| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is ydjZ [C]
Identifier: 123965651
GI number: 123965651
Start: 373912
End: 374520
Strand: Reverse
Name: ydjZ [C]
Synonym: P9515_04161
Alternate gene names: 123965651
Gene position: 374520-373912 (Counterclockwise)
Preceding gene: 123965652
Following gene: 123965642
Centisome position: 21.98
GC content: 29.56
Gene sequence:
>609_bases GTGGTTGAAGCTTTATCAGGAAACTGGGGAATTTTATTAATTTTACTCTTGAGATTTACAAGCATTGTTATTCCTATCTT GCCGGGTACATATTGCTTATTAATTTCAGGATATCTTTTTGGATTAGTAAATGGATTACTAATAAGCTTTATCGCAGATT TAGTAGCATGCTCGATTAGTTTTTCATTATCAAGGAGATTTGGAAGAAAAATACTGCAACGAGTTATGTCAAAAAAATAT TTAGATAAATTTGAAAATTTGTCTAAGAAATATCTAGAGAAAAACTTGTTTCTTTTAACCGGTTTTCTAATGACGGGTTG GTTTGATTTTGTCAGTTATGGTGTTGGGCTTACTAAATTAAGGTTTAGAAAATTTCTTCTAGCTTTAATCGTTAGCTCTC TACTTTCAGATCTGCCATTTGTTGCTACTGGAAATGGTTTTAGAGAATTACAAAATCAGAATTTCAATATTAAAAAAATT ATTGATGGAGAAGTACCCTCACTTCAAAGAGAATATTTGATTGTATTTATAGTAAGCGTAATATTGATATTTAGTATGGG GATTATAAGAAATCTGATTGATAGGAAGTATCTTAAATCCACCAATTAA
Upstream 100 bases:
>100_bases TTGGAAATAAAGCTATTTTACTTTTTGTATTAACTTTTGATTTATTCATCAACTAAAAGTATTTATTGCAAATATATTAT TTAAAAATAGATTGATTTTT
Downstream 100 bases:
>100_bases TGAAGTTTAAATTTTTTAAATGGAATAGAAATTACATTATGTTCACTTTGGTTCTATGACTTTATTCACCCTTTGATAAA AAGTAATTAAACAATATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MVEALSGNWGILLILLLRFTSIVIPILPGTYCLLISGYLFGLVNGLLISFIADLVACSISFSLSRRFGRKILQRVMSKKY LDKFENLSKKYLEKNLFLLTGFLMTGWFDFVSYGVGLTKLRFRKFLLALIVSSLLSDLPFVATGNGFRELQNQNFNIKKI IDGEVPSLQREYLIVFIVSVILIFSMGIIRNLIDRKYLKSTN
Sequences:
>Translated_202_residues MVEALSGNWGILLILLLRFTSIVIPILPGTYCLLISGYLFGLVNGLLISFIADLVACSISFSLSRRFGRKILQRVMSKKY LDKFENLSKKYLEKNLFLLTGFLMTGWFDFVSYGVGLTKLRFRKFLLALIVSSLLSDLPFVATGNGFRELQNQNFNIKKI IDGEVPSLQREYLIVFIVSVILIFSMGIIRNLIDRKYLKSTN >Mature_202_residues MVEALSGNWGILLILLLRFTSIVIPILPGTYCLLISGYLFGLVNGLLISFIADLVACSISFSLSRRFGRKILQRVMSKKY LDKFENLSKKYLEKNLFLLTGFLMTGWFDFVSYGVGLTKLRFRKFLLALIVSSLLSDLPFVATGNGFRELQNQNFNIKKI IDGEVPSLQREYLIVFIVSVILIFSMGIIRNLIDRKYLKSTN
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22996; Mature: 22996
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEALSGNWGILLILLLRFTSIVIPILPGTYCLLISGYLFGLVNGLLISFIADLVACSIS CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSLSRRFGRKILQRVMSKKYLDKFENLSKKYLEKNLFLLTGFLMTGWFDFVSYGVGLTKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RFRKFLLALIVSSLLSDLPFVATGNGFRELQNQNFNIKKIIDGEVPSLQREYLIVFIVSV HHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCHHEECCCCCCHHHHHHHHHHHHHH ILIFSMGIIRNLIDRKYLKSTN HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVEALSGNWGILLILLLRFTSIVIPILPGTYCLLISGYLFGLVNGLLISFIADLVACSIS CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSLSRRFGRKILQRVMSKKYLDKFENLSKKYLEKNLFLLTGFLMTGWFDFVSYGVGLTKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RFRKFLLALIVSSLLSDLPFVATGNGFRELQNQNFNIKKIIDGEVPSLQREYLIVFIVSV HHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCHHEECCCCCCHHHHHHHHHHHHHH ILIFSMGIIRNLIDRKYLKSTN HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA