| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965642
Identifier: 123965642
GI number: 123965642
Start: 367782
End: 368582
Strand: Reverse
Name: 123965642
Synonym: P9515_04071
Alternate gene names: NA
Gene position: 368582-367782 (Counterclockwise)
Preceding gene: 123965651
Following gene: 123965636
Centisome position: 21.63
GC content: 31.21
Gene sequence:
>801_bases ATGAATGTAGGGAGTAACTATAATGATCAATTCTATAAATCACTAACAAATGGGTCATATATTAGTGCCAAGCATTATGT ATCTATTTTAAGTTCTGTACTTATAAAACCTAATAAAGTTGTTGATATTGGATGTGGCCGAGGGCCATGGTTAAAGGCAT TTGCTGATTCAGGTGCAAAAGAGTTGGTTGGGATAGATGGTGATTGGGTCTGCCAAGAAAATATGCTTGATAAAAAAATC AAATTCCATTCAATAGATCTTAGTTCTACTGTCATTAAAAATCCTGTTAATAAGAAATTTGATCTTGCCATGTCACTTGA AGTGGCCGAGCATTTAAAACCAGAACAAGCAACTACCTTTGTCAATTACTTAACAAACTTTTCTGAAACAATTCTATTTA GCGCTGCTTTTAGTGGTCAAGGAGGTACTGATCATTTTAATGAGAGACCGCATTCTTACTGGGCTAAAATTTTCATCAAA AATGGTTACTTGCCCTATGATCTTTTTCGTTCAAAGGTATGGGAAAATCAAGAGATAGAAGTTTGGTACCGTCAAAATAC TTTTTTATACCTAAAAAGTAATTCAAAATTTGAAAAAATATTTAAAGAAAAAGGTATAGAGCCTATTAGAGAAACAGCCC TTATGAACTATATTCATCCAGATTTATATCAAATAAGGGTAGAAGAATCTAAGCAATTAACTCAATTAATTATTAAATTA AGAAAATCAACTATATCAGGTCTTATAAAAAGGATTATGCCTAAATCCATAGTTAACTTTTTAAGGAAAATTCGGAAATA A
Upstream 100 bases:
>100_bases AGTTTATTTTGCAGAACCTGTAGATTATGTATTTATTTGAATCAAAACTTTTGTAATAAGCTATATTATTTAGGTTAATG ATTTCTCGAGAAAAGATTAT
Downstream 100 bases:
>100_bases AATATTAACTATGAATCAAATAAAATGTTTTGCATAGTTACTATTAATTCTCATTGATTTTTCAATAGATCATCACCATT CTATTTGTTTTCATGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MNVGSNYNDQFYKSLTNGSYISAKHYVSILSSVLIKPNKVVDIGCGRGPWLKAFADSGAKELVGIDGDWVCQENMLDKKI KFHSIDLSSTVIKNPVNKKFDLAMSLEVAEHLKPEQATTFVNYLTNFSETILFSAAFSGQGGTDHFNERPHSYWAKIFIK NGYLPYDLFRSKVWENQEIEVWYRQNTFLYLKSNSKFEKIFKEKGIEPIRETALMNYIHPDLYQIRVEESKQLTQLIIKL RKSTISGLIKRIMPKSIVNFLRKIRK
Sequences:
>Translated_266_residues MNVGSNYNDQFYKSLTNGSYISAKHYVSILSSVLIKPNKVVDIGCGRGPWLKAFADSGAKELVGIDGDWVCQENMLDKKI KFHSIDLSSTVIKNPVNKKFDLAMSLEVAEHLKPEQATTFVNYLTNFSETILFSAAFSGQGGTDHFNERPHSYWAKIFIK NGYLPYDLFRSKVWENQEIEVWYRQNTFLYLKSNSKFEKIFKEKGIEPIRETALMNYIHPDLYQIRVEESKQLTQLIIKL RKSTISGLIKRIMPKSIVNFLRKIRK >Mature_266_residues MNVGSNYNDQFYKSLTNGSYISAKHYVSILSSVLIKPNKVVDIGCGRGPWLKAFADSGAKELVGIDGDWVCQENMLDKKI KFHSIDLSSTVIKNPVNKKFDLAMSLEVAEHLKPEQATTFVNYLTNFSETILFSAAFSGQGGTDHFNERPHSYWAKIFIK NGYLPYDLFRSKVWENQEIEVWYRQNTFLYLKSNSKFEKIFKEKGIEPIRETALMNYIHPDLYQIRVEESKQLTQLIIKL RKSTISGLIKRIMPKSIVNFLRKIRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30751; Mature: 30751
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVGSNYNDQFYKSLTNGSYISAKHYVSILSSVLIKPNKVVDIGCGRGPWLKAFADSGAK CCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCH ELVGIDGDWVCQENMLDKKIKFHSIDLSSTVIKNPVNKKFDLAMSLEVAEHLKPEQATTF HEECCCCCEEECHHHHHHHHEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH VNYLTNFSETILFSAAFSGQGGTDHFNERPHSYWAKIFIKNGYLPYDLFRSKVWENQEIE HHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHCCCCCEE VWYRQNTFLYLKSNSKFEKIFKEKGIEPIRETALMNYIHPDLYQIRVEESKQLTQLIIKL EEEECCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH RKSTISGLIKRIMPKSIVNFLRKIRK HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVGSNYNDQFYKSLTNGSYISAKHYVSILSSVLIKPNKVVDIGCGRGPWLKAFADSGAK CCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCH ELVGIDGDWVCQENMLDKKIKFHSIDLSSTVIKNPVNKKFDLAMSLEVAEHLKPEQATTF HEECCCCCEEECHHHHHHHHEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH VNYLTNFSETILFSAAFSGQGGTDHFNERPHSYWAKIFIKNGYLPYDLFRSKVWENQEIE HHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHCCCCCEE VWYRQNTFLYLKSNSKFEKIFKEKGIEPIRETALMNYIHPDLYQIRVEESKQLTQLIIKL EEEECCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH RKSTISGLIKRIMPKSIVNFLRKIRK HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA