEEEEEECHHHHHCCCCCCEEEEHHHHHCCCCCCCEEEEEEHHHHHCCCCCCEECCCC MQILGSEKHISLDDSDSKRFVFSAENQFSSVPFECTVKPPIGVNPEIAGFRKVG HHEECCCCEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SEEDLNTTKTPLKWIGTPSLGQGRSSGGNAASEIFEAGASQRKRSLLETLVREICQNSL CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH DQRKDKKVKIFFDLIILKGEKKEEFLKSINSETLIPHLSSVKGSSGTALTLKAGLESMKS HHHCCCEEEEEEEEEEECCCCHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEHHHHHHHCC SDLVCLRISDYGTDGLTGDDWDEKGNFRKLCVQNFSTGKESGLGGSFGLGKAVSWMHSRI CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH FTVLFSSRIEGEKDLRIFGRSELPAHEMNGKSWLDGAYMGSEIKKDGIPVAESTWLKDGD HHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCCCCHHHHCCHHHHCCCCCCHHCCCCCCC AEKILLNRDNETECGTTILIPTFHEPDRDDTGSSGIREPEELCRDFTEAASKWFWPAISW CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH KRLDFKARVFREEGKSAEFVSEAAANGIWSSFVECGRVEPFENTKSLFPGDSSSIDIEFP HHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC IPARVEPSDNPELLHDELKSFVRLGVTRVSSKEESLPCRSTIALIRGSGMVVDYAEGTRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEECCCEEEECCCCCEE NDGGSYCAAAFVGTSLNEIAESEKTELNKENALFAEEYFRAGEPVTHDDWLPTTRRLRES CCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH YTWKGHANRLRGIRYELRQILIQNLLTSFVSRPDEGPEMLRRMLNLGRGMKQKKIQSKAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHC NSSLEVVIDRQRSFFNKKTNGWRITGELVRSGDSKRSAKVHLSFQSIADSGQGEMWGISD CCCEEEEEECHHHHHCCCCCCEEEEHHHHHCCCCCCCEEEEEEHHHHHCCCCCCEECCCC MQILGSEKHISLDDSDSKRFVFSAENQFSSVPFECTVKPPIGVNPEIAGFRKVG HHEECCCCEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA