| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is glmM
Identifier: 123965509
GI number: 123965509
Start: 254046
End: 255404
Strand: Reverse
Name: glmM
Synonym: P9515_02741
Alternate gene names: 123965509
Gene position: 255404-254046 (Counterclockwise)
Preceding gene: 123965511
Following gene: 123965507
Centisome position: 14.99
GC content: 29.87
Gene sequence:
>1359_bases ATGCAATCTATATTCGGTACAGATGGAATTAGGGGGAGATTTGATAAAGAAATAACATATTCCTTAGCTTATAAAGTTGG ATATGCTTTGGGATTTATTGTGAAAACAAATAATCCAATACTAATTGGAAGAGATACAAGAATAAGTGGAGAGATTCTTT TTGAGGCAATATCAAAAGGTATTAAGGATGCCGGAAAAGAATTTATATATTTAGGAATCTGTCCTACACCAGCCATCCCA TTTTTAATAAAAAAAGAAAAATTCAGTAGTGGAATTATGATTTCAGCAAGCCACAATCCTCCAGAATTTAATGGCATTAA AATCTTTGATAAAAATGGAGAAAAAATTAAAAGAGATTTTGAAAAACGAATAGAACTGATTATGGCAAGAGTAGATAATA ATAAAATAATCACTAATAAATATAAATCGGTCAGCAAAAATAATGAACTACTAAATATCTATACCAAAGGTCTTATCGAT AGTATGGAAAATGAAAATTTAGAAGGAATGAAAATAATCTTAGATGCGTGTTATGGATCAGCGACCACATGTGCGGAGAG TGTTTTTAAGAAACTTGGTGCTAATGTCAAAGTTATTAATAATGACAAAGATGGTTTAAAAATAAATTTAAATTGCGGTT CTACATGTTTAGATCCACTAAATAAAGCCATAAAAGAAAATGATGCTGATATGGGTTTTAGCTTTGATGGTGATGCAGAT AGAGTGATTGGAGTTGATTCAAAAGGCAATATCCTAGATGGAGATCATATACTCTTTCTATGGGGCAGAGAACTTCTGGA AGAAAAAGTACTTACTAATAACACAATCATCTCAACAAGAATGGCTAATTTAGGTTTTGAAAGGAATTGGAATAATATTG GGGGTATTTTATATAGAACAGAAGTTGGAGATAAGTTCATATTTGCAGCACTAAAGGAAAAAAAAGCCTTATTAGGCGGA GAACAATCAGGTCATATACTCTCAAAAATTAATAACTTTTGCGGAGATGGTATATTAACTGCACTTCAAATTTCCAAATA CTGTAAGAAAAAAAATATTAATTTAGAATCTTGGCTTAATAGCAGCTTCTTACCATACCCCCAAAAACTTACCAATATTC TTCTGAGTTTTGACTTTAAAAACATAAACAACTCAAATAAGGATCTTATAAATGAAAGTATAGAAAGTTTTTCAAGTATT AAAAAAAATGACTGTAGAGTTTATATTCGCCCAAGTGGAACTGAACCTGTTTTACGAATATTAGTTGAAGCACAAAATCA AAAAGAAGTAGATTTTTTATCGACAAAAATCACAACCGAACTTCGTTCAAAAATCAATAAAATATCTAATAATTTATAA
Upstream 100 bases:
>100_bases AATAAATAAAGAGAAAATTAATTTTTTTACTTTTATTCAACTGATAGTATTAATGAAAGATACAAAATACTAACACTACA ATATTCATTGAAATCATAAT
Downstream 100 bases:
>100_bases ATTAAATTCTAATATAAATACTTTCATAAATTTCAAATTGACTTAATAACACGTACTTCTCTCTTTTAGTTTGTGTTTTG ATTGGATTAAAACTCTCATT
Product: phosphotransferase superclass
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MQSIFGTDGIRGRFDKEITYSLAYKVGYALGFIVKTNNPILIGRDTRISGEILFEAISKGIKDAGKEFIYLGICPTPAIP FLIKKEKFSSGIMISASHNPPEFNGIKIFDKNGEKIKRDFEKRIELIMARVDNNKIITNKYKSVSKNNELLNIYTKGLID SMENENLEGMKIILDACYGSATTCAESVFKKLGANVKVINNDKDGLKINLNCGSTCLDPLNKAIKENDADMGFSFDGDAD RVIGVDSKGNILDGDHILFLWGRELLEEKVLTNNTIISTRMANLGFERNWNNIGGILYRTEVGDKFIFAALKEKKALLGG EQSGHILSKINNFCGDGILTALQISKYCKKKNINLESWLNSSFLPYPQKLTNILLSFDFKNINNSNKDLINESIESFSSI KKNDCRVYIRPSGTEPVLRILVEAQNQKEVDFLSTKITTELRSKINKISNNL
Sequences:
>Translated_452_residues MQSIFGTDGIRGRFDKEITYSLAYKVGYALGFIVKTNNPILIGRDTRISGEILFEAISKGIKDAGKEFIYLGICPTPAIP FLIKKEKFSSGIMISASHNPPEFNGIKIFDKNGEKIKRDFEKRIELIMARVDNNKIITNKYKSVSKNNELLNIYTKGLID SMENENLEGMKIILDACYGSATTCAESVFKKLGANVKVINNDKDGLKINLNCGSTCLDPLNKAIKENDADMGFSFDGDAD RVIGVDSKGNILDGDHILFLWGRELLEEKVLTNNTIISTRMANLGFERNWNNIGGILYRTEVGDKFIFAALKEKKALLGG EQSGHILSKINNFCGDGILTALQISKYCKKKNINLESWLNSSFLPYPQKLTNILLSFDFKNINNSNKDLINESIESFSSI KKNDCRVYIRPSGTEPVLRILVEAQNQKEVDFLSTKITTELRSKINKISNNL >Mature_452_residues MQSIFGTDGIRGRFDKEITYSLAYKVGYALGFIVKTNNPILIGRDTRISGEILFEAISKGIKDAGKEFIYLGICPTPAIP FLIKKEKFSSGIMISASHNPPEFNGIKIFDKNGEKIKRDFEKRIELIMARVDNNKIITNKYKSVSKNNELLNIYTKGLID SMENENLEGMKIILDACYGSATTCAESVFKKLGANVKVINNDKDGLKINLNCGSTCLDPLNKAIKENDADMGFSFDGDAD RVIGVDSKGNILDGDHILFLWGRELLEEKVLTNNTIISTRMANLGFERNWNNIGGILYRTEVGDKFIFAALKEKKALLGG EQSGHILSKINNFCGDGILTALQISKYCKKKNINLESWLNSSFLPYPQKLTNILLSFDFKNINNSNKDLINESIESFSSI KKNDCRVYIRPSGTEPVLRILVEAQNQKEVDFLSTKITTELRSKINKISNNL
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=447, Percent_Identity=33.5570469798658, Blast_Score=233, Evalue=3e-62, Organism=Escherichia coli, GI1788361, Length=454, Percent_Identity=26.8722466960352, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1786904, Length=367, Percent_Identity=23.7057220708447, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_PROM5 (A2BUM2)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001010590.1 - ProteinModelPortal: A2BUM2 - SMR: A2BUM2 - STRING: A2BUM2 - GeneID: 4720145 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_02741 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: CRVYIRP - ProtClustDB: CLSK921784 - BioCyc: PMAR167542:P9515ORF_0284-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 50580; Mature: 50580
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 97-97
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIFGTDGIRGRFDKEITYSLAYKVGYALGFIVKTNNPILIGRDTRISGEILFEAISKG CCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHH IKDAGKEFIYLGICPTPAIPFLIKKEKFSSGIMISASHNPPEFNGIKIFDKNGEKIKRDF HHHCCCEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHH EKRIELIMARVDNNKIITNKYKSVSKNNELLNIYTKGLIDSMENENLEGMKIILDACYGS HHHHHHHHHCCCCCEEEECHHHHHCCCCCEEEEHHHHHHHHHCCCCCCHHHHEEEHHCCC ATTCAESVFKKLGANVKVINNDKDGLKINLNCGSTCLDPLNKAIKENDADMGFSFDGDAD HHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC RVIGVDSKGNILDGDHILFLWGRELLEEKVLTNNTIISTRMANLGFERNWNNIGGILYRT CEEEECCCCCEECCCCEEEEECHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCEEEEE EVGDKFIFAALKEKKALLGGEQSGHILSKINNFCGDGILTALQISKYCKKKNINLESWLN CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCC SSFLPYPQKLTNILLSFDFKNINNSNKDLINESIESFSSIKKNDCRVYIRPSGTEPVLRI CCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH LVEAQNQKEVDFLSTKITTELRSKINKISNNL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQSIFGTDGIRGRFDKEITYSLAYKVGYALGFIVKTNNPILIGRDTRISGEILFEAISKG CCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHH IKDAGKEFIYLGICPTPAIPFLIKKEKFSSGIMISASHNPPEFNGIKIFDKNGEKIKRDF HHHCCCEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHH EKRIELIMARVDNNKIITNKYKSVSKNNELLNIYTKGLIDSMENENLEGMKIILDACYGS HHHHHHHHHCCCCCEEEECHHHHHCCCCCEEEEHHHHHHHHHCCCCCCHHHHEEEHHCCC ATTCAESVFKKLGANVKVINNDKDGLKINLNCGSTCLDPLNKAIKENDADMGFSFDGDAD HHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC RVIGVDSKGNILDGDHILFLWGRELLEEKVLTNNTIISTRMANLGFERNWNNIGGILYRT CEEEECCCCCEECCCCEEEEECHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCEEEEE EVGDKFIFAALKEKKALLGGEQSGHILSKINNFCGDGILTALQISKYCKKKNINLESWLN CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCC SSFLPYPQKLTNILLSFDFKNINNSNKDLINESIESFSSIKKNDCRVYIRPSGTEPVLRI CCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH LVEAQNQKEVDFLSTKITTELRSKINKISNNL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA