| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965476
Identifier: 123965476
GI number: 123965476
Start: 223392
End: 223673
Strand: Reverse
Name: 123965476
Synonym: P9515_02411
Alternate gene names: NA
Gene position: 223673-223392 (Counterclockwise)
Preceding gene: 123965477
Following gene: 123965474
Centisome position: 13.12
GC content: 34.4
Gene sequence:
>282_bases ATGAAAAGATTAGATTTAATTTTTAGTGAAAGAGAACTTGATGCAATTATCGATACATTAGAGAAAGCTAATGTCCCGGG ATATACAATTATGAAACATGCAACTGGAAGAGGGCCAGAAAGATTTGTTACAGAAGATATGGAATTTACTGGATTAGGTT CAAACGCTCATGTAATAGTTTTCTGTGAGCAAGAATTAATTGATCAAATGCGCGACAATATCAAGTCAGATTTAAGTTAT TACGGCGGAGTAGCTTATATCTCTGAAGCCACACCTCTATAA
Upstream 100 bases:
>100_bases TACTACATTAGGCTTAACTTTTCCGTTTAATATAGTTCTAGGTATTCCTATTTATATGAGTTTAGTAAATAAAATCATTC CAATTACCCCTTTGTAAAAG
Downstream 100 bases:
>100_bases TTTTTCACTCTATCAATATTTCAAGAGTGTATCCAATCTACTCTTATATTTTTTCTACTATTTAAATATCGATCGATAGA CATTGCTGCTATGCATCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MKRLDLIFSERELDAIIDTLEKANVPGYTIMKHATGRGPERFVTEDMEFTGLGSNAHVIVFCEQELIDQMRDNIKSDLSY YGGVAYISEATPL
Sequences:
>Translated_93_residues MKRLDLIFSERELDAIIDTLEKANVPGYTIMKHATGRGPERFVTEDMEFTGLGSNAHVIVFCEQELIDQMRDNIKSDLSY YGGVAYISEATPL >Mature_93_residues MKRLDLIFSERELDAIIDTLEKANVPGYTIMKHATGRGPERFVTEDMEFTGLGSNAHVIVFCEQELIDQMRDNIKSDLSY YGGVAYISEATPL
Specific function: Unknown
COG id: COG0347
COG function: function code E; Nitrogen regulatory protein PII
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10487; Mature: 10487
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLDLIFSERELDAIIDTLEKANVPGYTIMKHATGRGPERFVTEDMEFTGLGSNAHVIV CCCCHHEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCEEECCCCCEEEE FCEQELIDQMRDNIKSDLSYYGGVAYISEATPL EECHHHHHHHHHHHHHHHHHCCCEEEECCCCCC >Mature Secondary Structure MKRLDLIFSERELDAIIDTLEKANVPGYTIMKHATGRGPERFVTEDMEFTGLGSNAHVIV CCCCHHEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCEEECCCCCEEEE FCEQELIDQMRDNIKSDLSYYGGVAYISEATPL EECHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA