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The map label for this gene is sua5 [H]

Identifier: 123965586

GI number: 123965586

Start: 323694

End: 324275

Strand: Direct

Name: sua5 [H]

Synonym: P9515_03511

Alternate gene names: 123965586

Gene position: 323694-324275 (Clockwise)

Preceding gene: 123965585

Following gene: 123965592

Centisome position: 18.99

GC content: 32.3

Gene sequence:

>582_bases
ATGAATGTTATTGCTAATAAATTAGCTGTAGAAAAACTAAATATTGGCTTACCTATAATTTTTCATACTGATACTTTACC
TGCTATTGGATGCCTCCCAAAGTTCTCAGAGATAATTTATAAGATTAAACAAAGAGATGTAAAGAAACCTTTGATTTTGA
TGGGAGCTGAAAGTTTTCAATTAAATGAGTTTGTTCATAAAACTGCTTTTGAGGATTACAAATATATGGCTTCTAGGTAT
TGGCCGGGACCATTAACAATGATTATTCCTATTTCTGAGAAAAGTAAACCATTGTTTTCTAATAAAAATTTGACATTAGG
TTTAAGAATTCCCAATTCAATTATGGCCAATTACCTTATAAAGGAAAGTGGCCCTTTGTTAACATCAAGTGCAAATATCT
CAGGTTTACCACCCTCTACAAATGCAAAAGATATTTCATTTGACTTGCCTAATGTGGATATTTTAGGACCTGTTCCTTGG
CCAAAATGTAGTGGAAAAGCAAGTACAATTATATCTTGGGTGAATAATGAGAAATGGAAACTCATTAGGGAAGGGGAAGT
TTTCATTCCAGGAATAAAGTGA

Upstream 100 bases:

>100_bases
TATTGAAAATCAATTTACTGATGTAGAAGTATTAAAAGATTTGTCTGGAATTGGAAGATTTACAATTGGAAGATATAAAT
AATTTATTAGGAGAAAACGA

Downstream 100 bases:

>100_bases
TGCTTTCTCTTTTCTTTTTTATTTTTTTAATACAATTTTTTTTTTATTGGATATTTGCACCTTTATCTAGATTGTTAACT
AATCTAATTGAGCTGAGGTT

Product: putative translation factor (SUA5)

Products: NA

Alternate protein names: t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNVIANKLAVEKLNIGLPIIFHTDTLPAIGCLPKFSEIIYKIKQRDVKKPLILMGAESFQLNEFVHKTAFEDYKYMASRY
WPGPLTMIIPISEKSKPLFSNKNLTLGLRIPNSIMANYLIKESGPLLTSSANISGLPPSTNAKDISFDLPNVDILGPVPW
PKCSGKASTIISWVNNEKWKLIREGEVFIPGIK

Sequences:

>Translated_193_residues
MNVIANKLAVEKLNIGLPIIFHTDTLPAIGCLPKFSEIIYKIKQRDVKKPLILMGAESFQLNEFVHKTAFEDYKYMASRY
WPGPLTMIIPISEKSKPLFSNKNLTLGLRIPNSIMANYLIKESGPLLTSSANISGLPPSTNAKDISFDLPNVDILGPVPW
PKCSGKASTIISWVNNEKWKLIREGEVFIPGIK
>Mature_193_residues
MNVIANKLAVEKLNIGLPIIFHTDTLPAIGCLPKFSEIIYKIKQRDVKKPLILMGAESFQLNEFVHKTAFEDYKYMASRY
WPGPLTMIIPISEKSKPLFSNKNLTLGLRIPNSIMANYLIKESGPLLTSSANISGLPPSTNAKDISFDLPNVDILGPVPW
PKCSGKASTIISWVNNEKWKLIREGEVFIPGIK

Specific function: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine [H]

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI2367210, Length=143, Percent_Identity=30.0699300699301, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 21525; Mature: 21525

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIANKLAVEKLNIGLPIIFHTDTLPAIGCLPKFSEIIYKIKQRDVKKPLILMGAESFQ
CCCHHHHHEEEEECCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCHH
LNEFVHKTAFEDYKYMASRYWPGPLTMIIPISEKSKPLFSNKNLTLGLRIPNSIMANYLI
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCEEEEEECCHHHHHHHHH
KESGPLLTSSANISGLPPSTNAKDISFDLPNVDILGPVPWPKCSGKASTIISWVNNEKWK
CCCCCEEECCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCHHEEEEECCCCCEE
LIREGEVFIPGIK
EEECCCEEECCCC
>Mature Secondary Structure
MNVIANKLAVEKLNIGLPIIFHTDTLPAIGCLPKFSEIIYKIKQRDVKKPLILMGAESFQ
CCCHHHHHEEEEECCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCHH
LNEFVHKTAFEDYKYMASRYWPGPLTMIIPISEKSKPLFSNKNLTLGLRIPNSIMANYLI
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCEEEEEECCHHHHHHHHH
KESGPLLTSSANISGLPPSTNAKDISFDLPNVDILGPVPWPKCSGKASTIISWVNNEKWK
CCCCCEEECCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCHHEEEEECCCCCEE
LIREGEVFIPGIK
EEECCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA