Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is ydjZ [C]

Identifier: 123965651

GI number: 123965651

Start: 373912

End: 374520

Strand: Reverse

Name: ydjZ [C]

Synonym: P9515_04161

Alternate gene names: 123965651

Gene position: 374520-373912 (Counterclockwise)

Preceding gene: 123965652

Following gene: 123965642

Centisome position: 21.98

GC content: 29.56

Gene sequence:

>609_bases
GTGGTTGAAGCTTTATCAGGAAACTGGGGAATTTTATTAATTTTACTCTTGAGATTTACAAGCATTGTTATTCCTATCTT
GCCGGGTACATATTGCTTATTAATTTCAGGATATCTTTTTGGATTAGTAAATGGATTACTAATAAGCTTTATCGCAGATT
TAGTAGCATGCTCGATTAGTTTTTCATTATCAAGGAGATTTGGAAGAAAAATACTGCAACGAGTTATGTCAAAAAAATAT
TTAGATAAATTTGAAAATTTGTCTAAGAAATATCTAGAGAAAAACTTGTTTCTTTTAACCGGTTTTCTAATGACGGGTTG
GTTTGATTTTGTCAGTTATGGTGTTGGGCTTACTAAATTAAGGTTTAGAAAATTTCTTCTAGCTTTAATCGTTAGCTCTC
TACTTTCAGATCTGCCATTTGTTGCTACTGGAAATGGTTTTAGAGAATTACAAAATCAGAATTTCAATATTAAAAAAATT
ATTGATGGAGAAGTACCCTCACTTCAAAGAGAATATTTGATTGTATTTATAGTAAGCGTAATATTGATATTTAGTATGGG
GATTATAAGAAATCTGATTGATAGGAAGTATCTTAAATCCACCAATTAA

Upstream 100 bases:

>100_bases
TTGGAAATAAAGCTATTTTACTTTTTGTATTAACTTTTGATTTATTCATCAACTAAAAGTATTTATTGCAAATATATTAT
TTAAAAATAGATTGATTTTT

Downstream 100 bases:

>100_bases
TGAAGTTTAAATTTTTTAAATGGAATAGAAATTACATTATGTTCACTTTGGTTCTATGACTTTATTCACCCTTTGATAAA
AAGTAATTAAACAATATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MVEALSGNWGILLILLLRFTSIVIPILPGTYCLLISGYLFGLVNGLLISFIADLVACSISFSLSRRFGRKILQRVMSKKY
LDKFENLSKKYLEKNLFLLTGFLMTGWFDFVSYGVGLTKLRFRKFLLALIVSSLLSDLPFVATGNGFRELQNQNFNIKKI
IDGEVPSLQREYLIVFIVSVILIFSMGIIRNLIDRKYLKSTN

Sequences:

>Translated_202_residues
MVEALSGNWGILLILLLRFTSIVIPILPGTYCLLISGYLFGLVNGLLISFIADLVACSISFSLSRRFGRKILQRVMSKKY
LDKFENLSKKYLEKNLFLLTGFLMTGWFDFVSYGVGLTKLRFRKFLLALIVSSLLSDLPFVATGNGFRELQNQNFNIKKI
IDGEVPSLQREYLIVFIVSVILIFSMGIIRNLIDRKYLKSTN
>Mature_202_residues
MVEALSGNWGILLILLLRFTSIVIPILPGTYCLLISGYLFGLVNGLLISFIADLVACSISFSLSRRFGRKILQRVMSKKY
LDKFENLSKKYLEKNLFLLTGFLMTGWFDFVSYGVGLTKLRFRKFLLALIVSSLLSDLPFVATGNGFRELQNQNFNIKKI
IDGEVPSLQREYLIVFIVSVILIFSMGIIRNLIDRKYLKSTN

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22996; Mature: 22996

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEALSGNWGILLILLLRFTSIVIPILPGTYCLLISGYLFGLVNGLLISFIADLVACSIS
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLSRRFGRKILQRVMSKKYLDKFENLSKKYLEKNLFLLTGFLMTGWFDFVSYGVGLTKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RFRKFLLALIVSSLLSDLPFVATGNGFRELQNQNFNIKKIIDGEVPSLQREYLIVFIVSV
HHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCHHEECCCCCCHHHHHHHHHHHHHH
ILIFSMGIIRNLIDRKYLKSTN
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVEALSGNWGILLILLLRFTSIVIPILPGTYCLLISGYLFGLVNGLLISFIADLVACSIS
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLSRRFGRKILQRVMSKKYLDKFENLSKKYLEKNLFLLTGFLMTGWFDFVSYGVGLTKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RFRKFLLALIVSSLLSDLPFVATGNGFRELQNQNFNIKKIIDGEVPSLQREYLIVFIVSV
HHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCHHEECCCCCCHHHHHHHHHHHHHH
ILIFSMGIIRNLIDRKYLKSTN
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA